RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 ARID4AP29374 1257 aaPredicted RBP12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 ADORA1P30542 326 aa12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 OGFOD1Q8N543 542 aa12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 GPR101Q96P66 508 aaPredicted RBP12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 CD209Q9NNX6 404 aa12.16□□□□□ -0.46
LDLRAD3-206ENST00000534091 SGSM2O43147 1006 aa12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 MAP4K4O95819 1239 aaPredicted RBP12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 USP17L8P0C7I0 530 aa12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 UQCRFS1P1P0C7P4 283 aa12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 TTC39AQ5SRH9 613 aa12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 DACT2Q5SW24 774 aa12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 KBTBD3Q8NAB2 608 aa12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 DIAPH3Q9NSV4 1193 aa12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 ZNF646O15015 1829 aaPredicted RBP12.15□□□□□ -0.46
LDLRAD3-206ENST00000534091 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 KIF4BQ2VIQ3 1234 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 GORABQ5T7V8 394 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 TTLL5Q6EMB2 1281 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 TXNRD3Q86VQ6 643 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 IL17RAQ96F46 866 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 FSD1Q9BTV5 496 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 KCNQ5Q9NR82 932 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 PAG1Q9NWQ8 432 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 HDAC9Q9UKV0 1011 aa12.14□□□□□ -0.47
LDLRAD3-206ENST00000534091 TAF5LO75529 589 aa12.13□□□□□ -0.47
LDLRAD3-206ENST00000534091 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
LDLRAD3-206ENST00000534091 LRRFIP1Q32MZ4 808 aaKnown RBP12.13□□□□□ -0.47
LDLRAD3-206ENST00000534091 CCDC102BQ68D86 513 aa12.13□□□□□ -0.47
LDLRAD3-206ENST00000534091 TRPM4Q8TD43 1214 aa12.13□□□□□ -0.47
LDLRAD3-206ENST00000534091 DCPSQ96C86 337 aaKnown RBP12.13□□□□□ -0.47
LDLRAD3-206ENST00000534091 HHIPL1Q96JK4 782 aa12.13□□□□□ -0.47
LDLRAD3-206ENST00000534091 DNAJC2Q99543 621 aaKnown RBP12.13□□□□□ -0.47
LDLRAD3-206ENST00000534091 FAM205AQ6ZU69 1335 aa12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 RASSF10A6NK89 507 aa12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 HIBADHP31937 336 aaKnown RBP12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 CAVIN4Q5BKX8 364 aa12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 HELBQ8NG08 1087 aaPredicted RBP12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 TDRD7Q8NHU6 1098 aaKnown RBP12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 CNTNAP1P78357 1384 aa12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 POLR2AP24928 1970 aaKnown RBP12.12□□□□□ -0.47
LDLRAD3-206ENST00000534091 MAST2Q6P0Q8 1798 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 WTIPA6NIX2 430 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 GOLIM4O00461 696 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 ZFYP08048 801 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 MCAMP43121 646 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 PHKA1P46020 1223 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 ANAPC15P60006 121 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 GTF2IP78347 998 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 NMIQ13287 307 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 FBXO33Q7Z6M2 555 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 MTMR14Q8NCE2 650 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 TBC1D22AQ8WUA7 517 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 LSG1Q9H089 658 aaKnown RBP12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 IL25Q9H293 177 aa12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
LDLRAD3-206ENST00000534091 SEMA3EO15041 775 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 KCNA4P22459 653 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 MCCP23508 829 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 KLRK1P26718 216 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 ECE1P42892 770 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 SCARF1Q14162 830 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 TBC1D10BQ4KMP7 808 aaPredicted RBP12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 VPS37DQ86XT2 251 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 EDC3Q96F86 508 aaKnown RBP12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 FAM84BQ96KN1 310 aaPredicted RBP12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 KIF2CQ99661 725 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 ANO2Q9NQ90 1003 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 HELLSQ9NRZ9 838 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 SUGT1Q9Y2Z0 365 aa12.1□□□□□ -0.47
LDLRAD3-206ENST00000534091 COL1A1P02452 1464 aaPredicted RBP12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 A0A0D9SFI3 127 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 IGSF3O75054 1194 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 ZAP70P43403 619 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 FKBP1BP68106 108 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 ZMYM1Q5SVZ6 1142 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 KIAA1211Q6ZU35 1233 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 MRIQ9BWK5 157 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 TLL2Q9Y6L7 1015 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 ECM29Q5VYK3 1845 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 CCDC171Q6TFL3 1326 aa12.09□□□□□ -0.47
LDLRAD3-206ENST00000534091 SHTN1A0MZ66 631 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 RNF113AO15541 343 aaKnown RBP12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 HSPA4P34932 840 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 HDLBPQ00341 1268 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms