RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 PTPRCP08575 1304 aa21.21■□□□□ 0.99
CAPRIN1-216ENST00000534042 ARAP2Q8WZ64 1704 aa21.21■□□□□ 0.99
CAPRIN1-216ENST00000534042 TCP10L2B9ZVM9 353 aa21.2■□□□□ 0.98
CAPRIN1-216ENST00000534042 GJA5P36382 358 aa21.2■□□□□ 0.98
CAPRIN1-216ENST00000534042 TNNI2P48788 182 aa21.2■□□□□ 0.98
CAPRIN1-216ENST00000534042 CHAF1AQ13111 956 aaPredicted RBP21.2■□□□□ 0.98
CAPRIN1-216ENST00000534042 TBC1D22AQ8WUA7 517 aa21.2■□□□□ 0.98
CAPRIN1-216ENST00000534042 ELP3Q9H9T3 547 aa21.19■□□□□ 0.98
CAPRIN1-216ENST00000534042 TRIM17Q9Y577 477 aa21.19■□□□□ 0.98
CAPRIN1-216ENST00000534042 OTOFQ9HC10 1997 aa21.18■□□□□ 0.98
CAPRIN1-216ENST00000534042 TNRC18O15417 2968 aaPredicted RBP21.18■□□□□ 0.98
CAPRIN1-216ENST00000534042 PDE8BO95263 885 aa21.18■□□□□ 0.98
CAPRIN1-216ENST00000534042 HDLBPQ00341 1268 aaKnown RBP21.18■□□□□ 0.98
CAPRIN1-216ENST00000534042 TEPSINQ96N21 525 aa21.18■□□□□ 0.98
CAPRIN1-216ENST00000534042 E9PSI1 815 aa21.17■□□□□ 0.98
CAPRIN1-216ENST00000534042 GRIK5Q16478 980 aa21.17■□□□□ 0.98
CAPRIN1-216ENST00000534042 VGLL2Q8N8G2 317 aa21.17■□□□□ 0.98
CAPRIN1-216ENST00000534042 SSH1Q8WYL5 1049 aa21.17■□□□□ 0.98
CAPRIN1-216ENST00000534042 OPTNQ96CV9 577 aa21.17■□□□□ 0.98
CAPRIN1-216ENST00000534042 ERO1AQ96HE7 468 aa21.17■□□□□ 0.98
CAPRIN1-216ENST00000534042 TMEM39BQ9GZU3 492 aa21.17■□□□□ 0.98
CAPRIN1-216ENST00000534042 USP44Q9H0E7 712 aa21.17■□□□□ 0.98
CAPRIN1-216ENST00000534042 TESPA1A2RU30 521 aaPredicted RBP21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 BCAMP50895 628 aa21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 CRHR2Q13324 411 aa21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 OTOP1Q7RTM1 612 aa21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 CDAN1Q8IWY9 1227 aa21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 KLHDC4Q8TBB5 520 aa21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 TEKT1Q969V4 418 aa21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 PTPN18Q99952 460 aa21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 KIAA0100Q14667 2235 aaKnown RBP21.16■□□□□ 0.98
CAPRIN1-216ENST00000534042 IFIT1P09914 478 aaKnown RBP21.15■□□□□ 0.98
CAPRIN1-216ENST00000534042 MAP3K9P80192 1104 aa21.15■□□□□ 0.98
CAPRIN1-216ENST00000534042 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.15■□□□□ 0.98
CAPRIN1-216ENST00000534042 PUM3Q15397 648 aaKnown RBP21.14■□□□□ 0.97
CAPRIN1-216ENST00000534042 MS4A4AQ96JQ5 239 aa21.14■□□□□ 0.97
CAPRIN1-216ENST00000534042 MRIQ9BWK5 157 aa21.14■□□□□ 0.97
CAPRIN1-216ENST00000534042 TMOD2Q9NZR1 351 aa21.14■□□□□ 0.97
CAPRIN1-216ENST00000534042 CSADQ9Y600 493 aa21.14■□□□□ 0.97
CAPRIN1-216ENST00000534042 MAST3O60307 1309 aa21.13■□□□□ 0.97
CAPRIN1-216ENST00000534042 CACNB3P54284 484 aa21.13■□□□□ 0.97
CAPRIN1-216ENST00000534042 VGLL4Q14135 290 aa21.13■□□□□ 0.97
CAPRIN1-216ENST00000534042 PRPF38BQ5VTL8 546 aaKnown RBP21.13■□□□□ 0.97
CAPRIN1-216ENST00000534042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.13■□□□□ 0.97
CAPRIN1-216ENST00000534042 CD99L2Q8TCZ2 262 aa21.13■□□□□ 0.97
CAPRIN1-216ENST00000534042 SUGT1Q9Y2Z0 365 aa21.13■□□□□ 0.97
CAPRIN1-216ENST00000534042 KIF16BQ96L93 1317 aa21.12■□□□□ 0.97
CAPRIN1-216ENST00000534042 EYA2O00167 538 aa21.12■□□□□ 0.97
CAPRIN1-216ENST00000534042 FGFR2P21802 821 aa21.12■□□□□ 0.97
CAPRIN1-216ENST00000534042 GTF2A2P52657 109 aa21.12■□□□□ 0.97
CAPRIN1-216ENST00000534042 SP3Q02447 781 aa21.12■□□□□ 0.97
CAPRIN1-216ENST00000534042 SLFN5Q08AF3 891 aa21.12■□□□□ 0.97
CAPRIN1-216ENST00000534042 CNKSR2Q8WXI2 1034 aa21.12■□□□□ 0.97
CAPRIN1-216ENST00000534042 ZDHHC15Q96MV8 337 aa21.12■□□□□ 0.97
CAPRIN1-216ENST00000534042 CCL15-CCL14A0A0B4J2E2 113 aa21.11■□□□□ 0.97
CAPRIN1-216ENST00000534042 SLC5A1P13866 664 aa21.11■□□□□ 0.97
CAPRIN1-216ENST00000534042 CCL15Q16663 113 aa21.11■□□□□ 0.97
CAPRIN1-216ENST00000534042 ALDH1L2Q3SY69 923 aa21.11■□□□□ 0.97
CAPRIN1-216ENST00000534042 INTS3Q68E01 1043 aaKnown RBP21.11■□□□□ 0.97
CAPRIN1-216ENST00000534042 BRI3BPQ8WY22 251 aa21.11■□□□□ 0.97
CAPRIN1-216ENST00000534042 EFCC1Q9HA90 598 aa21.11■□□□□ 0.97
CAPRIN1-216ENST00000534042 PTPN22Q9Y2R2 807 aa21.11■□□□□ 0.97
CAPRIN1-216ENST00000534042 MYH13Q9UKX3 1938 aa21.1■□□□□ 0.97
CAPRIN1-216ENST00000534042 RFX5P48382 616 aaPredicted RBP21.1■□□□□ 0.97
CAPRIN1-216ENST00000534042 HHIPL2Q6UWX4 724 aa21.1■□□□□ 0.97
CAPRIN1-216ENST00000534042 FAM83AQ86UY5 434 aa21.1■□□□□ 0.97
CAPRIN1-216ENST00000534042 HOOK2Q96ED9 719 aa21.1■□□□□ 0.97
CAPRIN1-216ENST00000534042 OTUD5Q96G74 571 aa21.1■□□□□ 0.97
CAPRIN1-216ENST00000534042 TAF1CQ15572 869 aaPredicted RBP21.09■□□□□ 0.97
CAPRIN1-216ENST00000534042 FKBP1CQ5VVH2 108 aa21.09■□□□□ 0.97
CAPRIN1-216ENST00000534042 APOBEC3HQ6NTF7 200 aaKnown RBP21.09■□□□□ 0.97
CAPRIN1-216ENST00000534042 WDR66Q8TBY9 1149 aa21.09■□□□□ 0.97
CAPRIN1-216ENST00000534042 LPIN2Q92539 896 aa21.09■□□□□ 0.97
CAPRIN1-216ENST00000534042 ZFYVE28Q9HCC9 887 aa21.09■□□□□ 0.97
CAPRIN1-216ENST00000534042 SMC4Q9NTJ3 1288 aa21.09■□□□□ 0.97
CAPRIN1-216ENST00000534042 SPDYE5A6NIY4 337 aa21.08■□□□□ 0.97
CAPRIN1-216ENST00000534042 WRNIP1Q96S55 665 aa21.08■□□□□ 0.97
CAPRIN1-216ENST00000534042 AK9Q5TCS8 1911 aa21.08■□□□□ 0.96
CAPRIN1-216ENST00000534042 ARHGEF6Q15052 776 aa21.07■□□□□ 0.96
CAPRIN1-216ENST00000534042 DCAF15Q66K64 600 aa21.07■□□□□ 0.96
CAPRIN1-216ENST00000534042 ERO1BQ86YB8 467 aa21.07■□□□□ 0.96
CAPRIN1-216ENST00000534042 FAM43AQ8N2R8 423 aa21.07■□□□□ 0.96
CAPRIN1-216ENST00000534042 CDCA7LQ96GN5 454 aa21.07■□□□□ 0.96
CAPRIN1-216ENST00000534042 SNCAIPQ9Y6H5 919 aa21.07■□□□□ 0.96
CAPRIN1-216ENST00000534042 WDHD1O75717 1129 aaPredicted RBP21.06■□□□□ 0.96
CAPRIN1-216ENST00000534042 UBTFL1P0CB47 393 aaPredicted RBP21.06■□□□□ 0.96
CAPRIN1-216ENST00000534042 CETPP11597 493 aa21.06■□□□□ 0.96
CAPRIN1-216ENST00000534042 ATG9AQ7Z3C6 839 aa21.06■□□□□ 0.96
CAPRIN1-216ENST00000534042 POTEFA5A3E0 1075 aa21.05■□□□□ 0.96
CAPRIN1-216ENST00000534042 ZKSCAN4Q969J2 545 aaPredicted RBP21.05■□□□□ 0.96
CAPRIN1-216ENST00000534042 ARMC5Q96C12 935 aa21.05■□□□□ 0.96
CAPRIN1-216ENST00000534042 SIL1Q9H173 461 aa21.05■□□□□ 0.96
CAPRIN1-216ENST00000534042 CEP126Q9P2H0 1117 aa21.05■□□□□ 0.96
CAPRIN1-216ENST00000534042 FBXO3Q9UK99 471 aa21.05■□□□□ 0.96
CAPRIN1-216ENST00000534042 CAP1Q01518 475 aa21.04■□□□□ 0.96
CAPRIN1-216ENST00000534042 ZNF341Q9BYN7 854 aa21.04■□□□□ 0.96
CAPRIN1-216ENST00000534042 GNL3LQ9NVN8 582 aaKnown RBP21.04■□□□□ 0.96
CAPRIN1-216ENST00000534042 RPAP1Q9BWH6 1393 aaPredicted RBP21.04■□□□□ 0.96
CAPRIN1-216ENST00000534042 IRF6O14896 467 aa21.03■□□□□ 0.96
CAPRIN1-216ENST00000534042 CIAO1O76071 339 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms