RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 USP2O75604 605 aaPredicted RBP11.12□□□□□ -0.63
COPB1-211ENST00000534234 TBC1D8O95759 1140 aa11.12□□□□□ -0.63
COPB1-211ENST00000534234 HDLBPQ00341 1268 aaKnown RBP11.12□□□□□ -0.63
COPB1-211ENST00000534234 SREBF2Q12772 1141 aa11.12□□□□□ -0.63
COPB1-211ENST00000534234 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
COPB1-211ENST00000534234 ARHGAP45Q92619 1136 aa11.12□□□□□ -0.63
COPB1-211ENST00000534234 SIL1Q9H173 461 aa11.12□□□□□ -0.63
COPB1-211ENST00000534234 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
COPB1-211ENST00000534234 LRRFIP2Q9Y608 721 aaKnown RBP11.12□□□□□ -0.63
COPB1-211ENST00000534234 COL1A1P02452 1464 aaPredicted RBP11.12□□□□□ -0.63
COPB1-211ENST00000534234 KIF16BQ96L93 1317 aa11.12□□□□□ -0.63
COPB1-211ENST00000534234 UNCXA6NJT0 531 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 TCP10L2B9ZVM9 353 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 SLC5A1P13866 664 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 IREB2P48200 963 aaKnown RBP11.11□□□□□ -0.63
COPB1-211ENST00000534234 TEKT1Q969V4 418 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 CLMNQ96JQ2 1002 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 MEIS3Q99687 375 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 MRIQ9BWK5 157 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 CEP126Q9P2H0 1117 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 ZNF646O15015 1829 aaPredicted RBP11.11□□□□□ -0.63
COPB1-211ENST00000534234 CIAO1O76071 339 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 TNNI2P48788 182 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 INHBEP58166 350 aa11.11□□□□□ -0.63
COPB1-211ENST00000534234 INTS3Q68E01 1043 aaKnown RBP11.11□□□□□ -0.63
COPB1-211ENST00000534234 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
COPB1-211ENST00000534234 IPO8O15397 1037 aaKnown RBP11.1□□□□□ -0.63
COPB1-211ENST00000534234 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
COPB1-211ENST00000534234 IL15P40933 162 aaPredicted RBP11.1□□□□□ -0.63
COPB1-211ENST00000534234 CTU1Q7Z7A3 348 aaKnown RBP11.1□□□□□ -0.63
COPB1-211ENST00000534234 ANKRD13AQ8IZ07 590 aa11.1□□□□□ -0.63
COPB1-211ENST00000534234 WDR66Q8TBY9 1149 aa11.1□□□□□ -0.63
COPB1-211ENST00000534234 ZNF296Q8WUU4 475 aaPredicted RBP11.1□□□□□ -0.63
COPB1-211ENST00000534234 TEPSINQ96N21 525 aa11.1□□□□□ -0.63
COPB1-211ENST00000534234 TMEM39BQ9GZU3 492 aa11.1□□□□□ -0.63
COPB1-211ENST00000534234 PA2G4Q9UQ80 394 aaKnown RBP11.1□□□□□ -0.63
COPB1-211ENST00000534234 SUGT1Q9Y2Z0 365 aa11.1□□□□□ -0.63
COPB1-211ENST00000534234 GPR25O00155 361 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 BCAR3O75815 825 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 GNAI3P08754 354 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 CACNB3P54284 484 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 ATP2B3Q16720 1220 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 APOBEC3HQ6NTF7 200 aaKnown RBP11.09□□□□□ -0.63
COPB1-211ENST00000534234 HHIPL2Q6UWX4 724 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 CDAN1Q8IWY9 1227 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 FRAT1Q92837 279 aaPredicted RBP11.09□□□□□ -0.63
COPB1-211ENST00000534234 WNK4Q96J92 1243 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 COPRSQ9NQ92 184 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 GNL3LQ9NVN8 582 aaKnown RBP11.09□□□□□ -0.63
COPB1-211ENST00000534234 SSC5DA1L4H1 1573 aa11.09□□□□□ -0.63
COPB1-211ENST00000534234 MAST3O60307 1309 aa11.08□□□□□ -0.63
COPB1-211ENST00000534234 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.64
COPB1-211ENST00000534234 MIER1Q8N108 512 aa11.08□□□□□ -0.64
COPB1-211ENST00000534234 R3HDMLQ9H3Y0 253 aa11.08□□□□□ -0.64
COPB1-211ENST00000534234 TMOD2Q9NZR1 351 aa11.08□□□□□ -0.64
COPB1-211ENST00000534234 SRGAP3O43295 1099 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 TRIM27P14373 513 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 RGS19P49795 217 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 ATF7IPQ6VMQ6 1270 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.07□□□□□ -0.64
COPB1-211ENST00000534234 IFNL1Q8IU54 200 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 CLUAP1Q96AJ1 413 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 CFHR5Q9BXR6 569 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 ELP3Q9H9T3 547 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 FKTNO75072 461 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 GJA5P36382 358 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 TIMM10P62072 90 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 MLLT1Q03111 559 aaPredicted RBP11.07□□□□□ -0.64
COPB1-211ENST00000534234 FKBP1CQ5VVH2 108 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
COPB1-211ENST00000534234 OTUD7BQ6GQQ9 843 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 FAM83AQ86UY5 434 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 DENND2AQ9ULE3 1009 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 TNNQ9UQP3 1299 aa11.07□□□□□ -0.64
COPB1-211ENST00000534234 A0A1B0GUL6 1792 aa11.06□□□□□ -0.64
COPB1-211ENST00000534234 CASP8AP2Q9UKL3 1982 aa11.06□□□□□ -0.64
COPB1-211ENST00000534234 IGF2BP3O00425 579 aaKnown RBP eCLIP11.06□□□□□ -0.64
COPB1-211ENST00000534234 LDHBP07195 334 aaKnown RBP11.06□□□□□ -0.64
COPB1-211ENST00000534234 PRDX5P30044 214 aa11.06□□□□□ -0.64
COPB1-211ENST00000534234 PHKA1P46020 1223 aa11.06□□□□□ -0.64
COPB1-211ENST00000534234 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
COPB1-211ENST00000534234 MTX1Q13505 466 aa11.06□□□□□ -0.64
COPB1-211ENST00000534234 PKN2Q16513 984 aaKnown RBP11.06□□□□□ -0.64
COPB1-211ENST00000534234 CCDC102BQ68D86 513 aa11.06□□□□□ -0.64
COPB1-211ENST00000534234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.06□□□□□ -0.64
COPB1-211ENST00000534234 OPTNQ96CV9 577 aa11.06□□□□□ -0.64
COPB1-211ENST00000534234 SEMA3EO15041 775 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 GNAI2P04899 355 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 ADORA1P30542 326 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 TFCP2Q12800 502 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 VGLL4Q14135 290 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 HOOK2Q96ED9 719 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 PTPN18Q99952 460 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 AKAP2Q9Y2D5 859 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 DAGLAQ9Y4D2 1042 aa11.05□□□□□ -0.64
COPB1-211ENST00000534234 CSADQ9Y600 493 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms