RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TDRD7Q8NHU6 1098 aaKnown RBP15.58■□□□□ 0.08
PRKDC-207ENST00000536483 FAM84BQ96KN1 310 aaPredicted RBP15.58■□□□□ 0.08
PRKDC-207ENST00000536483 PUS3Q9BZE2 481 aaKnown RBP15.58■□□□□ 0.08
PRKDC-207ENST00000536483 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
PRKDC-207ENST00000536483 TTF2Q9UNY4 1162 aaKnown RBP15.58■□□□□ 0.08
PRKDC-207ENST00000536483 MROH5Q6ZUA9 1318 aa15.58■□□□□ 0.08
PRKDC-207ENST00000536483 UNCXA6NJT0 531 aa15.57■□□□□ 0.08
PRKDC-207ENST00000536483 HIBADHP31937 336 aaKnown RBP15.57■□□□□ 0.08
PRKDC-207ENST00000536483 GJA5P36382 358 aa15.57■□□□□ 0.08
PRKDC-207ENST00000536483 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
PRKDC-207ENST00000536483 VGLL2Q8N8G2 317 aa15.57■□□□□ 0.08
PRKDC-207ENST00000536483 TDRD3Q9H7E2 651 aaKnown RBP15.57■□□□□ 0.08
PRKDC-207ENST00000536483 ZNF70Q9UC06 446 aaPredicted RBP15.57■□□□□ 0.08
PRKDC-207ENST00000536483 TRIM17Q9Y577 477 aa15.57■□□□□ 0.08
PRKDC-207ENST00000536483 ECM29Q5VYK3 1845 aa15.57■□□□□ 0.08
PRKDC-207ENST00000536483 BCAR3O75815 825 aa15.56■□□□□ 0.08
PRKDC-207ENST00000536483 TRIM27P14373 513 aa15.56■□□□□ 0.08
PRKDC-207ENST00000536483 SPDYE2Q495Y8 402 aa15.56■□□□□ 0.08
PRKDC-207ENST00000536483 PRPF38BQ5VTL8 546 aaKnown RBP15.56■□□□□ 0.08
PRKDC-207ENST00000536483 ANKRD13AQ8IZ07 590 aa15.56■□□□□ 0.08
PRKDC-207ENST00000536483 SERPINA10Q9UK55 444 aa15.56■□□□□ 0.08
PRKDC-207ENST00000536483 HTTP42858 3142 aa15.56■□□□□ 0.08
PRKDC-207ENST00000536483 CENPFP49454 3210 aa15.56■□□□□ 0.08
PRKDC-207ENST00000536483 UBTFL1P0CB47 393 aaPredicted RBP15.55■□□□□ 0.08
PRKDC-207ENST00000536483 TNFAIP1Q13829 316 aa15.55■□□□□ 0.08
PRKDC-207ENST00000536483 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
PRKDC-207ENST00000536483 DZIP1LQ8IYY4 767 aaKnown RBP15.55■□□□□ 0.08
PRKDC-207ENST00000536483 MKI67P46013 3256 aaKnown RBP15.54■□□□□ 0.08
PRKDC-207ENST00000536483 ZBTB22O15209 634 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 PDE8BO95263 885 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 GNAI3P08754 354 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 CRKP46108 304 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 CRHR2Q13324 411 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 MTX1Q13505 466 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 LRRC24Q50LG9 513 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 OTUD7BQ6GQQ9 843 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 OTOP1Q7RTM1 612 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 PTPN18Q99952 460 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 ELP3Q9H9T3 547 aa15.54■□□□□ 0.08
PRKDC-207ENST00000536483 IQSEC3Q9UPP2 1182 aaPredicted RBP15.54■□□□□ 0.08
PRKDC-207ENST00000536483 TCP10L2B9ZVM9 353 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 EYA2O00167 538 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 FGFR2P21802 821 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 GRIK5Q16478 980 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 FBXO33Q7Z6M2 555 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 VPS37DQ86XT2 251 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 OPTNQ96CV9 577 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 TEPSINQ96N21 525 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 MEIS3Q99687 375 aa15.53■□□□□ 0.08
PRKDC-207ENST00000536483 BRCA2P51587 3418 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 TESPA1A2RU30 521 aaPredicted RBP15.52■□□□□ 0.08
PRKDC-207ENST00000536483 CIAO1O76071 339 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 CHAF1AQ13111 956 aaPredicted RBP15.52■□□□□ 0.08
PRKDC-207ENST00000536483 ZKSCAN2Q63HK3 967 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.52■□□□□ 0.08
PRKDC-207ENST00000536483 ATG9AQ7Z3C6 839 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 CD99L2Q8TCZ2 262 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 ERO1AQ96HE7 468 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 TMEM39BQ9GZU3 492 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 COPRSQ9NQ92 184 aa15.52■□□□□ 0.08
PRKDC-207ENST00000536483 FRAT2O75474 233 aaPredicted RBP15.51■□□□□ 0.07
PRKDC-207ENST00000536483 METTL24Q5JXM2 366 aa15.51■□□□□ 0.07
PRKDC-207ENST00000536483 KLHDC4Q8TBB5 520 aa15.51■□□□□ 0.07
PRKDC-207ENST00000536483 MS4A4AQ96JQ5 239 aa15.51■□□□□ 0.07
PRKDC-207ENST00000536483 PTPN22Q9Y2R2 807 aa15.51■□□□□ 0.07
PRKDC-207ENST00000536483 LRRFIP2Q9Y608 721 aaKnown RBP15.51■□□□□ 0.07
PRKDC-207ENST00000536483 TNNI2P48788 182 aa15.5■□□□□ 0.07
PRKDC-207ENST00000536483 MAP3K9P80192 1104 aa15.5■□□□□ 0.07
PRKDC-207ENST00000536483 CAP1Q01518 475 aa15.5■□□□□ 0.07
PRKDC-207ENST00000536483 SP3Q02447 781 aa15.5■□□□□ 0.07
PRKDC-207ENST00000536483 VGLL4Q14135 290 aa15.5■□□□□ 0.07
PRKDC-207ENST00000536483 CAVIN4Q5BKX8 364 aa15.5■□□□□ 0.07
PRKDC-207ENST00000536483 EFCC1Q9HA90 598 aa15.5■□□□□ 0.07
PRKDC-207ENST00000536483 LAMB1P07942 1786 aa15.49■□□□□ 0.07
PRKDC-207ENST00000536483 POTEFA5A3E0 1075 aa15.49■□□□□ 0.07
PRKDC-207ENST00000536483 CACNB3P54284 484 aa15.49■□□□□ 0.07
PRKDC-207ENST00000536483 PUM3Q15397 648 aaKnown RBP15.49■□□□□ 0.07
PRKDC-207ENST00000536483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.49■□□□□ 0.07
PRKDC-207ENST00000536483 TBC1D22AQ8WUA7 517 aa15.49■□□□□ 0.07
PRKDC-207ENST00000536483 BRI3BPQ8WY22 251 aa15.49■□□□□ 0.07
PRKDC-207ENST00000536483 OTOFQ9HC10 1997 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 CCL15-CCL14A0A0B4J2E2 113 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 IL15P40933 162 aaPredicted RBP15.48■□□□□ 0.07
PRKDC-207ENST00000536483 BCAMP50895 628 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 HDLBPQ00341 1268 aaKnown RBP15.48■□□□□ 0.07
PRKDC-207ENST00000536483 CCL15Q16663 113 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 LPIN2Q92539 896 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 FRAT1Q92837 279 aaPredicted RBP15.48■□□□□ 0.07
PRKDC-207ENST00000536483 TEKT1Q969V4 418 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 PCDH10Q9P2E7 1040 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 TNNQ9UQP3 1299 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 CSADQ9Y600 493 aa15.48■□□□□ 0.07
PRKDC-207ENST00000536483 GNAI2P04899 355 aa15.47■□□□□ 0.07
PRKDC-207ENST00000536483 GTF2A2P52657 109 aa15.47■□□□□ 0.07
PRKDC-207ENST00000536483 TAF1CQ15572 869 aaPredicted RBP15.47■□□□□ 0.07
PRKDC-207ENST00000536483 TMEM57Q8N5G2 664 aa15.47■□□□□ 0.07
PRKDC-207ENST00000536483 ARAP2Q8WZ64 1704 aa15.46■□□□□ 0.07
PRKDC-207ENST00000536483 KIAA0100Q14667 2235 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms