RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 CABP4P57796 275 aa7.44□□□□□ -1.22
KNTC1-209ENST00000536625 CPSF6Q16630 551 aaKnown RBP eCLIP7.44□□□□□ -1.22
KNTC1-209ENST00000536625 TMPRSS13Q9BYE2 586 aa7.44□□□□□ -1.22
KNTC1-209ENST00000536625 KRTAP4-11Q9BYQ6 195 aa7.44□□□□□ -1.22
KNTC1-209ENST00000536625 PAK6Q9NQU5 681 aaPredicted RBP7.44□□□□□ -1.22
KNTC1-209ENST00000536625 SOX13Q9UN79 622 aa7.44□□□□□ -1.22
KNTC1-209ENST00000536625 IVNS1ABPQ9Y6Y0 642 aa7.44□□□□□ -1.22
KNTC1-209ENST00000536625 FAM95CA0A1B0GW59 222 aa7.43□□□□□ -1.22
KNTC1-209ENST00000536625 TNFRSF21O75509 655 aa7.43□□□□□ -1.22
KNTC1-209ENST00000536625 PAPLNO95428 1278 aa7.43□□□□□ -1.22
KNTC1-209ENST00000536625 PCSK2P16519 638 aa7.43□□□□□ -1.22
KNTC1-209ENST00000536625 USP5P45974 858 aa7.43□□□□□ -1.22
KNTC1-209ENST00000536625 NFKBIBQ15653 356 aa7.43□□□□□ -1.22
KNTC1-209ENST00000536625 ZNF648Q5T619 568 aaPredicted RBP7.43□□□□□ -1.22
KNTC1-209ENST00000536625 CDPF1Q6NVV7 123 aa7.43□□□□□ -1.22
KNTC1-209ENST00000536625 C12orf50Q8NA57 414 aaPredicted RBP7.43□□□□□ -1.22
KNTC1-209ENST00000536625 SMG8Q8ND04 991 aaKnown RBP7.43□□□□□ -1.22
KNTC1-209ENST00000536625 FBLIM1Q8WUP2 373 aa7.43□□□□□ -1.22
KNTC1-209ENST00000536625 BSDC1Q9NW68 430 aaPredicted RBP7.43□□□□□ -1.22
KNTC1-209ENST00000536625 CYP26A1O43174 497 aa7.42□□□□□ -1.22
KNTC1-209ENST00000536625 DRD2P14416 443 aa7.42□□□□□ -1.22
KNTC1-209ENST00000536625 C19orf57Q0VDD7 668 aa7.42□□□□□ -1.22
KNTC1-209ENST00000536625 NUTM2GQ5VZR2 741 aa7.42□□□□□ -1.22
KNTC1-209ENST00000536625 FLCNQ8NFG4 579 aa7.42□□□□□ -1.22
KNTC1-209ENST00000536625 FAM129BQ96TA1 746 aa7.42□□□□□ -1.22
KNTC1-209ENST00000536625 DZANK1Q9NVP4 752 aa7.42□□□□□ -1.22
KNTC1-209ENST00000536625 FOXD3Q9UJU5 478 aaPredicted RBP7.42□□□□□ -1.22
KNTC1-209ENST00000536625 FAM170BA6NMN3 283 aa7.41□□□□□ -1.22
KNTC1-209ENST00000536625 SOX1O00570 391 aaPredicted RBP7.41□□□□□ -1.22
KNTC1-209ENST00000536625 EHHADHQ08426 723 aa7.41□□□□□ -1.22
KNTC1-209ENST00000536625 ZNF124Q15973 351 aa7.41□□□□□ -1.22
KNTC1-209ENST00000536625 FAM9AQ8IZU1 332 aaPredicted RBP7.41□□□□□ -1.22
KNTC1-209ENST00000536625 GATA6Q92908 595 aa7.41□□□□□ -1.22
KNTC1-209ENST00000536625 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
KNTC1-209ENST00000536625 BRPF3Q9ULD4 1205 aa7.41□□□□□ -1.22
KNTC1-209ENST00000536625 LOC100289279A0A1B0GTE1 492 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 PDE2AO00408 941 aaPredicted RBP7.4□□□□□ -1.22
KNTC1-209ENST00000536625 PAOXQ6QHF9 649 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 SPOCD1Q6ZMY3 1216 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 ZAR1Q86SH2 424 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 TBC1D32Q96NH3 1257 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 CITED4Q96RK1 184 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 METTL22Q9BUU2 404 aaPredicted RBP7.4□□□□□ -1.22
KNTC1-209ENST00000536625 RBCK1Q9BYM8 510 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 ZFYVE28Q9HCC9 887 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 PRKAG2Q9UGJ0 569 aa7.4□□□□□ -1.22
KNTC1-209ENST00000536625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
KNTC1-209ENST00000536625 CARMIL2Q6F5E8 1435 aa7.39□□□□□ -1.23
KNTC1-209ENST00000536625 EREGO14944 169 aa7.39□□□□□ -1.23
KNTC1-209ENST00000536625 GPR182O15218 404 aa7.39□□□□□ -1.23
KNTC1-209ENST00000536625 VN1R5Q7Z5H4 357 aa7.39□□□□□ -1.23
KNTC1-209ENST00000536625 C2CD4AQ8NCU7 369 aaPredicted RBP7.39□□□□□ -1.23
KNTC1-209ENST00000536625 USP26Q9BXU7 913 aa7.39□□□□□ -1.23
KNTC1-209ENST00000536625 ZC3H7BQ9UGR2 993 aaKnown RBP7.39□□□□□ -1.23
KNTC1-209ENST00000536625 NDUFB5O43674 189 aa7.38□□□□□ -1.23
KNTC1-209ENST00000536625 PDIA4P13667 645 aaKnown RBP7.38□□□□□ -1.23
KNTC1-209ENST00000536625 CES1P23141 567 aa7.38□□□□□ -1.23
KNTC1-209ENST00000536625 FBLN7Q53RD9 439 aa7.38□□□□□ -1.23
KNTC1-209ENST00000536625 WFDC3Q8IUB2 231 aa7.38□□□□□ -1.23
KNTC1-209ENST00000536625 CYP4F12Q9HCS2 524 aa7.38□□□□□ -1.23
KNTC1-209ENST00000536625 KRTAP9-7A8MTY7 169 aa7.37□□□□□ -1.23
KNTC1-209ENST00000536625 PHACTR2O75167 634 aa7.37□□□□□ -1.23
KNTC1-209ENST00000536625 ARL4DP49703 201 aa7.37□□□□□ -1.23
KNTC1-209ENST00000536625 USP11P51784 963 aa7.37□□□□□ -1.23
KNTC1-209ENST00000536625 PEAR1Q5VY43 1037 aaPredicted RBP7.37□□□□□ -1.23
KNTC1-209ENST00000536625 AGBL5Q8NDL9 886 aa7.37□□□□□ -1.23
KNTC1-209ENST00000536625 TTC16Q8NEE8 873 aa7.37□□□□□ -1.23
KNTC1-209ENST00000536625 SNX29Q8TEQ0 813 aa7.37□□□□□ -1.23
KNTC1-209ENST00000536625 EZH1Q92800 747 aaPredicted RBP7.37□□□□□ -1.23
KNTC1-209ENST00000536625 PMEPA1Q969W9 287 aa7.37□□□□□ -1.23
KNTC1-209ENST00000536625 IKBKEQ14164 716 aa7.36□□□□□ -1.23
KNTC1-209ENST00000536625 USPL1Q5W0Q7 1092 aa7.36□□□□□ -1.23
KNTC1-209ENST00000536625 ZNF574Q6ZN55 896 aaPredicted RBP7.36□□□□□ -1.23
KNTC1-209ENST00000536625 TMC7Q7Z402 723 aa7.36□□□□□ -1.23
KNTC1-209ENST00000536625 TMEM102Q8N9M5 508 aaPredicted RBP7.36□□□□□ -1.23
KNTC1-209ENST00000536625 LRRC4CQ9HCJ2 640 aa7.36□□□□□ -1.23
KNTC1-209ENST00000536625 LATS2Q9NRM7 1088 aa7.36□□□□□ -1.23
KNTC1-209ENST00000536625 POLR3DP05423 398 aaPredicted RBP7.35□□□□□ -1.23
KNTC1-209ENST00000536625 ORC1Q13415 861 aa7.35□□□□□ -1.23
KNTC1-209ENST00000536625 NXPE3Q969Y0 559 aa7.35□□□□□ -1.23
KNTC1-209ENST00000536625 NIF3L1Q9GZT8 377 aa7.35□□□□□ -1.23
KNTC1-209ENST00000536625 BIN2Q9UBW5 565 aaPredicted RBP7.35□□□□□ -1.23
KNTC1-209ENST00000536625 DCTN4Q9UJW0 460 aa7.35□□□□□ -1.23
KNTC1-209ENST00000536625 DBX1A6NMT0 343 aa7.34□□□□□ -1.23
KNTC1-209ENST00000536625 SOX4Q06945 474 aaPredicted RBP7.34□□□□□ -1.23
KNTC1-209ENST00000536625 PDE3BQ13370 1112 aa7.34□□□□□ -1.23
KNTC1-209ENST00000536625 DSC3Q14574 896 aa7.34□□□□□ -1.23
KNTC1-209ENST00000536625 EXOSC6Q5RKV6 272 aaKnown RBP7.34□□□□□ -1.23
KNTC1-209ENST00000536625 ZNF765Q7L2R6 523 aa7.34□□□□□ -1.23
KNTC1-209ENST00000536625 AEBP1Q8IUX7 1158 aa7.34□□□□□ -1.23
KNTC1-209ENST00000536625 GALNT12Q8IXK2 581 aa7.34□□□□□ -1.23
KNTC1-209ENST00000536625 BSNDQ8WZ55 320 aa7.34□□□□□ -1.23
KNTC1-209ENST00000536625 ALKBH8Q96BT7 664 aaKnown RBP7.34□□□□□ -1.23
KNTC1-209ENST00000536625 ZKSCAN3Q9BRR0 538 aa7.34□□□□□ -1.23
KNTC1-209ENST00000536625 ZNF792Q3KQV3 632 aa7.33□□□□□ -1.24
KNTC1-209ENST00000536625 SPRED2Q7Z698 418 aa7.33□□□□□ -1.24
KNTC1-209ENST00000536625 BCL7CQ8WUZ0 217 aaPredicted RBP7.33□□□□□ -1.24
KNTC1-209ENST00000536625 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
KNTC1-209ENST00000536625 AMOTL2Q9Y2J4 779 aa7.33□□□□□ -1.24
KNTC1-209ENST00000536625 NFICP08651 508 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms