RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 LRRC24Q50LG9 513 aa22.22■■□□□ 1.15
RECQL4-207ENST00000534538 VGLL2Q8N8G2 317 aa22.22■■□□□ 1.15
RECQL4-207ENST00000534538 TBC1D22AQ8WUA7 517 aa22.22■■□□□ 1.15
RECQL4-207ENST00000534538 MRIQ9BWK5 157 aa22.22■■□□□ 1.15
RECQL4-207ENST00000534538 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.22■■□□□ 1.15
RECQL4-207ENST00000534538 GJA5P36382 358 aa22.21■■□□□ 1.15
RECQL4-207ENST00000534538 METTL24Q5JXM2 366 aa22.21■■□□□ 1.15
RECQL4-207ENST00000534538 LAMB1P07942 1786 aa22.2■■□□□ 1.14
RECQL4-207ENST00000534538 TNNI2P48788 182 aa22.2■■□□□ 1.14
RECQL4-207ENST00000534538 USP44Q9H0E7 712 aa22.2■■□□□ 1.14
RECQL4-207ENST00000534538 E9PSI1 815 aa22.19■■□□□ 1.14
RECQL4-207ENST00000534538 PTPN18Q99952 460 aa22.19■■□□□ 1.14
RECQL4-207ENST00000534538 KIF16BQ96L93 1317 aa22.18■■□□□ 1.14
RECQL4-207ENST00000534538 TCP10L2B9ZVM9 353 aa22.18■■□□□ 1.14
RECQL4-207ENST00000534538 FRAT2O75474 233 aaPredicted RBP22.18■■□□□ 1.14
RECQL4-207ENST00000534538 GRIK5Q16478 980 aa22.18■■□□□ 1.14
RECQL4-207ENST00000534538 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.18■■□□□ 1.14
RECQL4-207ENST00000534538 SSH1Q8WYL5 1049 aa22.18■■□□□ 1.14
RECQL4-207ENST00000534538 MS4A4AQ96JQ5 239 aa22.18■■□□□ 1.14
RECQL4-207ENST00000534538 IQSEC3Q9UPP2 1182 aaPredicted RBP22.18■■□□□ 1.14
RECQL4-207ENST00000534538 SUGT1Q9Y2Z0 365 aa22.18■■□□□ 1.14
RECQL4-207ENST00000534538 TRIM17Q9Y577 477 aa22.18■■□□□ 1.14
RECQL4-207ENST00000534538 BCAMP50895 628 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 MAP3K9P80192 1104 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 CHAF1AQ13111 956 aaPredicted RBP22.17■■□□□ 1.14
RECQL4-207ENST00000534538 CRHR2Q13324 411 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 OTOP1Q7RTM1 612 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 TEKT1Q969V4 418 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 OPTNQ96CV9 577 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 ERO1AQ96HE7 468 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 TMEM39BQ9GZU3 492 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 ELP3Q9H9T3 547 aa22.17■■□□□ 1.14
RECQL4-207ENST00000534538 FGFR2P21802 821 aa22.16■■□□□ 1.14
RECQL4-207ENST00000534538 CDAN1Q8IWY9 1227 aa22.16■■□□□ 1.14
RECQL4-207ENST00000534538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.16■■□□□ 1.143e-6■■■■□ 23.7
RECQL4-207ENST00000534538 ZDHHC15Q96MV8 337 aa22.16■■□□□ 1.14
RECQL4-207ENST00000534538 ARAP2Q8WZ64 1704 aa22.16■■□□□ 1.14
RECQL4-207ENST00000534538 IFIT1P09914 478 aaKnown RBP22.15■■□□□ 1.14
RECQL4-207ENST00000534538 SLFN5Q08AF3 891 aa22.15■■□□□ 1.14
RECQL4-207ENST00000534538 PUM3Q15397 648 aaKnown RBP22.15■■□□□ 1.14
RECQL4-207ENST00000534538 ALDH1L2Q3SY69 923 aa22.15■■□□□ 1.14
RECQL4-207ENST00000534538 FKBP1CQ5VVH2 108 aa22.15■■□□□ 1.14
RECQL4-207ENST00000534538 INTS3Q68E01 1043 aaKnown RBP22.15■■□□□ 1.14
RECQL4-207ENST00000534538 KLHDC4Q8TBB5 520 aa22.15■■□□□ 1.14
RECQL4-207ENST00000534538 GTF2A2P52657 109 aa22.14■■□□□ 1.13
RECQL4-207ENST00000534538 VGLL4Q14135 290 aa22.14■■□□□ 1.13
RECQL4-207ENST00000534538 PRPF38BQ5VTL8 546 aaKnown RBP22.14■■□□□ 1.13
RECQL4-207ENST00000534538 HHIPL2Q6UWX4 724 aa22.14■■□□□ 1.13
RECQL4-207ENST00000534538 HTTP42858 3142 aa22.13■■□□□ 1.13
RECQL4-207ENST00000534538 MAST3O60307 1309 aa22.13■■□□□ 1.13
RECQL4-207ENST00000534538 EYA2O00167 538 aa22.13■■□□□ 1.13
RECQL4-207ENST00000534538 RFX5P48382 616 aaPredicted RBP22.13■■□□□ 1.13
RECQL4-207ENST00000534538 SP3Q02447 781 aa22.13■■□□□ 1.13
RECQL4-207ENST00000534538 FAM83AQ86UY5 434 aa22.13■■□□□ 1.13
RECQL4-207ENST00000534538 PTPN22Q9Y2R2 807 aa22.13■■□□□ 1.13
RECQL4-207ENST00000534538 CSADQ9Y600 493 aa22.13■■□□□ 1.13
RECQL4-207ENST00000534538 APOBEC3HQ6NTF7 200 aaKnown RBP22.12■■□□□ 1.13
RECQL4-207ENST00000534538 BRI3BPQ8WY22 251 aa22.12■■□□□ 1.13
RECQL4-207ENST00000534538 LPIN2Q92539 896 aa22.12■■□□□ 1.13
RECQL4-207ENST00000534538 HOOK2Q96ED9 719 aa22.12■■□□□ 1.13
RECQL4-207ENST00000534538 TMOD2Q9NZR1 351 aa22.12■■□□□ 1.13
RECQL4-207ENST00000534538 OTOFQ9HC10 1997 aa22.11■■□□□ 1.13
RECQL4-207ENST00000534538 CD99L2Q8TCZ2 262 aa22.11■■□□□ 1.13
RECQL4-207ENST00000534538 CNKSR2Q8WXI2 1034 aa22.11■■□□□ 1.13
RECQL4-207ENST00000534538 EFCC1Q9HA90 598 aa22.11■■□□□ 1.13
RECQL4-207ENST00000534538 FBXO3Q9UK99 471 aa22.11■■□□□ 1.13
RECQL4-207ENST00000534538 CCL15-CCL14A0A0B4J2E2 113 aa22.1■■□□□ 1.13
RECQL4-207ENST00000534538 SLC5A1P13866 664 aa22.1■■□□□ 1.13
RECQL4-207ENST00000534538 CACNB3P54284 484 aa22.1■■□□□ 1.13
RECQL4-207ENST00000534538 CCL15Q16663 113 aa22.1■■□□□ 1.13
RECQL4-207ENST00000534538 WDR66Q8TBY9 1149 aa22.1■■□□□ 1.13
RECQL4-207ENST00000534538 SPDYE5A6NIY4 337 aa22.09■■□□□ 1.13
RECQL4-207ENST00000534538 ARHGEF6Q15052 776 aa22.09■■□□□ 1.13
RECQL4-207ENST00000534538 ATG9AQ7Z3C6 839 aa22.09■■□□□ 1.13
RECQL4-207ENST00000534538 ZFYVE28Q9HCC9 887 aa22.09■■□□□ 1.13
RECQL4-207ENST00000534538 ERO1BQ86YB8 467 aa22.08■■□□□ 1.13
RECQL4-207ENST00000534538 TRMT2AQ8IZ69 625 aaKnown RBP22.08■■□□□ 1.13
RECQL4-207ENST00000534538 ARMC5Q96C12 935 aa22.08■■□□□ 1.13
RECQL4-207ENST00000534538 OTUD5Q96G74 571 aa22.08■■□□□ 1.13
RECQL4-207ENST00000534538 SNCAIPQ9Y6H5 919 aa22.08■■□□□ 1.13
RECQL4-207ENST00000534538 CIAO1O76071 339 aa22.07■■□□□ 1.12
RECQL4-207ENST00000534538 CT47B1P0C2W7 299 aaPredicted RBP22.07■■□□□ 1.12
RECQL4-207ENST00000534538 CETPP11597 493 aa22.07■■□□□ 1.12
RECQL4-207ENST00000534538 TAF1CQ15572 869 aaPredicted RBP22.07■■□□□ 1.12
RECQL4-207ENST00000534538 FAM43AQ8N2R8 423 aa22.07■■□□□ 1.12
RECQL4-207ENST00000534538 ZCCHC17Q9NP64 241 aaKnown RBP22.07■■□□□ 1.12
RECQL4-207ENST00000534538 SMC4Q9NTJ3 1288 aa22.07■■□□□ 1.12
RECQL4-207ENST00000534538 CAP1Q01518 475 aa22.06■■□□□ 1.12
RECQL4-207ENST00000534538 DCAF15Q66K64 600 aa22.06■■□□□ 1.12
RECQL4-207ENST00000534538 CDCA7LQ96GN5 454 aa22.06■■□□□ 1.12
RECQL4-207ENST00000534538 WRNIP1Q96S55 665 aa22.06■■□□□ 1.12
RECQL4-207ENST00000534538 RPAP1Q9BWH6 1393 aaPredicted RBP22.06■■□□□ 1.12
RECQL4-207ENST00000534538 WDHD1O75717 1129 aaPredicted RBP22.05■■□□□ 1.12
RECQL4-207ENST00000534538 UBTFL1P0CB47 393 aaPredicted RBP22.05■■□□□ 1.12
RECQL4-207ENST00000534538 FAM151AQ8WW52 585 aa22.05■■□□□ 1.12
RECQL4-207ENST00000534538 ZKSCAN4Q969J2 545 aaPredicted RBP22.05■■□□□ 1.12
RECQL4-207ENST00000534538 CEP126Q9P2H0 1117 aa22.05■■□□□ 1.12
RECQL4-207ENST00000534538 HDAC5Q9UQL6 1122 aa22.05■■□□□ 1.12
RECQL4-207ENST00000534538 KIAA0100Q14667 2235 aaKnown RBP22.04■■□□□ 1.12
RECQL4-207ENST00000534538 POTEFA5A3E0 1075 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms