RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 ERO1BQ86YB8 467 aa13.86□□□□□ -0.19
CSDE1-215ENST00000533818 PLBD2Q8NHP8 589 aa13.86□□□□□ -0.19
CSDE1-215ENST00000533818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.86□□□□□ -0.19
CSDE1-215ENST00000533818 PXYLP1Q8TE99 480 aa13.86□□□□□ -0.19
CSDE1-215ENST00000533818 C11orf49Q9H6J7 331 aa13.86□□□□□ -0.19
CSDE1-215ENST00000533818 F8W031 263 aaPredicted RBP13.85□□□□□ -0.19
CSDE1-215ENST00000533818 PDHXO00330 501 aa13.85□□□□□ -0.19
CSDE1-215ENST00000533818 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
CSDE1-215ENST00000533818 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.19
CSDE1-215ENST00000533818 CNGB1Q14028 1251 aaPredicted RBP13.85□□□□□ -0.19
CSDE1-215ENST00000533818 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
CSDE1-215ENST00000533818 ARIH1Q9Y4X5 557 aaPredicted RBP13.85□□□□□ -0.19
CSDE1-215ENST00000533818 AOX1Q06278 1338 aa13.85□□□□□ -0.19
CSDE1-215ENST00000533818 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
CSDE1-215ENST00000533818 RBM5P52756 815 aaKnown RBP eCLIP13.84□□□□□ -0.19
CSDE1-215ENST00000533818 TNFAIP1Q13829 316 aa13.84□□□□□ -0.19
CSDE1-215ENST00000533818 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
CSDE1-215ENST00000533818 CERS5Q8N5B7 392 aa13.84□□□□□ -0.19
CSDE1-215ENST00000533818 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.84□□□□□ -0.199e-6■■□□□ 13.2
CSDE1-215ENST00000533818 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
CSDE1-215ENST00000533818 COL2A1P02458 1487 aaPredicted RBP13.83□□□□□ -0.2
CSDE1-215ENST00000533818 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.2
CSDE1-215ENST00000533818 CDAN1Q8IWY9 1227 aa13.83□□□□□ -0.2
CSDE1-215ENST00000533818 ZBTB38Q8NAP3 1195 aaPredicted RBP13.83□□□□□ -0.2
CSDE1-215ENST00000533818 TEPSINQ96N21 525 aa13.83□□□□□ -0.2
CSDE1-215ENST00000533818 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
CSDE1-215ENST00000533818 PIEZO1Q92508 2521 aa13.83□□□□□ -0.2
CSDE1-215ENST00000533818 PPIL2Q13356 520 aa13.82□□□□□ -0.2
CSDE1-215ENST00000533818 IRF5Q13568 498 aa13.82□□□□□ -0.2
CSDE1-215ENST00000533818 LBHD1Q9BQE6 289 aaPredicted RBP13.82□□□□□ -0.2
CSDE1-215ENST00000533818 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
CSDE1-215ENST00000533818 SNCAIPQ9Y6H5 919 aa13.82□□□□□ -0.2
CSDE1-215ENST00000533818 OTOFQ9HC10 1997 aa13.82□□□□□ -0.2
CSDE1-215ENST00000533818 PER1O15534 1290 aaPredicted RBP13.81□□□□□ -0.2
CSDE1-215ENST00000533818 PDE8AO60658 829 aa13.81□□□□□ -0.2
CSDE1-215ENST00000533818 BCRP11274 1271 aa13.81□□□□□ -0.2
CSDE1-215ENST00000533818 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.81□□□□□ -0.2
CSDE1-215ENST00000533818 ZKSCAN4Q969J2 545 aaPredicted RBP13.81□□□□□ -0.2
CSDE1-215ENST00000533818 CDC5LQ99459 802 aaKnown RBP13.81□□□□□ -0.2
CSDE1-215ENST00000533818 C1QTNF1Q9BXJ1 281 aa13.81□□□□□ -0.2
CSDE1-215ENST00000533818 TTYH1Q9H313 450 aaPredicted RBP13.81□□□□□ -0.2
CSDE1-215ENST00000533818 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
CSDE1-215ENST00000533818 ZNF70Q9UC06 446 aaPredicted RBP13.81□□□□□ -0.2
CSDE1-215ENST00000533818 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
CSDE1-215ENST00000533818 HCN4Q9Y3Q4 1203 aa13.81□□□□□ -0.2
CSDE1-215ENST00000533818 BDP1A6H8Y1 2624 aa13.8□□□□□ -0.2
CSDE1-215ENST00000533818 KLRK1P26718 216 aa13.8□□□□□ -0.2
CSDE1-215ENST00000533818 USP38Q8NB14 1042 aa13.8□□□□□ -0.2
CSDE1-215ENST00000533818 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
CSDE1-215ENST00000533818 TNPO2O14787 897 aaKnown RBP13.79□□□□□ -0.2
CSDE1-215ENST00000533818 NEFMP07197 916 aa13.79□□□□□ -0.2
CSDE1-215ENST00000533818 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
CSDE1-215ENST00000533818 ADAMTS19Q8TE59 1207 aa13.79□□□□□ -0.2
CSDE1-215ENST00000533818 WRNIP1Q96S55 665 aa13.79□□□□□ -0.2
CSDE1-215ENST00000533818 CD209Q9NNX6 404 aa13.79□□□□□ -0.2
CSDE1-215ENST00000533818 TCP10L2B9ZVM9 353 aa13.78□□□□□ -0.2
CSDE1-215ENST00000533818 CYP2C8P10632 490 aa13.78□□□□□ -0.2
CSDE1-215ENST00000533818 ALYREFQ86V81 257 aaKnown RBP13.78□□□□□ -0.2
CSDE1-215ENST00000533818 ATXN2LQ8WWM7 1075 aaKnown RBP13.78□□□□□ -0.2
CSDE1-215ENST00000533818 JARID2Q92833 1246 aaPredicted RBP13.78□□□□□ -0.2
CSDE1-215ENST00000533818 UHRF1Q96T88 793 aaPredicted RBP13.78□□□□□ -0.2
CSDE1-215ENST00000533818 PARK7Q99497 189 aaKnown RBP13.78□□□□□ -0.2
CSDE1-215ENST00000533818 TDRD3Q9H7E2 651 aaKnown RBP13.78□□□□□ -0.2
CSDE1-215ENST00000533818 CHPF2Q9P2E5 772 aa13.78□□□□□ -0.2
CSDE1-215ENST00000533818 PFASO15067 1338 aa13.78□□□□□ -0.2
CSDE1-215ENST00000533818 TNNI2P48788 182 aa13.77□□□□□ -0.21
CSDE1-215ENST00000533818 PPATQ06203 517 aa13.77□□□□□ -0.21
CSDE1-215ENST00000533818 ASB2Q96Q27 587 aa13.77□□□□□ -0.21
CSDE1-215ENST00000533818 HMX1Q9NP08 348 aaPredicted RBP13.77□□□□□ -0.21
CSDE1-215ENST00000533818 LRRC26Q2I0M4 334 aa13.76□□□□□ -0.21
CSDE1-215ENST00000533818 OGDHLQ9ULD0 1010 aa13.76□□□□□ -0.21
CSDE1-215ENST00000533818 PCCAP05165 728 aaPredicted RBP13.75□□□□□ -0.21
CSDE1-215ENST00000533818 SMAD3P84022 425 aaKnown RBP13.75□□□□□ -0.21
CSDE1-215ENST00000533818 HMGCRP04035 888 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 KCNJ4P48050 445 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 FKBP1AP62942 108 aaKnown RBP13.74□□□□□ -0.21
CSDE1-215ENST00000533818 MOGSQ13724 837 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 SHHQ15465 462 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 COA7Q96BR5 231 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 ANKRD2Q9GZV1 360 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 KCNH4Q9UQ05 1017 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 NCOR1O75376 2440 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 ECM29Q5VYK3 1845 aa13.74□□□□□ -0.21
CSDE1-215ENST00000533818 COL6A1P12109 1028 aa13.73□□□□□ -0.21
CSDE1-215ENST00000533818 CTSWP56202 376 aa13.73□□□□□ -0.21
CSDE1-215ENST00000533818 NFE2L2Q16236 605 aa13.73□□□□□ -0.21
CSDE1-215ENST00000533818 GPAT2Q6NUI2 795 aa13.73□□□□□ -0.21
CSDE1-215ENST00000533818 RIC3Q7Z5B4 369 aa13.73□□□□□ -0.21
CSDE1-215ENST00000533818 DZIP1LQ8IYY4 767 aaKnown RBP13.73□□□□□ -0.21
CSDE1-215ENST00000533818 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
CSDE1-215ENST00000533818 JAG2Q9Y219 1238 aa13.73□□□□□ -0.21
CSDE1-215ENST00000533818 CACNA1AO00555 2505 aa13.72□□□□□ -0.21
CSDE1-215ENST00000533818 MRPS5P82675 430 aaKnown RBP13.72□□□□□ -0.21
CSDE1-215ENST00000533818 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
CSDE1-215ENST00000533818 PPM1EQ8WY54 764 aa13.72□□□□□ -0.21
CSDE1-215ENST00000533818 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
CSDE1-215ENST00000533818 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
CSDE1-215ENST00000533818 GREM2Q9H772 168 aa13.72□□□□□ -0.21
CSDE1-215ENST00000533818 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
CSDE1-215ENST00000533818 SERPINA10Q9UK55 444 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms