RNA–Protein interactions for RNA: ENST00000534614.1

CELF1-217, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-217ENST00000534614 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
CELF1-217ENST00000534614 HABP4Q5JVS0 413 aaKnown RBP12.11□□□□□ -0.47
CELF1-217ENST00000534614 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
CELF1-217ENST00000534614 FBXO33Q7Z6M2 555 aa12.11□□□□□ -0.47
CELF1-217ENST00000534614 DZIP1LQ8IYY4 767 aaKnown RBP12.11□□□□□ -0.47
CELF1-217ENST00000534614 VGLL2Q8N8G2 317 aa12.11□□□□□ -0.47
CELF1-217ENST00000534614 OPTNQ96CV9 577 aa12.11□□□□□ -0.47
CELF1-217ENST00000534614 EFCC1Q9HA90 598 aa12.11□□□□□ -0.47
CELF1-217ENST00000534614 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
CELF1-217ENST00000534614 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
CELF1-217ENST00000534614 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
CELF1-217ENST00000534614 SPDYE5A6NIY4 337 aa12.1□□□□□ -0.47
CELF1-217ENST00000534614 GYG1P46976 350 aa12.1□□□□□ -0.47
CELF1-217ENST00000534614 GRIK5Q16478 980 aa12.1□□□□□ -0.47
CELF1-217ENST00000534614 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
CELF1-217ENST00000534614 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
CELF1-217ENST00000534614 PUS3Q9BZE2 481 aaKnown RBP12.1□□□□□ -0.47
CELF1-217ENST00000534614 TDRD3Q9H7E2 651 aaKnown RBP12.1□□□□□ -0.47
CELF1-217ENST00000534614 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
CELF1-217ENST00000534614 TTF2Q9UNY4 1162 aaKnown RBP12.1□□□□□ -0.47
CELF1-217ENST00000534614 KIF16BQ96L93 1317 aa12.1□□□□□ -0.47
CELF1-217ENST00000534614 HIBADHP31937 336 aaKnown RBP12.09□□□□□ -0.47
CELF1-217ENST00000534614 CRKP46108 304 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 FKBP1CQ5VVH2 108 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 MRIQ9BWK5 157 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 CNNM1Q9NRU3 951 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
CELF1-217ENST00000534614 RANBP2P49792 3224 aaKnown RBP12.08□□□□□ -0.48
CELF1-217ENST00000534614 GTF2A2P52657 109 aa12.08□□□□□ -0.48
CELF1-217ENST00000534614 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
CELF1-217ENST00000534614 FAM83AQ86UY5 434 aa12.08□□□□□ -0.48
CELF1-217ENST00000534614 ANKRD44Q8N8A2 993 aa12.08□□□□□ -0.48
CELF1-217ENST00000534614 ZDHHC15Q96MV8 337 aa12.08□□□□□ -0.48
CELF1-217ENST00000534614 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
CELF1-217ENST00000534614 ADGRA2Q96PE1 1338 aa12.08□□□□□ -0.48
CELF1-217ENST00000534614 PTPRFP10586 1907 aa12.07□□□□□ -0.48
CELF1-217ENST00000534614 CCL15-CCL14A0A0B4J2E2 113 aa12.07□□□□□ -0.48
CELF1-217ENST00000534614 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
CELF1-217ENST00000534614 EN2P19622 333 aaPredicted RBP12.07□□□□□ -0.48
CELF1-217ENST00000534614 FXR1P51114 621 aaKnown RBP eCLIP12.07□□□□□ -0.48
CELF1-217ENST00000534614 TAF1CQ15572 869 aaPredicted RBP12.07□□□□□ -0.48
CELF1-217ENST00000534614 CCL15Q16663 113 aa12.07□□□□□ -0.48
CELF1-217ENST00000534614 TBC1D22AQ8WUA7 517 aa12.07□□□□□ -0.48
CELF1-217ENST00000534614 SRCIN1Q9C0H9 1055 aa12.07□□□□□ -0.48
CELF1-217ENST00000534614 SUGT1Q9Y2Z0 365 aa12.07□□□□□ -0.48
CELF1-217ENST00000534614 PTCH2Q9Y6C5 1203 aa12.07□□□□□ -0.48
CELF1-217ENST00000534614 TCP10L2B9ZVM9 353 aa12.06□□□□□ -0.48
CELF1-217ENST00000534614 ZBTB22O15209 634 aa12.06□□□□□ -0.48
CELF1-217ENST00000534614 TLR2O60603 784 aa12.06□□□□□ -0.48
CELF1-217ENST00000534614 FGFR2P21802 821 aa12.06□□□□□ -0.48
CELF1-217ENST00000534614 TNNI2P48788 182 aa12.06□□□□□ -0.48
CELF1-217ENST00000534614 RBM5P52756 815 aaKnown RBP eCLIP12.06□□□□□ -0.48
CELF1-217ENST00000534614 TAF7LQ5H9L4 462 aa12.06□□□□□ -0.48
CELF1-217ENST00000534614 APOBEC3HQ6NTF7 200 aaKnown RBP12.06□□□□□ -0.48
CELF1-217ENST00000534614 ERO1BQ86YB8 467 aa12.06□□□□□ -0.48
CELF1-217ENST00000534614 ZFYVE28Q9HCC9 887 aa12.06□□□□□ -0.48
CELF1-217ENST00000534614 C9orf78Q9NZ63 289 aaPredicted RBP12.06□□□□□ -0.48
CELF1-217ENST00000534614 DOCK2Q92608 1830 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 BTBD19C9JJ37 291 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 PLIN1O60240 522 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 PDE8BO95263 885 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 PPIL2Q13356 520 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
CELF1-217ENST00000534614 CSADQ9Y600 493 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 MGAMO43451 1857 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 RFX7Q2KHR2 1363 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 ATRNL1Q5VV63 1379 aa12.05□□□□□ -0.48
CELF1-217ENST00000534614 IRF6O14896 467 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 GNRH1P01148 92 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 CETPP11597 493 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 LACTBP83111 547 aaPredicted RBP12.04□□□□□ -0.48
CELF1-217ENST00000534614 MOGSQ13724 837 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 ARHGEF6Q15052 776 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 SLC9C1Q4G0N8 1177 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 LRRC24Q50LG9 513 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 HHIPL2Q6UWX4 724 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 C17orf99Q6UX52 265 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 TEKT1Q969V4 418 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 SHISA4Q96DD7 197 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 ZNF112Q9UJU3 913 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 KCNH4Q9UQ05 1017 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 MAST3O60307 1309 aa12.04□□□□□ -0.48
CELF1-217ENST00000534614 SZT2Q5T011 3432 aa12.03□□□□□ -0.48
CELF1-217ENST00000534614 PHIPQ8WWQ0 1821 aa12.03□□□□□ -0.48
CELF1-217ENST00000534614 CTGFP29279 349 aa12.03□□□□□ -0.48
CELF1-217ENST00000534614 RFX5P48382 616 aaPredicted RBP12.03□□□□□ -0.48
CELF1-217ENST00000534614 CACNB3P54284 484 aa12.03□□□□□ -0.48
CELF1-217ENST00000534614 PRMT2P55345 433 aa12.03□□□□□ -0.48
CELF1-217ENST00000534614 SNAPC2Q13487 334 aa12.03□□□□□ -0.48
CELF1-217ENST00000534614 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
CELF1-217ENST00000534614 WRNIP1Q96S55 665 aa12.03□□□□□ -0.48
CELF1-217ENST00000534614 PPATQ06203 517 aa12.02□□□□□ -0.49
CELF1-217ENST00000534614 NOL9Q5SY16 702 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms