RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ARHGEF6Q15052 776 aa15.83■□□□□ 0.12
SVIP-205ENST00000533774 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
SVIP-205ENST00000533774 C15orf52Q6ZUT6 534 aaKnown RBP15.83■□□□□ 0.12
SVIP-205ENST00000533774 ZNF70Q9UC06 446 aaPredicted RBP15.83■□□□□ 0.12
SVIP-205ENST00000533774 DOCK3Q8IZD9 2030 aa15.82■□□□□ 0.12
SVIP-205ENST00000533774 TLR2O60603 784 aa15.82■□□□□ 0.12
SVIP-205ENST00000533774 DDX58O95786 925 aaKnown RBP15.82■□□□□ 0.12
SVIP-205ENST00000533774 CSF1RP07333 972 aa15.82■□□□□ 0.12
SVIP-205ENST00000533774 KCNJ4P48050 445 aa15.82■□□□□ 0.12
SVIP-205ENST00000533774 GTF2A2P52657 109 aa15.82■□□□□ 0.12
SVIP-205ENST00000533774 TSPYL6Q8N831 410 aa15.82■□□□□ 0.12
SVIP-205ENST00000533774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.12
SVIP-205ENST00000533774 PLA2G12BQ9BX93 195 aa15.82■□□□□ 0.12
SVIP-205ENST00000533774 TMEM39BQ9GZU3 492 aa15.82■□□□□ 0.12
SVIP-205ENST00000533774 TDRD3Q9H7E2 651 aaKnown RBP15.82■□□□□ 0.12
SVIP-205ENST00000533774 BTBD19C9JJ37 291 aa15.81■□□□□ 0.12
SVIP-205ENST00000533774 RBM5P52756 815 aaKnown RBP eCLIP15.81■□□□□ 0.12
SVIP-205ENST00000533774 FKBP1AP62942 108 aaKnown RBP15.81■□□□□ 0.12
SVIP-205ENST00000533774 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
SVIP-205ENST00000533774 G2E3Q7L622 706 aa15.81■□□□□ 0.12
SVIP-205ENST00000533774 LRCH3Q96II8 777 aa15.81■□□□□ 0.12
SVIP-205ENST00000533774 MPHOSPH8Q99549 860 aa15.81■□□□□ 0.12
SVIP-205ENST00000533774 ADAMTS8Q9UP79 889 aa15.81■□□□□ 0.12
SVIP-205ENST00000533774 ZBTB7BO15156 539 aaPredicted RBP15.8■□□□□ 0.12
SVIP-205ENST00000533774 IFT57Q9NWB7 429 aa15.8■□□□□ 0.12
SVIP-205ENST00000533774 SNCAIPQ9Y6H5 919 aa15.8■□□□□ 0.12
SVIP-205ENST00000533774 TCP10L2B9ZVM9 353 aa15.79■□□□□ 0.12
SVIP-205ENST00000533774 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
SVIP-205ENST00000533774 TRIM47Q96LD4 638 aa15.79■□□□□ 0.12
SVIP-205ENST00000533774 SPDYE5A6NIY4 337 aa15.78■□□□□ 0.12
SVIP-205ENST00000533774 GJA8P48165 433 aa15.78■□□□□ 0.12
SVIP-205ENST00000533774 GCKRQ14397 625 aa15.78■□□□□ 0.12
SVIP-205ENST00000533774 RALBP1Q15311 655 aa15.78■□□□□ 0.12
SVIP-205ENST00000533774 GRIK5Q16478 980 aa15.78■□□□□ 0.12
SVIP-205ENST00000533774 C17orf99Q6UX52 265 aa15.78■□□□□ 0.12
SVIP-205ENST00000533774 SRRDQ9UH36 339 aa15.78■□□□□ 0.12
SVIP-205ENST00000533774 CACNA1FO60840 1977 aa15.78■□□□□ 0.12
SVIP-205ENST00000533774 FAM205AQ6ZU69 1335 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 AK9Q5TCS8 1911 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 IRF6O14896 467 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 CCL5P13501 91 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 OSBPP22059 807 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 GNAI1P63096 354 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 NEXNQ0ZGT2 675 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 TNFAIP1Q13829 316 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 KIF22Q14807 665 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 ZNF804AQ7Z570 1209 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 DZIP1LQ8IYY4 767 aaKnown RBP15.77■□□□□ 0.12
SVIP-205ENST00000533774 CPA4Q9UI42 421 aa15.77■□□□□ 0.12
SVIP-205ENST00000533774 ADGRA2Q96PE1 1338 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 GNRH1P01148 92 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 GJB1P08034 283 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 CETPP11597 493 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 GRK4P32298 578 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 PSMC4P43686 418 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 PRMT2P55345 433 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 ZKSCAN4Q969J2 545 aaPredicted RBP15.76■□□□□ 0.11
SVIP-205ENST00000533774 TTF2Q9UNY4 1162 aaKnown RBP15.76■□□□□ 0.11
SVIP-205ENST00000533774 RIPOR2Q9Y4F9 1068 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 CSADQ9Y600 493 aa15.76■□□□□ 0.11
SVIP-205ENST00000533774 CACNB3P54284 484 aa15.75■□□□□ 0.11
SVIP-205ENST00000533774 FOXO4P98177 505 aa15.75■□□□□ 0.11
SVIP-205ENST00000533774 MFSD14BQ5SR56 506 aa15.75■□□□□ 0.11
SVIP-205ENST00000533774 HTATIP2Q9BUP3 242 aa15.75■□□□□ 0.11
SVIP-205ENST00000533774 ZCCHC17Q9NP64 241 aaKnown RBP15.75■□□□□ 0.11
SVIP-205ENST00000533774 SERPINA10Q9UK55 444 aa15.75■□□□□ 0.11
SVIP-205ENST00000533774 UNC80Q8N2C7 3258 aa15.75■□□□□ 0.11
SVIP-205ENST00000533774 ANKRD18BA2A2Z9 1011 aa15.74■□□□□ 0.11
SVIP-205ENST00000533774 APAF1O14727 1248 aa15.74■□□□□ 0.11
SVIP-205ENST00000533774 WDR43Q15061 677 aaKnown RBP eCLIP15.74■□□□□ 0.11
SVIP-205ENST00000533774 ERO1BQ86YB8 467 aa15.74■□□□□ 0.11
SVIP-205ENST00000533774 TDRD7Q8NHU6 1098 aaKnown RBP15.74■□□□□ 0.11
SVIP-205ENST00000533774 NKX2-3Q8TAU0 364 aa15.74■□□□□ 0.11
SVIP-205ENST00000533774 ZNF594Q96JF6 807 aaPredicted RBP15.74■□□□□ 0.11
SVIP-205ENST00000533774 RNF208Q9H0X6 261 aa15.74■□□□□ 0.11
SVIP-205ENST00000533774 STAP2Q9UGK3 403 aa15.74■□□□□ 0.11
SVIP-205ENST00000533774 MYBBP1AQ9BQG0 1328 aaKnown RBP15.73■□□□□ 0.11
SVIP-205ENST00000533774 SPDYE4A6NLX3 237 aa15.73■□□□□ 0.11
SVIP-205ENST00000533774 PLIN1O60240 522 aa15.73■□□□□ 0.11
SVIP-205ENST00000533774 FARP2O94887 1054 aaPredicted RBP15.73■□□□□ 0.11
SVIP-205ENST00000533774 CRKP46108 304 aa15.73■□□□□ 0.11
SVIP-205ENST00000533774 MNX1P50219 401 aaPredicted RBP15.73■□□□□ 0.11
SVIP-205ENST00000533774 SNAPC2Q13487 334 aa15.73■□□□□ 0.11
SVIP-205ENST00000533774 RAET1EQ8TD07 263 aa15.73■□□□□ 0.11
SVIP-205ENST00000533774 U2AF1L4Q8WU68 220 aaKnown RBP15.73■□□□□ 0.11
SVIP-205ENST00000533774 WRNIP1Q96S55 665 aa15.73■□□□□ 0.11
SVIP-205ENST00000533774 UNC93B1Q9H1C4 597 aa15.73■□□□□ 0.11
SVIP-205ENST00000533774 NR2E3Q9Y5X4 410 aa15.73■□□□□ 0.11
SVIP-205ENST00000533774 PTPRFP10586 1907 aa15.72■□□□□ 0.11
SVIP-205ENST00000533774 MYPNQ86TC9 1320 aa15.72■□□□□ 0.11
SVIP-205ENST00000533774 A0A1W2PPC1 479 aa15.72■□□□□ 0.11
SVIP-205ENST00000533774 GYG1P46976 350 aa15.72■□□□□ 0.11
SVIP-205ENST00000533774 PPIL2Q13356 520 aa15.72■□□□□ 0.11
SVIP-205ENST00000533774 MOGSQ13724 837 aa15.72■□□□□ 0.11
SVIP-205ENST00000533774 GABRQQ9UN88 632 aa15.72■□□□□ 0.11
SVIP-205ENST00000533774 WDHD1O75717 1129 aaPredicted RBP15.71■□□□□ 0.11
SVIP-205ENST00000533774 FMNL1O95466 1100 aaPredicted RBP15.71■□□□□ 0.11
SVIP-205ENST00000533774 PRKCZQ05513 592 aa15.71■□□□□ 0.11
SVIP-205ENST00000533774 EPHA10Q5JZY3 1008 aa15.71■□□□□ 0.11
SVIP-205ENST00000533774 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms