RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 FLIIQ13045 1269 aa11.78□□□□□ -0.52
PACS1-214ENST00000533811 VGLL4Q14135 290 aa11.78□□□□□ -0.52
PACS1-214ENST00000533811 TWISTNBQ3B726 338 aaPredicted RBP11.78□□□□□ -0.52
PACS1-214ENST00000533811 MFSD14BQ5SR56 506 aa11.78□□□□□ -0.52
PACS1-214ENST00000533811 CHRDL2Q6WN34 429 aa11.78□□□□□ -0.52
PACS1-214ENST00000533811 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
PACS1-214ENST00000533811 C15orf52Q6ZUT6 534 aaKnown RBP11.78□□□□□ -0.52
PACS1-214ENST00000533811 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
PACS1-214ENST00000533811 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
PACS1-214ENST00000533811 TMEM39BQ9GZU3 492 aa11.78□□□□□ -0.52
PACS1-214ENST00000533811 CNNM1Q9NRU3 951 aa11.78□□□□□ -0.52
PACS1-214ENST00000533811 TNNI2P48788 182 aa11.77□□□□□ -0.53
PACS1-214ENST00000533811 DPF3Q92784 378 aa11.77□□□□□ -0.53
PACS1-214ENST00000533811 CACNA1FO60840 1977 aa11.77□□□□□ -0.53
PACS1-214ENST00000533811 ZEB1P37275 1124 aaPredicted RBP11.76□□□□□ -0.53
PACS1-214ENST00000533811 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
PACS1-214ENST00000533811 DZIP1LQ8IYY4 767 aaKnown RBP11.76□□□□□ -0.53
PACS1-214ENST00000533811 LINS1Q8NG48 757 aa11.76□□□□□ -0.53
PACS1-214ENST00000533811 AK9Q5TCS8 1911 aa11.76□□□□□ -0.53
PACS1-214ENST00000533811 CRKP46108 304 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 GYG1P46976 350 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 LACTBP83111 547 aaPredicted RBP11.75□□□□□ -0.53
PACS1-214ENST00000533811 FOXO4P98177 505 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 CHAF1AQ13111 956 aaPredicted RBP11.75□□□□□ -0.53
PACS1-214ENST00000533811 MTFR1Q15390 333 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 CCDC57Q2TAC2 916 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 LMBR1LQ6UX01 489 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.75□□□□□ -0.53
PACS1-214ENST00000533811 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 SERPINA10Q9UK55 444 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
PACS1-214ENST00000533811 BTBD19C9JJ37 291 aa11.74□□□□□ -0.53
PACS1-214ENST00000533811 F6X3S4 739 aa11.74□□□□□ -0.53
PACS1-214ENST00000533811 TLR2O60603 784 aa11.74□□□□□ -0.53
PACS1-214ENST00000533811 CETPP11597 493 aa11.74□□□□□ -0.53
PACS1-214ENST00000533811 HIBADHP31937 336 aaKnown RBP11.74□□□□□ -0.53
PACS1-214ENST00000533811 CACNB3P54284 484 aa11.74□□□□□ -0.53
PACS1-214ENST00000533811 WRNIP1Q96S55 665 aa11.74□□□□□ -0.53
PACS1-214ENST00000533811 IQSEC3Q9UPP2 1182 aaPredicted RBP11.74□□□□□ -0.53
PACS1-214ENST00000533811 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 FRAT2O75474 233 aaPredicted RBP11.73□□□□□ -0.53
PACS1-214ENST00000533811 SNAPC2Q13487 334 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 EPHA10Q5JZY3 1008 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 VPS37DQ86XT2 251 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 ERO1BQ86YB8 467 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 TDRD7Q8NHU6 1098 aaKnown RBP11.73□□□□□ -0.53
PACS1-214ENST00000533811 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
PACS1-214ENST00000533811 SHISA4Q96DD7 197 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 PRKRIP1Q9H875 184 aaPredicted RBP11.73□□□□□ -0.53
PACS1-214ENST00000533811 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 RBM27Q9P2N5 1060 aaKnown RBP11.73□□□□□ -0.53
PACS1-214ENST00000533811 BIN2Q9UBW5 565 aaPredicted RBP11.73□□□□□ -0.53
PACS1-214ENST00000533811 CPA4Q9UI42 421 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 SNCAIPQ9Y6H5 919 aa11.73□□□□□ -0.53
PACS1-214ENST00000533811 IRF6O14896 467 aa11.72□□□□□ -0.53
PACS1-214ENST00000533811 PSMC4P43686 418 aa11.72□□□□□ -0.53
PACS1-214ENST00000533811 UBE4AQ14139 1066 aa11.72□□□□□ -0.53
PACS1-214ENST00000533811 GRIK5Q16478 980 aa11.72□□□□□ -0.53
PACS1-214ENST00000533811 RAET1EQ8TD07 263 aa11.72□□□□□ -0.53
PACS1-214ENST00000533811 FAM84BQ96KN1 310 aaPredicted RBP11.72□□□□□ -0.53
PACS1-214ENST00000533811 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
PACS1-214ENST00000533811 GNRH1P01148 92 aa11.71□□□□□ -0.53
PACS1-214ENST00000533811 PRMT2P55345 433 aa11.71□□□□□ -0.53
PACS1-214ENST00000533811 PPIL2Q13356 520 aa11.71□□□□□ -0.53
PACS1-214ENST00000533811 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.71□□□□□ -0.53
PACS1-214ENST00000533811 TEKT1Q969V4 418 aa11.71□□□□□ -0.53
PACS1-214ENST00000533811 HTATIP2Q9BUP3 242 aa11.71□□□□□ -0.53
PACS1-214ENST00000533811 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.53
PACS1-214ENST00000533811 C9orf78Q9NZ63 289 aaPredicted RBP11.71□□□□□ -0.53
PACS1-214ENST00000533811 SRRDQ9UH36 339 aa11.71□□□□□ -0.53
PACS1-214ENST00000533811 MGAMO43451 1857 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 MYPNQ86TC9 1320 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 GRM8O00222 908 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 CCL5P13501 91 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 OSBPP22059 807 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 HOXD10P28358 340 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 CTGFP29279 349 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 GRK4P32298 578 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 DCAF15Q66K64 600 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 MIGA2Q7L4E1 593 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 WWC1Q8IX03 1113 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 SLC17A8Q8NDX2 589 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 TRIM47Q96LD4 638 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 RNF208Q9H0X6 261 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 ZCCHC17Q9NP64 241 aaKnown RBP11.7□□□□□ -0.54
PACS1-214ENST00000533811 RIPOR2Q9Y4F9 1068 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 MYH13Q9UKX3 1938 aa11.7□□□□□ -0.54
PACS1-214ENST00000533811 FANCIQ9NVI1 1328 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 PDHXO00330 501 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 DLL1O00548 723 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 INPP5BP32019 993 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 UBXN2AP68543 259 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 SLC4A10Q6U841 1118 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 C17orf99Q6UX52 265 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 HOOK2Q96ED9 719 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 ZNF341Q9BYN7 854 aa11.69□□□□□ -0.54
PACS1-214ENST00000533811 SALL2Q9Y467 1007 aaPredicted RBP11.69□□□□□ -0.54
PACS1-214ENST00000533811 NR2E3Q9Y5X4 410 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms