RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TCRBV5S4A2TA0A5A2 114 aa13.89□□□□□ -0.19
CDCA3-206ENST00000536241 FZD9O00144 591 aa13.89□□□□□ -0.19
CDCA3-206ENST00000536241 CYP7A1P22680 504 aa13.89□□□□□ -0.19
CDCA3-206ENST00000536241 FKBP1AP62942 108 aaKnown RBP13.89□□□□□ -0.19
CDCA3-206ENST00000536241 CIAPIN1Q6FI81 312 aa13.89□□□□□ -0.19
CDCA3-206ENST00000536241 NAA16Q6N069 864 aaPredicted RBP13.89□□□□□ -0.19
CDCA3-206ENST00000536241 RUFY2Q8WXA3 655 aa13.89□□□□□ -0.19
CDCA3-206ENST00000536241 ESYT1Q9BSJ8 1104 aa13.89□□□□□ -0.19
CDCA3-206ENST00000536241 PUS7LQ9H0K6 701 aaKnown RBP13.89□□□□□ -0.19
CDCA3-206ENST00000536241 EIF6P56537 245 aaKnown RBP13.88□□□□□ -0.19
CDCA3-206ENST00000536241 MCMDC2Q4G0Z9 681 aa13.88□□□□□ -0.19
CDCA3-206ENST00000536241 ADGRA1Q86SQ6 560 aa13.88□□□□□ -0.19
CDCA3-206ENST00000536241 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
CDCA3-206ENST00000536241 KIAA0825Q8IV33 1275 aa13.88□□□□□ -0.19
CDCA3-206ENST00000536241 APPBP2Q92624 585 aa13.88□□□□□ -0.19
CDCA3-206ENST00000536241 HELLSQ9NRZ9 838 aa13.88□□□□□ -0.19
CDCA3-206ENST00000536241 RNF181Q9P0P0 153 aa13.88□□□□□ -0.19
CDCA3-206ENST00000536241 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
CDCA3-206ENST00000536241 SUGT1Q9Y2Z0 365 aa13.88□□□□□ -0.19
CDCA3-206ENST00000536241 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-206ENST00000536241 GOLGB1Q14789 3259 aaKnown RBP13.88□□□□□ -0.19
CDCA3-206ENST00000536241 RFX7Q2KHR2 1363 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 SGSM2O43147 1006 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 SCNN1DP51172 638 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 TNIP1Q15025 636 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 C9orf131Q5VYM1 1079 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 RSBN1LQ6PCB5 846 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-206ENST00000536241 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 SBF1O95248 1867 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 M0R2C6 588 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 IGSF3O75054 1194 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 LDHCP07864 332 aa13.87□□□□□ -0.19
CDCA3-206ENST00000536241 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-206ENST00000536241 SRCAPQ6ZRS2 3230 aa13.86□□□□□ -0.19
CDCA3-206ENST00000536241 DOCK2Q92608 1830 aa13.86□□□□□ -0.19
CDCA3-206ENST00000536241 MFAP1P55081 439 aaKnown RBP13.86□□□□□ -0.19
CDCA3-206ENST00000536241 GSTO1P78417 241 aa13.86□□□□□ -0.19
CDCA3-206ENST00000536241 MIGA1Q8NAN2 632 aa13.86□□□□□ -0.19
CDCA3-206ENST00000536241 GMLQ99445 158 aa13.86□□□□□ -0.19
CDCA3-206ENST00000536241 GJA3Q9Y6H8 435 aa13.86□□□□□ -0.19
CDCA3-206ENST00000536241 MAST3O60307 1309 aa13.85□□□□□ -0.19
CDCA3-206ENST00000536241 DYNLL1P63167 89 aaKnown RBP13.85□□□□□ -0.19
CDCA3-206ENST00000536241 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
CDCA3-206ENST00000536241 SLF2Q8IX21 1173 aa13.85□□□□□ -0.19
CDCA3-206ENST00000536241 AGBL3Q8NEM8 1001 aa13.85□□□□□ -0.19
CDCA3-206ENST00000536241 FAM163AQ96GL9 167 aaPredicted RBP13.85□□□□□ -0.19
CDCA3-206ENST00000536241 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
CDCA3-206ENST00000536241 MYH7P12883 1935 aa13.84□□□□□ -0.19
CDCA3-206ENST00000536241 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
CDCA3-206ENST00000536241 ZNF541Q9H0D2 1346 aa13.84□□□□□ -0.19
CDCA3-206ENST00000536241 MAGEB6P1A0A0J9YX57 407 aa13.84□□□□□ -0.19
CDCA3-206ENST00000536241 GPAA1O43292 621 aa13.84□□□□□ -0.19
CDCA3-206ENST00000536241 TMED8Q6PL24 325 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-206ENST00000536241 AIDAQ96BJ3 306 aa13.84□□□□□ -0.19
CDCA3-206ENST00000536241 STRBPQ96SI9 672 aaKnown RBP13.84□□□□□ -0.19
CDCA3-206ENST00000536241 MRIQ9BWK5 157 aa13.84□□□□□ -0.19
CDCA3-206ENST00000536241 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDCA3-206ENST00000536241 DICER1Q9UPY3 1922 aaKnown RBP13.83□□□□□ -0.2
CDCA3-206ENST00000536241 REC8O95072 547 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 MBD4O95243 580 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 CRKP46108 304 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 RBM5P52756 815 aaKnown RBP eCLIP13.83□□□□□ -0.2
CDCA3-206ENST00000536241 PTH1RQ03431 593 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 VPS53Q5VIR6 699 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 HHIPL2Q6UWX4 724 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 LCORLQ8N3X6 602 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
CDCA3-206ENST00000536241 USP26Q9BXU7 913 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 PCDHAC2Q9Y5I4 1007 aa13.83□□□□□ -0.2
CDCA3-206ENST00000536241 MROH7-TTC4A0A0A0MT08 1334 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 RAD50Q92878 1312 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 GPR75-ASB3A0A0A6YYF3 556 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 PRKAB2O43741 272 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 DDNO94850 711 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-206ENST00000536241 BAG3O95817 575 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 USP17L8P0C7I0 530 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 PPP4CP60510 307 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 HDLBPQ00341 1268 aaKnown RBP13.82□□□□□ -0.2
CDCA3-206ENST00000536241 OGFOD1Q8N543 542 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 TEKT1Q969V4 418 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 LSG1Q9H089 658 aaKnown RBP13.82□□□□□ -0.2
CDCA3-206ENST00000536241 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 DAGLAQ9Y4D2 1042 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 MYH2Q9UKX2 1941 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 ZNF646O15015 1829 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-206ENST00000536241 PSME4Q14997 1843 aa13.82□□□□□ -0.2
CDCA3-206ENST00000536241 SHTN1A0MZ66 631 aa13.81□□□□□ -0.2
CDCA3-206ENST00000536241 HSPD1P10809 573 aaKnown RBP13.81□□□□□ -0.2
CDCA3-206ENST00000536241 RPS12P25398 132 aaKnown RBP13.81□□□□□ -0.2
CDCA3-206ENST00000536241 BTDP43251 543 aa13.81□□□□□ -0.2
CDCA3-206ENST00000536241 GMPSP49915 693 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-206ENST00000536241 APOBEC3HQ6NTF7 200 aaKnown RBP13.81□□□□□ -0.2
CDCA3-206ENST00000536241 GPC2Q8N158 579 aa13.81□□□□□ -0.2
CDCA3-206ENST00000536241 DPF2Q92785 391 aa13.81□□□□□ -0.2
CDCA3-206ENST00000536241 NOL10Q9BSC4 688 aaKnown RBP13.81□□□□□ -0.2
CDCA3-206ENST00000536241 CNOT7Q9UIV1 285 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms