RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MAK16Q9BXY0 300 aaKnown RBP20.47■□□□□ 0.87
SFSWAP-203ENST00000535236 STK32BQ9NY57 414 aa20.47■□□□□ 0.87
SFSWAP-203ENST00000535236 AK2P54819 239 aa20.47■□□□□ 0.87
SFSWAP-203ENST00000535236 SV2BQ7L1I2 683 aa20.47■□□□□ 0.87
SFSWAP-203ENST00000535236 FMNL3Q8IVF7 1028 aa20.47■□□□□ 0.87
SFSWAP-203ENST00000535236 RAD50Q92878 1312 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 ZBTB16Q05516 673 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 RAPGEF1Q13905 1077 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 CCDC129Q6ZRS4 1044 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 FNBP1Q96RU3 617 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 ZKSCAN3Q9BRR0 538 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 POLKQ9UBT6 870 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 RNMTO43148 476 aaKnown RBP20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 BIRC3Q13489 604 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 WDR44Q5JSH3 913 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 SELENOSQ9BQE4 189 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 BICC1Q9H694 974 aaKnown RBP20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 GPCPD1Q9NPB8 672 aa20.46■□□□□ 0.87
SFSWAP-203ENST00000535236 GCP02774 474 aa20.45■□□□□ 0.87
SFSWAP-203ENST00000535236 HARSP12081 509 aaKnown RBP20.45■□□□□ 0.87
SFSWAP-203ENST00000535236 PSMC4P43686 418 aa20.45■□□□□ 0.87
SFSWAP-203ENST00000535236 LETM2Q2VYF4 491 aa20.45■□□□□ 0.87
SFSWAP-203ENST00000535236 GUCA1BQ9UMX6 200 aa20.45■□□□□ 0.87
SFSWAP-203ENST00000535236 MAP7D1Q3KQU3 841 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 CEP85Q6P2H3 762 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 CAPZA3Q96KX2 299 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 ARHGEF10LQ9HCE6 1279 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 PPP1R7Q15435 360 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 BRDTQ58F21 947 aaPredicted RBP20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 ATRIPQ8WXE1 791 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 HELLSQ9NRZ9 838 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 TUBB4AP04350 444 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 ODF2LQ9ULJ1 636 aa20.45■□□□□ 0.86
SFSWAP-203ENST00000535236 SLU7O95391 586 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 PKNOX2Q96KN3 472 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 KRT5P13647 590 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 TYRO3Q06418 890 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 MCM6Q14566 821 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 EPB41P11171 864 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 SLC8A3P57103 927 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 SRRTQ9BXP5 876 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 BTG4Q9NY30 223 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 CCNL1Q9UK58 526 aaPredicted RBP20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 GAS8O95995 478 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 CCDC114Q96M63 670 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 MTRF1LQ9UGC7 380 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 MTUS1Q9ULD2 1270 aa20.44■□□□□ 0.86
SFSWAP-203ENST00000535236 HIBADHP31937 336 aaKnown RBP20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 PARP10Q53GL7 1025 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 CFAP58Q5T655 872 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 GOLGA1Q92805 767 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 LUC7L2Q9Y383 392 aaKnown RBP20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 CCT6AP40227 531 aaKnown RBP20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 SMTNP53814 917 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 VWA3AA6NCI4 1184 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 ZNF174Q15697 407 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 STX10O60499 249 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 NOLC1Q14978 699 aaKnown RBP eCLIP20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 FCHSD1Q86WN1 690 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 KIFAP3Q92845 792 aa20.43■□□□□ 0.86
SFSWAP-203ENST00000535236 CHMP2AO43633 222 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 PLCD1P51178 756 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 SEL1L2Q5TEA6 688 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 ANKS4BQ8N8V4 417 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 GPHNQ9NQX3 736 aaPredicted RBP20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 ANAPC4Q9UJX5 808 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 DYNC1I1O14576 645 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 EYA1Q99502 592 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 DCTPP1Q9H773 170 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 CDCA7Q9BWT1 371 aaPredicted RBP20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 TRAF5O00463 557 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 PPP1R9BQ96SB3 815 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 ZNF408Q9H9D4 720 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 GGA1Q9UJY5 639 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 MAST3O60307 1309 aa20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 SOS1Q07889 1333 aaPredicted RBP20.42■□□□□ 0.86
SFSWAP-203ENST00000535236 CCDC169A6NNP5 214 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 CCDC25Q86WR0 208 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 JAKMIP2Q96AA8 810 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 SMIM23A6NLE4 172 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 CALCOCO2Q13137 446 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 NPATQ14207 1427 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 SH3BP5O60239 455 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 ITGA6P23229 1130 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 KARSQ15046 597 aaKnown RBP20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 SNX21Q969T3 373 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 LMTK3Q96Q04 1460 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 HOXC9P31274 260 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 PPP1R2P41236 205 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 LZTFL1Q9NQ48 299 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 A2MP01023 1474 aa20.41■□□□□ 0.86
SFSWAP-203ENST00000535236 TNNC1P63316 161 aa20.4■□□□□ 0.86
SFSWAP-203ENST00000535236 KRT222Q8N1A0 295 aa20.4■□□□□ 0.86
SFSWAP-203ENST00000535236 RNF34Q969K3 372 aa20.4■□□□□ 0.86
SFSWAP-203ENST00000535236 FAM89AQ96GI7 184 aa20.4■□□□□ 0.86
SFSWAP-203ENST00000535236 IFT74Q96LB3 600 aa20.4■□□□□ 0.86
SFSWAP-203ENST00000535236 IVNS1ABPQ9Y6Y0 642 aa20.4■□□□□ 0.86
SFSWAP-203ENST00000535236 PUM3Q15397 648 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms