RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 PAGE1O75459 146 aa10.74□□□□□ -0.69
CASP4-213ENST00000534356 CELA3AP09093 270 aa10.74□□□□□ -0.69
CASP4-213ENST00000534356 PPP2R3AQ06190 1150 aa10.74□□□□□ -0.69
CASP4-213ENST00000534356 CCDC85BQ15834 202 aaPredicted RBP10.74□□□□□ -0.69
CASP4-213ENST00000534356 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
CASP4-213ENST00000534356 SV2BQ7L1I2 683 aa10.73□□□□□ -0.69
CASP4-213ENST00000534356 DDX54Q8TDD1 881 aaKnown RBP10.73□□□□□ -0.69
CASP4-213ENST00000534356 NRSN2Q9GZP1 204 aa10.73□□□□□ -0.69
CASP4-213ENST00000534356 E9PSI1 815 aa10.72□□□□□ -0.69
CASP4-213ENST00000534356 RNF225M0QZC1 329 aaPredicted RBP10.72□□□□□ -0.69
CASP4-213ENST00000534356 STK35Q8TDR2 534 aa10.72□□□□□ -0.69
CASP4-213ENST00000534356 DCAF11Q8TEB1 546 aa10.72□□□□□ -0.69
CASP4-213ENST00000534356 WISP1O95388 367 aa10.71□□□□□ -0.69
CASP4-213ENST00000534356 SELPP16109 830 aa10.71□□□□□ -0.69
CASP4-213ENST00000534356 IGF2-ASQ6U949 168 aa10.71□□□□□ -0.69
CASP4-213ENST00000534356 UBASH3BQ8TF42 649 aa10.71□□□□□ -0.69
CASP4-213ENST00000534356 ECEL1O95672 775 aa10.7□□□□□ -0.7
CASP4-213ENST00000534356 SULF2Q8IWU5 870 aa10.7□□□□□ -0.7
CASP4-213ENST00000534356 NOC4LQ9BVI4 516 aaKnown RBP10.7□□□□□ -0.7
CASP4-213ENST00000534356 USP26Q9BXU7 913 aa10.7□□□□□ -0.7
CASP4-213ENST00000534356 CYP11A1P05108 521 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 CTSBP07858 339 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 BMP6P22004 513 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 NME2P22392 152 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 MAOBP27338 520 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 GSK3AP49840 483 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 AP3B2Q13367 1082 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 POU4F3Q15319 338 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 MAP3K11Q16584 847 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 ALYREFQ86V81 257 aaKnown RBP10.69□□□□□ -0.7
CASP4-213ENST00000534356 DCAF5Q96JK2 942 aa10.69□□□□□ -0.7
CASP4-213ENST00000534356 LOC100289279A0A1B0GTE1 492 aa10.68□□□□□ -0.7
CASP4-213ENST00000534356 KRBA1A5PL33 1030 aa10.68□□□□□ -0.7
CASP4-213ENST00000534356 SCAMP3O14828 347 aaKnown RBP10.68□□□□□ -0.7
CASP4-213ENST00000534356 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
CASP4-213ENST00000534356 DLGAP3O95886 979 aa10.68□□□□□ -0.7
CASP4-213ENST00000534356 ARNTP27540 789 aa10.68□□□□□ -0.7
CASP4-213ENST00000534356 FANCCQ00597 558 aa10.68□□□□□ -0.7
CASP4-213ENST00000534356 DUOXA2Q1HG44 320 aa10.68□□□□□ -0.7
CASP4-213ENST00000534356 RASIP1Q5U651 963 aa10.68□□□□□ -0.7
CASP4-213ENST00000534356 LENG1Q96BZ8 264 aaPredicted RBP10.68□□□□□ -0.7
CASP4-213ENST00000534356 MRPL18Q9H0U6 180 aaKnown RBP10.68□□□□□ -0.7
CASP4-213ENST00000534356 APBA3O96018 575 aa10.67□□□□□ -0.7
CASP4-213ENST00000534356 ZNF76P36508 570 aa10.67□□□□□ -0.7
CASP4-213ENST00000534356 KCNMA1Q12791 1236 aa10.67□□□□□ -0.7
CASP4-213ENST00000534356 PCNX4Q63HM2 1172 aa10.67□□□□□ -0.7
CASP4-213ENST00000534356 PDZD3Q86UT5 571 aa10.67□□□□□ -0.7
CASP4-213ENST00000534356 CORO1BQ9BR76 489 aa10.67□□□□□ -0.7
CASP4-213ENST00000534356 ZC3H12CQ9C0D7 883 aaKnown RBP10.67□□□□□ -0.7
CASP4-213ENST00000534356 F6X3S4 739 aa10.66□□□□□ -0.7
CASP4-213ENST00000534356 GSTP1P09211 210 aaKnown RBP10.66□□□□□ -0.7
CASP4-213ENST00000534356 RASSF7Q02833 373 aa10.66□□□□□ -0.7
CASP4-213ENST00000534356 TTBK2Q6IQ55 1244 aa10.66□□□□□ -0.7
CASP4-213ENST00000534356 KIAA1211Q6ZU35 1233 aa10.66□□□□□ -0.7
CASP4-213ENST00000534356 ACAD11Q709F0 780 aa10.66□□□□□ -0.7
CASP4-213ENST00000534356 NPM2Q86SE8 214 aaKnown RBP10.66□□□□□ -0.7
CASP4-213ENST00000534356 GRIN3AQ8TCU5 1115 aa10.66□□□□□ -0.7
CASP4-213ENST00000534356 METTL5Q9NRN9 209 aaKnown RBP10.66□□□□□ -0.7
CASP4-213ENST00000534356 USP21Q9UK80 565 aa10.66□□□□□ -0.7
CASP4-213ENST00000534356 SAMM50Q9Y512 469 aa10.66□□□□□ -0.7
CASP4-213ENST00000534356 LIG3P49916 1009 aa10.65□□□□□ -0.7
CASP4-213ENST00000534356 NACC1Q96RE7 527 aa10.65□□□□□ -0.7
CASP4-213ENST00000534356 CBX8Q9HC52 389 aa10.65□□□□□ -0.7
CASP4-213ENST00000534356 COPRSQ9NQ92 184 aa10.65□□□□□ -0.7
CASP4-213ENST00000534356 GGT7Q9UJ14 662 aa10.65□□□□□ -0.7
CASP4-213ENST00000534356 C9orf172C9J069 976 aa10.64□□□□□ -0.71
CASP4-213ENST00000534356 ALX3O95076 343 aa10.64□□□□□ -0.71
CASP4-213ENST00000534356 ZNF252P-AS1Q0IIN9 211 aa10.64□□□□□ -0.71
CASP4-213ENST00000534356 MPRIPQ6WCQ1 1025 aa10.64□□□□□ -0.71
CASP4-213ENST00000534356 ERMP1Q7Z2K6 904 aa10.64□□□□□ -0.71
CASP4-213ENST00000534356 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.64□□□□□ -0.71
CASP4-213ENST00000534356 AGGF1Q8N302 714 aaeCLIP10.64□□□□□ -0.71
CASP4-213ENST00000534356 RNF34Q969K3 372 aa10.64□□□□□ -0.71
CASP4-213ENST00000534356 EMILIN2Q9BXX0 1053 aa10.64□□□□□ -0.71
CASP4-213ENST00000534356 F8W735 103 aaPredicted RBP10.63□□□□□ -0.71
CASP4-213ENST00000534356 HDLBPQ00341 1268 aaKnown RBP10.63□□□□□ -0.71
CASP4-213ENST00000534356 C9orf131Q5VYM1 1079 aa10.63□□□□□ -0.71
CASP4-213ENST00000534356 HS2ST1Q7LGA3 356 aa10.63□□□□□ -0.71
CASP4-213ENST00000534356 TMEM130Q8N3G9 435 aa10.63□□□□□ -0.71
CASP4-213ENST00000534356 KCNB2Q92953 911 aa10.63□□□□□ -0.71
CASP4-213ENST00000534356 RSRP1Q9BUV0 290 aa10.63□□□□□ -0.71
CASP4-213ENST00000534356 RUSC1Q9BVN2 902 aa10.63□□□□□ -0.71
CASP4-213ENST00000534356 CCDC86Q9H6F5 360 aaKnown RBP10.63□□□□□ -0.71
CASP4-213ENST00000534356 TLR6Q9Y2C9 796 aa10.63□□□□□ -0.71
CASP4-213ENST00000534356 RLBP1P12271 317 aa10.62□□□□□ -0.71
CASP4-213ENST00000534356 CHRNA4P43681 627 aa10.62□□□□□ -0.71
CASP4-213ENST00000534356 MAP1SQ66K74 1059 aaPredicted RBP10.62□□□□□ -0.71
CASP4-213ENST00000534356 LLGL2Q6P1M3 1020 aa10.62□□□□□ -0.71
CASP4-213ENST00000534356 AGMOQ6ZNB7 445 aa10.62□□□□□ -0.71
CASP4-213ENST00000534356 METTL16Q86W50 562 aaKnown RBP10.62□□□□□ -0.71
CASP4-213ENST00000534356 CYP8B1Q9UNU6 501 aa10.62□□□□□ -0.71
CASP4-213ENST00000534356 LOC100996750A0A140TA64 210 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 TCF3P15923 654 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 RPS26P62854 115 aaKnown RBP10.61□□□□□ -0.71
CASP4-213ENST00000534356 NRG1Q02297 640 aaPredicted RBP10.61□□□□□ -0.71
CASP4-213ENST00000534356 ADGRE1Q14246 886 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 PDE3AQ14432 1141 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 MBTPS1Q14703 1052 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 LRRC14Q15048 493 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 CD163Q86VB7 1156 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms