RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 ITGA6P23229 1130 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 FUT2Q10981 343 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 CCDC144BQ3MJ40 725 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 CCDC144CPQ8IYA2 1237 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 LINC00301Q8NCQ3 95 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 BPIFA3Q9BQP9 254 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 ATP6V1DQ9Y5K8 247 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 ATAD5Q96QE3 1844 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 SPATA31A5Q5VU36 1347 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 PNPLA7Q6ZV29 1317 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 SPATA31A7Q8IWB4 1347 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 CTIFO43310 598 aaKnown RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 PHF14O94880 888 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 IFIT1P09914 478 aaKnown RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 PDCP20941 246 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 CDC27P30260 824 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 KRT85P78386 507 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 SUSD4Q5VX71 490 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 MARCH10Q8NA82 808 aaPredicted RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 FAM200AQ8TCP9 573 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 BTG4Q9NY30 223 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 A0A1W2PQ27 194 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 A0A1W2PQ64 194 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 A0A1W2PQD8 194 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 ZFYP08048 801 aaPredicted RBP8.43□□□□□ -1.06
RNPC3-209ENST00000533834 U2AF2P26368 475 aaKnown RBP eCLIP8.43□□□□□ -1.068e-10■■■■□ 20.5
RNPC3-209ENST00000533834 C3orf67Q6ZVT6 689 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 FERMT3Q86UX7 667 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 SYAP1Q96A49 352 aaPredicted RBP8.43□□□□□ -1.06
RNPC3-209ENST00000533834 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 UBE2Q2LH0YL09 131 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 NPY5RQ15761 445 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 WDHD1O75717 1129 aaPredicted RBP8.43□□□□□ -1.06
RNPC3-209ENST00000533834 TPM2P07951 284 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 PHKA1P46020 1223 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 KIF23Q02241 960 aaPredicted RBP8.43□□□□□ -1.06
RNPC3-209ENST00000533834 GJB4Q9NTQ9 266 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 DDX19AQ9NUU7 478 aaKnown RBP8.43□□□□□ -1.06
RNPC3-209ENST00000533834 STK36Q9NRP7 1315 aa8.43□□□□□ -1.06
RNPC3-209ENST00000533834 WTIPA6NIX2 430 aaPredicted RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 GPAA1O43292 621 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 RBM6P78332 1123 aaKnown RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 STK3Q13188 491 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 BARGINQ6ZT62 677 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 LUZP1Q86V48 1076 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 AMIGO3Q86WK7 504 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 FBXO18Q8NFZ0 1043 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 TFIP11Q9UBB9 837 aaKnown RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 ANAPC4Q9UJX5 808 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 PCDHA7Q9UN72 937 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 PSME4Q14997 1843 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 GSG1L2A8MUP6 293 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 REM2Q8IYK8 340 aaPredicted RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 MED15Q96RN5 788 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 THRAP3Q9Y2W1 955 aaKnown RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 CLIC4Q9Y696 253 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 RGPD3A6NKT7 1758 aaPredicted RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 RGPD4Q7Z3J3 1758 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 SMIM22K7EJ46 135 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 FANCGO15287 622 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 PDE8AO60658 829 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 NCLP19338 710 aaKnown RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 ZNF75DP51815 510 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 RASGRF1Q13972 1273 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 SEC23AQ15436 765 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 CHST3Q7LGC8 479 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 ELOA2Q8IYF1 753 aaPredicted RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 C17orf53Q8N3J3 647 aaPredicted RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 ZNF830Q96NB3 372 aaPredicted RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 TTC12Q9H892 705 aaPredicted RBP8.42□□□□□ -1.06
RNPC3-209ENST00000533834 TUBE1Q9UJT0 475 aa8.42□□□□□ -1.06
RNPC3-209ENST00000533834 BMP6P22004 513 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 TOB1P50616 345 aaPredicted RBP8.41□□□□□ -1.06
RNPC3-209ENST00000533834 TNFRSF25Q93038 417 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 NRBP1Q9UHY1 535 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 MROH5Q6ZUA9 1318 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 CCZ1BP86790 482 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 CCZ1P86791 482 aaPredicted RBP8.41□□□□□ -1.06
RNPC3-209ENST00000533834 ANO6Q4KMQ2 910 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 MYRIPQ8NFW9 859 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 SPATA20Q8TB22 786 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 RIOK1Q9BRS2 568 aaKnown RBP8.41□□□□□ -1.06
RNPC3-209ENST00000533834 PDS5AQ29RF7 1337 aaKnown RBP8.41□□□□□ -1.06
RNPC3-209ENST00000533834 VPS37CA5D8V6 355 aaPredicted RBP8.41□□□□□ -1.06
RNPC3-209ENST00000533834 PDE6AP16499 860 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 HMGN5P82970 282 aaKnown RBP8.41□□□□□ -1.06
RNPC3-209ENST00000533834 MAP3K11Q16584 847 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 NT5DC1Q5TFE4 455 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 ADALQ6DHV7 355 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 NYAP1Q6ZVC0 841 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 SPATA32Q96LK8 384 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms