RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
LIG1-203ENST00000536218 ITGA6P23229 1130 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 GJB2P29033 226 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 METTL24Q5JXM2 366 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 TTC39AQ5SRH9 613 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 UBXN4Q92575 508 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 XAGE2Q96GT9 111 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 CNNM1Q9NRU3 951 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 DACT1Q9NYF0 836 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 MED23Q9ULK4 1368 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 ZNF609O15014 1411 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 GOLGA6L19H0YKK7 550 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
LIG1-203ENST00000536218 HSP90AB3PQ58FF7 597 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 TM6SF1Q9BZW5 370 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 ROBO1Q9Y6N7 1651 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 FAM173BQ6P4H8 233 aa16.2■□□□□ 0.18
LIG1-203ENST00000536218 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.2■□□□□ 0.18
LIG1-203ENST00000536218 KCNQ4P56696 695 aa16.19■□□□□ 0.18
LIG1-203ENST00000536218 SNW1Q13573 536 aaKnown RBP16.19■□□□□ 0.18
LIG1-203ENST00000536218 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
LIG1-203ENST00000536218 CCDC158Q5M9N0 1113 aa16.19■□□□□ 0.18
LIG1-203ENST00000536218 MARCH10Q8NA82 808 aaPredicted RBP16.19■□□□□ 0.18
LIG1-203ENST00000536218 AK7Q96M32 723 aa16.19■□□□□ 0.18
LIG1-203ENST00000536218 UBR2Q8IWV8 1755 aa16.19■□□□□ 0.18
LIG1-203ENST00000536218 CCAR2Q8N163 923 aaKnown RBP16.19■□□□□ 0.18
LIG1-203ENST00000536218 HELBQ8NG08 1087 aaPredicted RBP16.19■□□□□ 0.18
LIG1-203ENST00000536218 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
LIG1-203ENST00000536218 KCNB2Q92953 911 aa16.19■□□□□ 0.18
LIG1-203ENST00000536218 DEF6Q9H4E7 631 aa16.19■□□□□ 0.18
LIG1-203ENST00000536218 KCNQ2O43526 872 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 CT47A1Q5JQC4 288 aaPredicted RBP16.18■□□□□ 0.18
LIG1-203ENST00000536218 DISP2A7MBM2 1401 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 ANKRD65E5RJM6 399 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 SCARF1Q14162 830 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 WASHC4Q2M389 1173 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 SPATA31A1Q5TZJ5 1347 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 A0A0G2JLW4 131 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 CIAO1O76071 339 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 CYP21A2P08686 494 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 GPR108Q9NPR9 543 aa16.18■□□□□ 0.18
LIG1-203ENST00000536218 RPS6KB1P23443 525 aa16.17■□□□□ 0.18
LIG1-203ENST00000536218 PACS2Q86VP3 889 aa16.17■□□□□ 0.18
LIG1-203ENST00000536218 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
LIG1-203ENST00000536218 MNS1Q8NEH6 495 aa16.17■□□□□ 0.18
LIG1-203ENST00000536218 ST3GAL1Q11201 340 aa16.17■□□□□ 0.18
LIG1-203ENST00000536218 SMC1AQ14683 1233 aaKnown RBP16.17■□□□□ 0.18
LIG1-203ENST00000536218 AXDND1Q5T1B0 1012 aaPredicted RBP16.17■□□□□ 0.18
LIG1-203ENST00000536218 CNPY4Q8N129 248 aa16.17■□□□□ 0.18
LIG1-203ENST00000536218 FBXO18Q8NFZ0 1043 aa16.17■□□□□ 0.18
LIG1-203ENST00000536218 ZSCAN31Q96LW9 406 aaPredicted RBP16.17■□□□□ 0.18
LIG1-203ENST00000536218 EPC1Q9H2F5 836 aa16.17■□□□□ 0.18
LIG1-203ENST00000536218 ANKRD18BA2A2Z9 1011 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 CSF1RP07333 972 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 CTSWP56202 376 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 NEK1Q96PY6 1258 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 BRMS1Q9HCU9 246 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 AKAP2Q9Y2D5 859 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 HSP90B1P14625 803 aaKnown RBP16.16■□□□□ 0.18
LIG1-203ENST00000536218 FAM98CQ17RN3 349 aaKnown RBP16.16■□□□□ 0.18
LIG1-203ENST00000536218 GOLGA5Q8TBA6 731 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 SNAP23O00161 211 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 ZAP70P43403 619 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 CRKLP46109 303 aaKnown RBP16.16■□□□□ 0.18
LIG1-203ENST00000536218 TTC6Q86TZ1 520 aa16.16■□□□□ 0.18
LIG1-203ENST00000536218 TDRD7Q8NHU6 1098 aaKnown RBP16.16■□□□□ 0.18
LIG1-203ENST00000536218 SH2B1Q9NRF2 756 aaPredicted RBP16.16■□□□□ 0.18
LIG1-203ENST00000536218 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.16■□□□□ 0.184e-7■■□□□ 14.5
LIG1-203ENST00000536218 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
LIG1-203ENST00000536218 UBN2Q6ZU65 1347 aa16.15■□□□□ 0.18
LIG1-203ENST00000536218 LOC102724428A0A0B4J2F2 783 aa16.15■□□□□ 0.18
LIG1-203ENST00000536218 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
LIG1-203ENST00000536218 SIK1P57059 783 aa16.15■□□□□ 0.18
LIG1-203ENST00000536218 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
LIG1-203ENST00000536218 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
LIG1-203ENST00000536218 RNF113AO15541 343 aaKnown RBP16.15■□□□□ 0.18
LIG1-203ENST00000536218 PPFIA3O75145 1194 aa16.15■□□□□ 0.18
LIG1-203ENST00000536218 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
LIG1-203ENST00000536218 TOB2Q14106 344 aaPredicted RBP16.15■□□□□ 0.18
LIG1-203ENST00000536218 FBXW7Q969H0 707 aa16.15■□□□□ 0.18
LIG1-203ENST00000536218 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
LIG1-203ENST00000536218 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
LIG1-203ENST00000536218 NEMFO60524 1076 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 ZRANB2O95218 330 aaKnown RBP eCLIP16.14■□□□□ 0.17
LIG1-203ENST00000536218 TTLL5Q6EMB2 1281 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 LEKR1Q6ZMV7 388 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 CHST3Q7LGC8 479 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 CCDC87Q9NVE4 849 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 ITPK1Q13572 414 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 LARP1BQ659C4 914 aaKnown RBP16.14■□□□□ 0.17
LIG1-203ENST00000536218 Q6ZUG5 572 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 MTMR6Q9Y217 621 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 PAPPAQ13219 1627 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 BECN2A8MW95 431 aa16.14■□□□□ 0.17
LIG1-203ENST00000536218 PATL2C9JE40 543 aaKnown RBP16.14■□□□□ 0.17
LIG1-203ENST00000536218 M0R2C6 588 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms