RNA–Protein interactions for RNA: ENST00000535140.1

OTUB1-205, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-205ENST00000535140 ELP3Q9H9T3 547 aa23.25■■□□□ 1.31
OTUB1-205ENST00000535140 UNCXA6NJT0 531 aa23.24■■□□□ 1.31
OTUB1-205ENST00000535140 TCP10L2B9ZVM9 353 aa23.24■■□□□ 1.31
OTUB1-205ENST00000535140 CRKP46108 304 aa23.24■■□□□ 1.31
OTUB1-205ENST00000535140 RABL6Q3YEC7 729 aaPredicted RBP23.24■■□□□ 1.31
OTUB1-205ENST00000535140 KLHDC4Q8TBB5 520 aa23.23■■□□□ 1.31
OTUB1-205ENST00000535140 TRIM17Q9Y577 477 aa23.23■■□□□ 1.31
OTUB1-205ENST00000535140 FRAT2O75474 233 aaPredicted RBP23.22■■□□□ 1.31
OTUB1-205ENST00000535140 FBXO33Q7Z6M2 555 aa23.22■■□□□ 1.31
OTUB1-205ENST00000535140 TEPSINQ96N21 525 aa23.22■■□□□ 1.31
OTUB1-205ENST00000535140 TMEM39BQ9GZU3 492 aa23.22■■□□□ 1.31
OTUB1-205ENST00000535140 CRHR2Q13324 411 aa23.21■■□□□ 1.31
OTUB1-205ENST00000535140 CAVIN4Q5BKX8 364 aa23.21■■□□□ 1.31
OTUB1-205ENST00000535140 OTOP1Q7RTM1 612 aa23.21■■□□□ 1.31
OTUB1-205ENST00000535140 OPTNQ96CV9 577 aa23.21■■□□□ 1.31
OTUB1-205ENST00000535140 PTPRCP08575 1304 aa23.2■■□□□ 1.3
OTUB1-205ENST00000535140 TNNI2P48788 182 aa23.2■■□□□ 1.3
OTUB1-205ENST00000535140 CACNB3P54284 484 aa23.2■■□□□ 1.3
OTUB1-205ENST00000535140 OTUD7BQ6GQQ9 843 aa23.2■■□□□ 1.3
OTUB1-205ENST00000535140 VGLL2Q8N8G2 317 aa23.2■■□□□ 1.3
OTUB1-205ENST00000535140 PDE8BO95263 885 aa23.19■■□□□ 1.3
OTUB1-205ENST00000535140 CD99L2Q8TCZ2 262 aa23.19■■□□□ 1.3
OTUB1-205ENST00000535140 CNKSR2Q8WXI2 1034 aa23.19■■□□□ 1.3
OTUB1-205ENST00000535140 SSH1Q8WYL5 1049 aa23.19■■□□□ 1.3
OTUB1-205ENST00000535140 PTPN18Q99952 460 aa23.19■■□□□ 1.3
OTUB1-205ENST00000535140 BCAMP50895 628 aa23.18■■□□□ 1.3
OTUB1-205ENST00000535140 VGLL4Q14135 290 aa23.18■■□□□ 1.3
OTUB1-205ENST00000535140 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.18■■□□□ 1.3
OTUB1-205ENST00000535140 TBC1D22AQ8WUA7 517 aa23.18■■□□□ 1.3
OTUB1-205ENST00000535140 PRPF38BQ5VTL8 546 aaKnown RBP23.17■■□□□ 1.3
OTUB1-205ENST00000535140 TEKT1Q969V4 418 aa23.17■■□□□ 1.3
OTUB1-205ENST00000535140 ERO1AQ96HE7 468 aa23.17■■□□□ 1.3
OTUB1-205ENST00000535140 USP44Q9H0E7 712 aa23.17■■□□□ 1.3
OTUB1-205ENST00000535140 TESPA1A2RU30 521 aaPredicted RBP23.16■■□□□ 1.3
OTUB1-205ENST00000535140 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.16■■□□□ 1.39e-7■■■■□ 20
OTUB1-205ENST00000535140 E9PSI1 815 aa23.15■■□□□ 1.3
OTUB1-205ENST00000535140 MAP3K9P80192 1104 aa23.15■■□□□ 1.3
OTUB1-205ENST00000535140 HDLBPQ00341 1268 aaKnown RBP23.15■■□□□ 1.3
OTUB1-205ENST00000535140 PUM3Q15397 648 aaKnown RBP23.15■■□□□ 1.3
OTUB1-205ENST00000535140 OTUD5Q96G74 571 aa23.15■■□□□ 1.3
OTUB1-205ENST00000535140 MS4A4AQ96JQ5 239 aa23.15■■□□□ 1.3
OTUB1-205ENST00000535140 CSADQ9Y600 493 aa23.15■■□□□ 1.3
OTUB1-205ENST00000535140 IFIT1P09914 478 aaKnown RBP23.14■■□□□ 1.29
OTUB1-205ENST00000535140 BRI3BPQ8WY22 251 aa23.14■■□□□ 1.29
OTUB1-205ENST00000535140 TMOD2Q9NZR1 351 aa23.14■■□□□ 1.29
OTUB1-205ENST00000535140 CCL15-CCL14A0A0B4J2E2 113 aa23.13■■□□□ 1.29
OTUB1-205ENST00000535140 SP3Q02447 781 aa23.13■■□□□ 1.29
OTUB1-205ENST00000535140 CCL15Q16663 113 aa23.13■■□□□ 1.29
OTUB1-205ENST00000535140 ZDHHC15Q96MV8 337 aa23.13■■□□□ 1.29
OTUB1-205ENST00000535140 PTPN22Q9Y2R2 807 aa23.13■■□□□ 1.29
OTUB1-205ENST00000535140 MYH13Q9UKX3 1938 aa23.13■■□□□ 1.29
OTUB1-205ENST00000535140 FGFR2P21802 821 aa23.12■■□□□ 1.29
OTUB1-205ENST00000535140 CAP1Q01518 475 aa23.12■■□□□ 1.29
OTUB1-205ENST00000535140 EFCC1Q9HA90 598 aa23.12■■□□□ 1.29
OTUB1-205ENST00000535140 MAST3O60307 1309 aa23.11■■□□□ 1.29
OTUB1-205ENST00000535140 EYA2O00167 538 aa23.11■■□□□ 1.29
OTUB1-205ENST00000535140 RFX5P48382 616 aaPredicted RBP23.11■■□□□ 1.29
OTUB1-205ENST00000535140 GTF2A2P52657 109 aa23.11■■□□□ 1.29
OTUB1-205ENST00000535140 SLFN5Q08AF3 891 aa23.11■■□□□ 1.29
OTUB1-205ENST00000535140 TAF1CQ15572 869 aaPredicted RBP23.11■■□□□ 1.29
OTUB1-205ENST00000535140 APOBEC3HQ6NTF7 200 aaKnown RBP23.11■■□□□ 1.29
OTUB1-205ENST00000535140 WRNIP1Q96S55 665 aa23.11■■□□□ 1.29
OTUB1-205ENST00000535140 SMC4Q9NTJ3 1288 aa23.11■■□□□ 1.29
OTUB1-205ENST00000535140 KIF16BQ96L93 1317 aa23.1■■□□□ 1.29
OTUB1-205ENST00000535140 POTEFA5A3E0 1075 aa23.1■■□□□ 1.29
OTUB1-205ENST00000535140 SLC5A1P13866 664 aa23.1■■□□□ 1.29
OTUB1-205ENST00000535140 FAM43AQ8N2R8 423 aa23.1■■□□□ 1.29
OTUB1-205ENST00000535140 SNCAIPQ9Y6H5 919 aa23.1■■□□□ 1.29
OTUB1-205ENST00000535140 SPDYE5A6NIY4 337 aa23.09■■□□□ 1.29
OTUB1-205ENST00000535140 ZKSCAN4Q969J2 545 aaPredicted RBP23.09■■□□□ 1.29
OTUB1-205ENST00000535140 CDCA7LQ96GN5 454 aa23.09■■□□□ 1.29
OTUB1-205ENST00000535140 ZFYVE28Q9HCC9 887 aa23.09■■□□□ 1.29
OTUB1-205ENST00000535140 ALDH1L2Q3SY69 923 aa23.08■■□□□ 1.29
OTUB1-205ENST00000535140 INTS3Q68E01 1043 aaKnown RBP23.08■■□□□ 1.29
OTUB1-205ENST00000535140 FAM83AQ86UY5 434 aa23.08■■□□□ 1.29
OTUB1-205ENST00000535140 LPIN2Q92539 896 aa23.08■■□□□ 1.29
OTUB1-205ENST00000535140 MRIQ9BWK5 157 aa23.08■■□□□ 1.29
OTUB1-205ENST00000535140 SIL1Q9H173 461 aa23.08■■□□□ 1.29
OTUB1-205ENST00000535140 SUGT1Q9Y2Z0 365 aa23.08■■□□□ 1.29
OTUB1-205ENST00000535140 FKBP1CQ5VVH2 108 aa23.07■■□□□ 1.28
OTUB1-205ENST00000535140 HHIPL2Q6UWX4 724 aa23.07■■□□□ 1.28
OTUB1-205ENST00000535140 ATG9AQ7Z3C6 839 aa23.07■■□□□ 1.28
OTUB1-205ENST00000535140 HTTP42858 3142 aa23.06■■□□□ 1.28
OTUB1-205ENST00000535140 RPAP1Q9BWH6 1393 aaPredicted RBP23.06■■□□□ 1.28
OTUB1-205ENST00000535140 UBTFL1P0CB47 393 aaPredicted RBP23.06■■□□□ 1.28
OTUB1-205ENST00000535140 ERO1BQ86YB8 467 aa23.06■■□□□ 1.28
OTUB1-205ENST00000535140 WDR66Q8TBY9 1149 aa23.06■■□□□ 1.28
OTUB1-205ENST00000535140 HOOK2Q96ED9 719 aa23.06■■□□□ 1.28
OTUB1-205ENST00000535140 RBBP6Q7Z6E9 1792 aaKnown RBP23.06■■□□□ 1.28
OTUB1-205ENST00000535140 IRF6O14896 467 aa23.05■■□□□ 1.28
OTUB1-205ENST00000535140 DIXDC1Q155Q3 683 aa23.05■■□□□ 1.28
OTUB1-205ENST00000535140 DCAF15Q66K64 600 aa23.05■■□□□ 1.28
OTUB1-205ENST00000535140 MIGA2Q7L4E1 593 aa23.05■■□□□ 1.28
OTUB1-205ENST00000535140 ARMC5Q96C12 935 aa23.05■■□□□ 1.28
OTUB1-205ENST00000535140 DAGLAQ9Y4D2 1042 aa23.05■■□□□ 1.28
OTUB1-205ENST00000535140 ZSWIM8A7E2V4 1837 aa23.04■■□□□ 1.28
OTUB1-205ENST00000535140 CETPP11597 493 aa23.04■■□□□ 1.28
OTUB1-205ENST00000535140 ATP2B3Q16720 1220 aa23.04■■□□□ 1.28
OTUB1-205ENST00000535140 BTBD19C9JJ37 291 aa23.03■■□□□ 1.28
OTUB1-205ENST00000535140 PRDX5P30044 214 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms