RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 RUSC1Q9BVN2 902 aa7.15□□□□□ -1.26
ATPAF1-211ENST00000534216 SRCIN1Q9C0H9 1055 aa7.15□□□□□ -1.26
ATPAF1-211ENST00000534216 ZFYVE1Q9HBF4 777 aa7.15□□□□□ -1.26
ATPAF1-211ENST00000534216 MEGF11A6BM72 1044 aa7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 DLGAP3O95886 979 aa7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 CYP11A1P05108 521 aa7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 C3orf58Q8NDZ4 430 aa7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 DDX54Q8TDD1 881 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 UBL7Q96S82 380 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 TRIM56Q9BRZ2 755 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 CEP41Q9BYV8 373 aa7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 RNF208Q9H0X6 261 aa7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 SPG7Q9UQ90 795 aa7.14□□□□□ -1.27
ATPAF1-211ENST00000534216 K7ELQ4 463 aaPredicted RBP7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 H2AFB1P0C5Y9 115 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 H2AFB2P0C5Z0 115 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 MAOBP27338 520 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 GSTT1P30711 240 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 ZNF157P51786 506 aaPredicted RBP7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 FGD1P98174 961 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 POU4F3Q15319 338 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 ANKRD34AQ69YU3 496 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 FRMD6Q96NE9 622 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 TMPRSS13Q9BYE2 586 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 AKAP2Q9Y2D5 859 aa7.13□□□□□ -1.27
ATPAF1-211ENST00000534216 ADAM23O75077 832 aa7.12□□□□□ -1.27
ATPAF1-211ENST00000534216 ERCC3P19447 782 aa7.12□□□□□ -1.27
ATPAF1-211ENST00000534216 GNA15P30679 374 aa7.12□□□□□ -1.27
ATPAF1-211ENST00000534216 DUSP9Q99956 384 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-211ENST00000534216 C12orf49Q9H741 205 aa7.12□□□□□ -1.27
ATPAF1-211ENST00000534216 DYRK3O43781 588 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 CTSBP07858 339 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 AP3B2Q13367 1082 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 FBXO33Q7Z6M2 555 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 FAM46AQ96IP4 442 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 CORO1BQ9BR76 489 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 SEMA6BQ9H3T3 888 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 SUGCTQ9HAC7 445 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 RNF19AQ9NV58 838 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 TMEM39AQ9NV64 488 aa7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 GPN3Q9UHW5 284 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-211ENST00000534216 ECEL1O95672 775 aa7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 PREPP48147 710 aa7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 PPP2R3AQ06190 1150 aa7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 UVSSAQ2YD98 709 aa7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 EXOSC6Q5RKV6 272 aaKnown RBP7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 FDX2Q6P4F2 183 aa7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 ARMC10Q8N2F6 343 aa7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 FAM8A1Q9UBU6 413 aa7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 PPM1HQ9ULR3 514 aa7.1□□□□□ -1.27
ATPAF1-211ENST00000534216 SART1O43290 800 aaKnown RBP7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 TIAF1O95411 115 aa7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 USP17L7P0C7H9 530 aa7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 HP1BP3Q5SSJ5 553 aaPredicted RBP7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 LCE3BQ5TA77 95 aa7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 PRR23CQ6ZRP0 262 aa7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 CYP4F12Q9HCS2 524 aa7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 AK5Q9Y6K8 562 aa7.09□□□□□ -1.27
ATPAF1-211ENST00000534216 EIF4BP23588 611 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-211ENST00000534216 ITGB7P26010 798 aa7.08□□□□□ -1.28
ATPAF1-211ENST00000534216 C12orf50Q8NA57 414 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-211ENST00000534216 ANKRD24Q8TF21 1146 aa7.08□□□□□ -1.28
ATPAF1-211ENST00000534216 UTP4Q969X6 686 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-211ENST00000534216 MYRFLQ96LU7 910 aa7.08□□□□□ -1.28
ATPAF1-211ENST00000534216 NECAB3Q96P71 396 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-211ENST00000534216 PARP2Q9UGN5 583 aa7.08□□□□□ -1.28
ATPAF1-211ENST00000534216 DHX15O43143 795 aaKnown RBP7.07□□□□□ -1.28
ATPAF1-211ENST00000534216 TAGLNQ01995 201 aaKnown RBP7.07□□□□□ -1.28
ATPAF1-211ENST00000534216 TPTE2Q6XPS3 522 aa7.07□□□□□ -1.28
ATPAF1-211ENST00000534216 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.07□□□□□ -1.28
ATPAF1-211ENST00000534216 CEP44Q9C0F1 390 aa7.07□□□□□ -1.28
ATPAF1-211ENST00000534216 ENC1O14682 589 aa7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 FBXO24O75426 580 aa7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 GSTP1P09211 210 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 DRD2P14416 443 aa7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 DAB2P98082 770 aa7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 PDE3AQ14432 1141 aa7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 SULF2Q8IWU5 870 aa7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 STK35Q8TDR2 534 aa7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 ZC3H12CQ9C0D7 883 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 CCDC86Q9H6F5 360 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 RAXQ9Y2V3 346 aa7.06□□□□□ -1.28
ATPAF1-211ENST00000534216 BTBD11A6QL63 1104 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 GAS2O43903 313 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 ADH5P11766 374 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 BMP3P12645 472 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 NME2P22392 152 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 ARNTP27540 789 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 XPCQ01831 940 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 SOX4Q06945 474 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 TRIM26Q12899 539 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 PSMD2Q13200 908 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 PRSS36Q5K4E3 855 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 PDZD3Q86UT5 571 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 FAM20CQ8IXL6 584 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 RAD18Q9NS91 495 aa7.05□□□□□ -1.28
ATPAF1-211ENST00000534216 HIF3AQ9Y2N7 669 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms