RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
CAPN1-228ENST00000534373 ZNF70Q9UC06 446 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-228ENST00000534373 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-228ENST00000534373 MAST3O60307 1309 aa16.69■□□□□ 0.26
CAPN1-228ENST00000534373 AKAP11Q9UKA4 1901 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 TNNI2P48788 182 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 INHBEP58166 350 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 SREBF2Q12772 1141 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 PRKG1Q13976 671 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 WDR66Q8TBY9 1149 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 TEKT1Q969V4 418 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 SLC10A4Q96EP9 437 aa16.68■□□□□ 0.26
CAPN1-228ENST00000534373 TDRD3Q9H7E2 651 aaKnown RBP16.68■□□□□ 0.26
CAPN1-228ENST00000534373 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
CAPN1-228ENST00000534373 MTX1Q13505 466 aa16.67■□□□□ 0.26
CAPN1-228ENST00000534373 NBPF12Q5TAG4 269 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-228ENST00000534373 SPRYD7Q5W111 196 aa16.67■□□□□ 0.26
CAPN1-228ENST00000534373 ZDHHC15Q96MV8 337 aa16.67■□□□□ 0.26
CAPN1-228ENST00000534373 SIL1Q9H173 461 aa16.67■□□□□ 0.26
CAPN1-228ENST00000534373 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
CAPN1-228ENST00000534373 CASP8AP2Q9UKL3 1982 aa16.66■□□□□ 0.26
CAPN1-228ENST00000534373 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-228ENST00000534373 TRIM27P14373 513 aa16.66■□□□□ 0.26
CAPN1-228ENST00000534373 ATP2B3Q16720 1220 aa16.66■□□□□ 0.26
CAPN1-228ENST00000534373 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
CAPN1-228ENST00000534373 HHIPL2Q6UWX4 724 aa16.66■□□□□ 0.26
CAPN1-228ENST00000534373 AOX1Q06278 1338 aa16.66■□□□□ 0.26
CAPN1-228ENST00000534373 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
CAPN1-228ENST00000534373 SEMA3EO15041 775 aa16.65■□□□□ 0.26
CAPN1-228ENST00000534373 USP2O75604 605 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-228ENST00000534373 BCAR3O75815 825 aa16.65■□□□□ 0.26
CAPN1-228ENST00000534373 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
CAPN1-228ENST00000534373 GRIK5Q16478 980 aa16.65■□□□□ 0.26
CAPN1-228ENST00000534373 FKBP1CQ5VVH2 108 aa16.65■□□□□ 0.26
CAPN1-228ENST00000534373 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
CAPN1-228ENST00000534373 MCOLN1Q9GZU1 580 aa16.65■□□□□ 0.26
CAPN1-228ENST00000534373 MANSC4A6NHS7 340 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-228ENST00000534373 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
CAPN1-228ENST00000534373 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
CAPN1-228ENST00000534373 DGKZQ13574 1117 aa16.64■□□□□ 0.25
CAPN1-228ENST00000534373 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
CAPN1-228ENST00000534373 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-228ENST00000534373 TEPSINQ96N21 525 aa16.64■□□□□ 0.25
CAPN1-228ENST00000534373 DENND2AQ9ULE3 1009 aa16.64■□□□□ 0.25
CAPN1-228ENST00000534373 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
CAPN1-228ENST00000534373 AKAP2Q9Y2D5 859 aa16.64■□□□□ 0.25
CAPN1-228ENST00000534373 SSC5DA1L4H1 1573 aa16.64■□□□□ 0.25
CAPN1-228ENST00000534373 GNAI2P04899 355 aa16.63■□□□□ 0.25
CAPN1-228ENST00000534373 ZKSCAN2Q63HK3 967 aa16.63■□□□□ 0.25
CAPN1-228ENST00000534373 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
CAPN1-228ENST00000534373 FAM83AQ86UY5 434 aa16.63■□□□□ 0.25
CAPN1-228ENST00000534373 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
CAPN1-228ENST00000534373 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
CAPN1-228ENST00000534373 FZD1Q9UP38 647 aa16.63■□□□□ 0.25
CAPN1-228ENST00000534373 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
CAPN1-228ENST00000534373 TCP10L2B9ZVM9 353 aa16.62■□□□□ 0.25
CAPN1-228ENST00000534373 MKRN3Q13064 507 aaKnown RBP16.62■□□□□ 0.25
CAPN1-228ENST00000534373 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
CAPN1-228ENST00000534373 ZGPATQ8N5A5 531 aaKnown RBP16.61■□□□□ 0.25
CAPN1-228ENST00000534373 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
CAPN1-228ENST00000534373 TMEM39BQ9GZU3 492 aa16.61■□□□□ 0.25
CAPN1-228ENST00000534373 CCDC85CA6NKD9 419 aa16.6■□□□□ 0.25
CAPN1-228ENST00000534373 TBC1D8O95759 1140 aa16.6■□□□□ 0.25
CAPN1-228ENST00000534373 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
CAPN1-228ENST00000534373 CCDC102BQ68D86 513 aa16.6■□□□□ 0.25
CAPN1-228ENST00000534373 CTU1Q7Z7A3 348 aaKnown RBP16.6■□□□□ 0.25
CAPN1-228ENST00000534373 CLUAP1Q96AJ1 413 aa16.6■□□□□ 0.25
CAPN1-228ENST00000534373 PDS5AQ29RF7 1337 aaKnown RBP16.6■□□□□ 0.25
CAPN1-228ENST00000534373 PHKA1P46020 1223 aa16.59■□□□□ 0.25
CAPN1-228ENST00000534373 TIMM10P62072 90 aa16.59■□□□□ 0.25
CAPN1-228ENST00000534373 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
CAPN1-228ENST00000534373 PKN2Q16513 984 aaKnown RBP16.59■□□□□ 0.25
CAPN1-228ENST00000534373 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
CAPN1-228ENST00000534373 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
CAPN1-228ENST00000534373 A0A1B0GUL7 405 aa16.58■□□□□ 0.24
CAPN1-228ENST00000534373 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-228ENST00000534373 GPR25O00155 361 aa16.58■□□□□ 0.24
CAPN1-228ENST00000534373 TFCP2Q12800 502 aa16.58■□□□□ 0.24
CAPN1-228ENST00000534373 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
CAPN1-228ENST00000534373 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-228ENST00000534373 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.24
CAPN1-228ENST00000534373 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.24
CAPN1-228ENST00000534373 ZNF296Q8WUU4 475 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-228ENST00000534373 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
CAPN1-228ENST00000534373 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-228ENST00000534373 PRDX5P30044 214 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 RGS19P49795 217 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
CAPN1-228ENST00000534373 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 FAM151AQ8WW52 585 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 XAGE2Q96GT9 111 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 CSADQ9Y600 493 aa16.57■□□□□ 0.24
CAPN1-228ENST00000534373 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
CAPN1-228ENST00000534373 ADORA1P30542 326 aa16.56■□□□□ 0.24
CAPN1-228ENST00000534373 CACNB3P54284 484 aa16.56■□□□□ 0.24
CAPN1-228ENST00000534373 DCAF15Q66K64 600 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms