RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 DNAJC5GQ8N7S2 189 aa11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 ANKRD2Q9GZV1 360 aa11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 MKRN1Q9UHC7 482 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-219ENST00000534753 C3orf80F5H4A9 247 aa11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 SNAP23O00161 211 aa11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 LDHAL6AQ6ZMR3 332 aa11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 TRPM4Q8TD43 1214 aa11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 FRAT1Q92837 279 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 KLRG1Q96E93 195 aa11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 ZNF804BA4D1E1 1349 aa11.23□□□□□ -0.61
CCDC90B-219ENST00000534753 TRAF5O00463 557 aa11.22□□□□□ -0.61
CCDC90B-219ENST00000534753 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-219ENST00000534753 KLRK1P26718 216 aa11.22□□□□□ -0.61
CCDC90B-219ENST00000534753 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-219ENST00000534753 TXNRD3Q86VQ6 643 aa11.22□□□□□ -0.61
CCDC90B-219ENST00000534753 MXD3Q9BW11 206 aa11.22□□□□□ -0.61
CCDC90B-219ENST00000534753 ZNF408Q9H9D4 720 aa11.22□□□□□ -0.61
CCDC90B-219ENST00000534753 LEMD3Q9Y2U8 911 aa11.22□□□□□ -0.61
CCDC90B-219ENST00000534753 PASKQ96RG2 1323 aa11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 USP17L3A6NCW0 530 aa11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 USP17L4A6NCW7 530 aa11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 OATP04181 439 aa11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 CT47B1P0C2W7 299 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 RARSP54136 660 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 HIRAP54198 1017 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 MMRN1Q13201 1228 aa11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 GRM1Q13255 1194 aa11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 USP17L1Q7RTZ2 530 aa11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 GLIS2Q9BZE0 524 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 ABT1Q9ULW3 272 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-219ENST00000534753 MED23Q9ULK4 1368 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 BCAR3O75815 825 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 EGFRP00533 1210 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 VIL1P09327 827 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 RPS12P25398 132 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 RSBN1LQ6PCB5 846 aaPredicted RBP11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 PODNQ7Z5L7 613 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 USP48Q86UV5 1035 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 KLHDC4Q8TBB5 520 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 DPF2Q92785 391 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 KAZALD1Q96I82 304 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 PUS3Q9BZE2 481 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 API5Q9BZZ5 524 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 RBM27Q9P2N5 1060 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-219ENST00000534753 UBTFL1P0CB47 393 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 GTF2IP78347 998 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 KIF4BQ2VIQ3 1234 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 CLUAP1Q96AJ1 413 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 BEGAINQ9BUH8 593 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 COA1Q9GZY4 146 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 FAM217BQ9NTX9 383 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 TSKSQ9UJT2 592 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 JAG2Q9Y219 1238 aa11.19□□□□□ -0.62
CCDC90B-219ENST00000534753 ADAMTSL1Q8N6G6 1762 aa11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 UTYO14607 1347 aa11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 SCN9AQ15858 1988 aa11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 CELF2O95319 508 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 USP17L8P0C7I0 530 aa11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 LRRC24Q50LG9 513 aa11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 TTLL5Q6EMB2 1281 aa11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 ZNF804AQ7Z570 1209 aa11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 TNNQ9UQP3 1299 aa11.18□□□□□ -0.62
CCDC90B-219ENST00000534753 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 F8W031 263 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 IPO8O15397 1037 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 SCARF1Q14162 830 aa11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 METTL24Q5JXM2 366 aa11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 KIAA0825Q8IV33 1275 aa11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 AGBL3Q8NEM8 1001 aa11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 SIL1Q9H173 461 aa11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 CD209Q9NNX6 404 aa11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 SCAF8Q9UPN6 1271 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-219ENST00000534753 ADM5C9JUS6 153 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 GYG1P46976 350 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 VEGFBP49765 207 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 DACT2Q5SW24 774 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 KRT26Q7Z3Y9 468 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 OGFOD1Q8N543 542 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 MEIS3Q99687 375 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 MYOZ2Q9NPC6 264 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 GGA3Q9NZ52 723 aa11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 IQSEC3Q9UPP2 1182 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 LRRFIP2Q9Y608 721 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-219ENST00000534753 MROH5Q6ZUA9 1318 aa11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 PPP1R3GB7ZBB8 358 aa11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 FRAT2O75474 233 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 PTPREP23469 700 aa11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms