RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 PATL2C9JE40 543 aaKnown RBP9.66□□□□□ -0.86
ABCA4-207ENST00000536513 JAK2O60674 1132 aa9.66□□□□□ -0.86
ABCA4-207ENST00000536513 EIF6P56537 245 aaKnown RBP9.66□□□□□ -0.86
ABCA4-207ENST00000536513 TMED8Q6PL24 325 aaPredicted RBP9.66□□□□□ -0.86
ABCA4-207ENST00000536513 STK32BQ9NY57 414 aa9.66□□□□□ -0.86
ABCA4-207ENST00000536513 LIMCH1Q9UPQ0 1083 aa9.66□□□□□ -0.86
ABCA4-207ENST00000536513 U3KPZ7 1027 aaPredicted RBP9.66□□□□□ -0.86
ABCA4-207ENST00000536513 HSPA4P34932 840 aa9.66□□□□□ -0.86
ABCA4-207ENST00000536513 TCP10Q12799 353 aa9.66□□□□□ -0.86
ABCA4-207ENST00000536513 GYS1P13807 737 aa9.66□□□□□ -0.86
ABCA4-207ENST00000536513 KIAA0825Q8IV33 1275 aa9.66□□□□□ -0.86
ABCA4-207ENST00000536513 BAZ2BQ9UIF8 2168 aaKnown RBP9.65□□□□□ -0.86
ABCA4-207ENST00000536513 CACNB3P54284 484 aa9.65□□□□□ -0.86
ABCA4-207ENST00000536513 TRIM28Q13263 835 aaKnown RBP9.65□□□□□ -0.86
ABCA4-207ENST00000536513 FAM177A1Q8N128 213 aaPredicted RBP9.65□□□□□ -0.86
ABCA4-207ENST00000536513 PROM2Q8N271 834 aa9.65□□□□□ -0.86
ABCA4-207ENST00000536513 RBM27Q9P2N5 1060 aaKnown RBP9.65□□□□□ -0.86
ABCA4-207ENST00000536513 LTBP4Q8N2S1 1624 aa9.65□□□□□ -0.86
ABCA4-207ENST00000536513 GOLGA8BA8MQT2 603 aa9.65□□□□□ -0.86
ABCA4-207ENST00000536513 IFIT3O14879 490 aaKnown RBP9.65□□□□□ -0.86
ABCA4-207ENST00000536513 CSF1RP07333 972 aa9.65□□□□□ -0.86
ABCA4-207ENST00000536513 GJB4Q9NTQ9 266 aa9.65□□□□□ -0.86
ABCA4-207ENST00000536513 ZNF804BA4D1E1 1349 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 UTYO14607 1347 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 KLF18A0A0U1RQI7 1052 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 POLR3DP05423 398 aaPredicted RBP9.65□□□□□ -0.87
ABCA4-207ENST00000536513 RUFY3Q7L099 469 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 TICAM2Q86XR7 235 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 MAPKAPK5Q8IW41 473 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 LCORLQ8N3X6 602 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 NACAP1Q9BZK3 213 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 MCM9Q9NXL9 1143 aa9.65□□□□□ -0.87
ABCA4-207ENST00000536513 CGNQ9P2M7 1197 aaKnown RBP9.65□□□□□ -0.87
ABCA4-207ENST00000536513 MROH5Q6ZUA9 1318 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 UQCRFS1P1P0C7P4 283 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 ME3Q16798 604 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 FAM47AQ5JRC9 791 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 TPCN1Q9ULQ1 816 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 SALL3Q9BXA9 1300 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 ERICH2A1L162 156 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 C21orf2O43822 256 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 DPP8Q6V1X1 898 aaPredicted RBP9.64□□□□□ -0.87
ABCA4-207ENST00000536513 C2CD5Q86YS7 1000 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 STX8Q9UNK0 236 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 MAGEB6P1A0A0J9YX57 407 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 MPHOSPH10O00566 681 aaKnown RBP9.64□□□□□ -0.87
ABCA4-207ENST00000536513 CLSTN1O94985 981 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 ZSCAN25Q6NSZ9 544 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 SYNE3Q6ZMZ3 975 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 APPBP2Q92624 585 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 VAT1LQ9HCJ6 419 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 GGA1Q9UJY5 639 aa9.64□□□□□ -0.87
ABCA4-207ENST00000536513 USP42Q9H9J4 1324 aaKnown RBP9.63□□□□□ -0.87
ABCA4-207ENST00000536513 PRC1O43663 620 aa9.63□□□□□ -0.87
ABCA4-207ENST00000536513 R3HDM1Q15032 1099 aaKnown RBP9.63□□□□□ -0.87
ABCA4-207ENST00000536513 ZRSR1Q15695 479 aaKnown RBP9.63□□□□□ -0.87
ABCA4-207ENST00000536513 MFSD14BQ5SR56 506 aa9.63□□□□□ -0.87
ABCA4-207ENST00000536513 CLEC4GQ6UXB4 293 aa9.63□□□□□ -0.87
ABCA4-207ENST00000536513 PIAS4Q8N2W9 510 aaPredicted RBP9.63□□□□□ -0.87
ABCA4-207ENST00000536513 SYAP1Q96A49 352 aaPredicted RBP9.63□□□□□ -0.87
ABCA4-207ENST00000536513 UBAC1Q9BSL1 405 aa9.63□□□□□ -0.87
ABCA4-207ENST00000536513 CCDC39Q9UFE4 941 aa9.63□□□□□ -0.87
ABCA4-207ENST00000536513 BAG6P46379 1132 aa9.63□□□□□ -0.87
ABCA4-207ENST00000536513 DDR1Q08345 913 aa9.63□□□□□ -0.87
ABCA4-207ENST00000536513 MKNK2Q9HBH9 465 aa9.63□□□□□ -0.87
ABCA4-207ENST00000536513 USP17L12C9JPN9 530 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 USP17L21D6R901 530 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 E7EWF7 191 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
ABCA4-207ENST00000536513 SLURP2P0DP57 97 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 EVX2Q03828 476 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 TTF1Q15361 905 aaPredicted RBP9.62□□□□□ -0.87
ABCA4-207ENST00000536513 TMEM67Q5HYA8 995 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 TGFBRAP1Q8WUH2 860 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 FAM84BQ96KN1 310 aaPredicted RBP9.62□□□□□ -0.87
ABCA4-207ENST00000536513 PLCD4Q9BRC7 762 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.62□□□□□ -0.87
ABCA4-207ENST00000536513 CIAO1O76071 339 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 SF3A1Q15459 793 aaKnown RBP9.62□□□□□ -0.87
ABCA4-207ENST00000536513 MFSD6Q6ZSS7 791 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 MAP4K1Q92918 833 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 PHKBQ93100 1093 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 RBM17Q96I25 401 aaKnown RBP9.62□□□□□ -0.87
ABCA4-207ENST00000536513 OFD1O75665 1012 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
ABCA4-207ENST00000536513 GPSM2P81274 684 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 UIMC1Q96RL1 719 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 CTNNA3Q9UI47 895 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 BCS1LQ9Y276 419 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 LMO7Q8WWI1 1683 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 SLIT2O94813 1529 aa9.62□□□□□ -0.87
ABCA4-207ENST00000536513 CCDC69A6NI79 296 aa9.61□□□□□ -0.87
ABCA4-207ENST00000536513 FAM196BA6NMK8 535 aa9.61□□□□□ -0.87
ABCA4-207ENST00000536513 H0YIN7 160 aa9.61□□□□□ -0.87
ABCA4-207ENST00000536513 CYP2D6P10635 497 aa9.61□□□□□ -0.87
ABCA4-207ENST00000536513 NUCB2P80303 420 aa9.61□□□□□ -0.87
ABCA4-207ENST00000536513 CAMK4Q16566 473 aa9.61□□□□□ -0.87
ABCA4-207ENST00000536513 CNPY2Q9Y2B0 182 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms