RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CDCA5Q96FF9 252 aa27.29■■□□□ 1.96
VPS37C-202ENST00000535818 PRMT6Q96LA8 375 aaPredicted RBP27.29■■□□□ 1.96
VPS37C-202ENST00000535818 CRBNQ96SW2 442 aa27.29■■□□□ 1.96
VPS37C-202ENST00000535818 MKRN1Q9UHC7 482 aaKnown RBP27.29■■□□□ 1.96
VPS37C-202ENST00000535818 SALL1Q9NSC2 1324 aa27.29■■□□□ 1.96
VPS37C-202ENST00000535818 PDS5AQ29RF7 1337 aaKnown RBP27.28■■□□□ 1.96
VPS37C-202ENST00000535818 CLRN2A0PK11 232 aa27.28■■□□□ 1.96
VPS37C-202ENST00000535818 LDHBP07195 334 aaKnown RBP27.28■■□□□ 1.96
VPS37C-202ENST00000535818 HDLBPQ00341 1268 aaKnown RBP27.28■■□□□ 1.96
VPS37C-202ENST00000535818 RHPN1Q8TCX5 695 aa27.28■■□□□ 1.96
VPS37C-202ENST00000535818 KIF1BPQ96EK5 621 aa27.28■■□□□ 1.96
VPS37C-202ENST00000535818 CCDC8Q9H0W5 538 aaPredicted RBP27.28■■□□□ 1.96
VPS37C-202ENST00000535818 VEZTQ9HBM0 779 aa27.28■■□□□ 1.96
VPS37C-202ENST00000535818 ARID4AP29374 1257 aaPredicted RBP27.27■■□□□ 1.96
VPS37C-202ENST00000535818 PRDX5P30044 214 aa27.27■■□□□ 1.96
VPS37C-202ENST00000535818 IL1RAPL2Q9NP60 686 aa27.27■■□□□ 1.96
VPS37C-202ENST00000535818 RAB11FIP3O75154 756 aa27.26■■□□□ 1.95
VPS37C-202ENST00000535818 AACSQ86V21 672 aa27.26■■□□□ 1.95
VPS37C-202ENST00000535818 EAF2Q96CJ1 260 aaPredicted RBP27.26■■□□□ 1.95
VPS37C-202ENST00000535818 HMG20BQ9P0W2 317 aa27.26■■□□□ 1.95
VPS37C-202ENST00000535818 ABCF2Q9UG63 623 aa27.26■■□□□ 1.95
VPS37C-202ENST00000535818 CNTNAP1P78357 1384 aa27.25■■□□□ 1.95
VPS37C-202ENST00000535818 SPATA5Q8NB90 893 aa27.25■■□□□ 1.95
VPS37C-202ENST00000535818 BCL11AQ9H165 835 aa27.25■■□□□ 1.95
VPS37C-202ENST00000535818 TLR7Q9NYK1 1049 aaKnown RBP27.25■■□□□ 1.95
VPS37C-202ENST00000535818 DBNLQ9UJU6 430 aaKnown RBP27.25■■□□□ 1.95
VPS37C-202ENST00000535818 DEFB115Q30KQ5 88 aa27.24■■□□□ 1.95
VPS37C-202ENST00000535818 SPTY2D1Q68D10 685 aaPredicted RBP27.24■■□□□ 1.95
VPS37C-202ENST00000535818 CLASRPQ8N2M8 674 aaKnown RBP27.24■■□□□ 1.95
VPS37C-202ENST00000535818 MRIQ9BWK5 157 aa27.24■■□□□ 1.95
VPS37C-202ENST00000535818 TDRD3Q9H7E2 651 aaKnown RBP27.24■■□□□ 1.95
VPS37C-202ENST00000535818 GBA2Q9HCG7 927 aaPredicted RBP27.24■■□□□ 1.95
VPS37C-202ENST00000535818 TLL2Q9Y6L7 1015 aa27.24■■□□□ 1.95
VPS37C-202ENST00000535818 AOX1Q06278 1338 aa27.23■■□□□ 1.95
VPS37C-202ENST00000535818 MCAMP43121 646 aa27.23■■□□□ 1.95
VPS37C-202ENST00000535818 HHIPL2Q6UWX4 724 aa27.23■■□□□ 1.95
VPS37C-202ENST00000535818 PI16Q6UXB8 463 aa27.23■■□□□ 1.95
VPS37C-202ENST00000535818 PAXIP1Q6ZW49 1069 aaPredicted RBP27.23■■□□□ 1.95
VPS37C-202ENST00000535818 DZIP1Q86YF9 867 aaKnown RBP27.23■■□□□ 1.95
VPS37C-202ENST00000535818 C2orf69Q8N8R5 385 aa27.23■■□□□ 1.95
VPS37C-202ENST00000535818 ZNF70Q9UC06 446 aaPredicted RBP27.23■■□□□ 1.95
VPS37C-202ENST00000535818 RASSF10A6NK89 507 aa27.22■■□□□ 1.95
VPS37C-202ENST00000535818 NF2P35240 595 aa27.22■■□□□ 1.95
VPS37C-202ENST00000535818 SPDYE2Q495Y8 402 aa27.22■■□□□ 1.95
VPS37C-202ENST00000535818 PRAMEF18Q5VWM3 479 aa27.22■■□□□ 1.95
VPS37C-202ENST00000535818 ZDHHC15Q96MV8 337 aa27.22■■□□□ 1.95
VPS37C-202ENST00000535818 TNFAIP1Q13829 316 aa27.21■■□□□ 1.95
VPS37C-202ENST00000535818 DIXDC1Q155Q3 683 aa27.21■■□□□ 1.95
VPS37C-202ENST00000535818 ERICH6Q7L0X2 663 aa27.21■■□□□ 1.95
VPS37C-202ENST00000535818 DEFB129Q9H1M3 183 aa27.21■■□□□ 1.95
VPS37C-202ENST00000535818 TMOD2Q9NZR1 351 aa27.21■■□□□ 1.95
VPS37C-202ENST00000535818 SUPT16HQ9Y5B9 1047 aaKnown RBP27.21■■□□□ 1.95
VPS37C-202ENST00000535818 IFIT2P09913 472 aaKnown RBP27.2■■□□□ 1.94
VPS37C-202ENST00000535818 SAPCD2Q86UD0 394 aa27.2■■□□□ 1.94
VPS37C-202ENST00000535818 SNRKQ9NRH2 765 aa27.2■■□□□ 1.94
VPS37C-202ENST00000535818 PPP2R3BQ9Y5P8 575 aa27.2■■□□□ 1.94
VPS37C-202ENST00000535818 HUNKP57058 714 aa27.19■■□□□ 1.94
VPS37C-202ENST00000535818 SLF2Q8IX21 1173 aa27.19■■□□□ 1.94
VPS37C-202ENST00000535818 ZNF512BQ96KM6 892 aaPredicted RBP27.19■■□□□ 1.94
VPS37C-202ENST00000535818 DAGLAQ9Y4D2 1042 aa27.19■■□□□ 1.94
VPS37C-202ENST00000535818 PCDHB15Q9Y5E8 787 aa27.19■■□□□ 1.94
VPS37C-202ENST00000535818 CEP350Q5VT06 3117 aa27.18■■□□□ 1.94
VPS37C-202ENST00000535818 TBC1D9Q6ZT07 1266 aa27.18■■□□□ 1.94
VPS37C-202ENST00000535818 LRRCC1Q9C099 1032 aa27.18■■□□□ 1.94
VPS37C-202ENST00000535818 TCP10L2B9ZVM9 353 aa27.17■■□□□ 1.94
VPS37C-202ENST00000535818 TNNI2P48788 182 aa27.17■■□□□ 1.94
VPS37C-202ENST00000535818 VEGFBP49765 207 aa27.17■■□□□ 1.94
VPS37C-202ENST00000535818 GRM1Q13255 1194 aa27.17■■□□□ 1.94
VPS37C-202ENST00000535818 TTLL12Q14166 644 aaPredicted RBP27.17■■□□□ 1.94
VPS37C-202ENST00000535818 APOBEC3HQ6NTF7 200 aaKnown RBP27.17■■□□□ 1.94
VPS37C-202ENST00000535818 RAI14Q9P0K7 980 aa27.17■■□□□ 1.94
VPS37C-202ENST00000535818 ECE1P42892 770 aa27.16■■□□□ 1.94
VPS37C-202ENST00000535818 RASA3Q14644 834 aa27.16■■□□□ 1.94
VPS37C-202ENST00000535818 LRP2BPQ9P2M1 347 aa27.16■■□□□ 1.94
VPS37C-202ENST00000535818 PAPPA2Q9BXP8 1791 aa27.16■■□□□ 1.94
VPS37C-202ENST00000535818 FKBP1BP68106 108 aa27.15■■□□□ 1.94
VPS37C-202ENST00000535818 CYP4F22Q6NT55 531 aa27.15■■□□□ 1.94
VPS37C-202ENST00000535818 HHIPL1Q96JK4 782 aa27.15■■□□□ 1.94
VPS37C-202ENST00000535818 CAPNS2Q96L46 248 aa27.15■■□□□ 1.94
VPS37C-202ENST00000535818 DCTPP1Q9H773 170 aa27.15■■□□□ 1.94
VPS37C-202ENST00000535818 MYH2Q9UKX2 1941 aa27.15■■□□□ 1.94
VPS37C-202ENST00000535818 ZAP70P43403 619 aa27.14■■□□□ 1.94
VPS37C-202ENST00000535818 CACNB3P54284 484 aa27.14■■□□□ 1.94
VPS37C-202ENST00000535818 MECOMQ03112 1051 aa27.14■■□□□ 1.94
VPS37C-202ENST00000535818 JMYQ8N9B5 988 aa27.14■■□□□ 1.94
VPS37C-202ENST00000535818 AKAP11Q9UKA4 1901 aa27.14■■□□□ 1.93
VPS37C-202ENST00000535818 WDR33Q9C0J8 1336 aaKnown RBP27.14■■□□□ 1.93
VPS37C-202ENST00000535818 GSTO1P78417 241 aa27.13■■□□□ 1.93
VPS37C-202ENST00000535818 AAMPQ13685 434 aa27.13■■□□□ 1.93
VPS37C-202ENST00000535818 PRKG1Q13976 671 aa27.13■■□□□ 1.93
VPS37C-202ENST00000535818 SMARCA5O60264 1052 aaPredicted RBP27.12■■□□□ 1.93
VPS37C-202ENST00000535818 CYP2E1P05181 493 aaPredicted RBP27.12■■□□□ 1.93
VPS37C-202ENST00000535818 SUPT20HL1Q3ZLR7 823 aa27.12■■□□□ 1.93
VPS37C-202ENST00000535818 MROH7-TTC4A0A0A0MT08 1334 aa27.12■■□□□ 1.93
VPS37C-202ENST00000535818 GAKO14976 1311 aa27.12■■□□□ 1.93
VPS37C-202ENST00000535818 LDHCP07864 332 aa27.11■■□□□ 1.93
VPS37C-202ENST00000535818 CDC42EP5Q6NZY7 148 aa27.11■■□□□ 1.93
VPS37C-202ENST00000535818 ARMC9Q7Z3E5 817 aa27.11■■□□□ 1.93
VPS37C-202ENST00000535818 NSUN4Q96CB9 384 aaKnown RBP27.11■■□□□ 1.93
VPS37C-202ENST00000535818 USP40Q9NVE5 1235 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms