RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 WDR66Q8TBY9 1149 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 NGLY1Q96IV0 654 aa7.91□□□□□ -1.14
CTNND1-236ENST00000533667 DDX21Q9NR30 783 aaKnown RBP eCLIP7.91□□□□□ -1.144e-6■□□□□ 11.2
CTNND1-236ENST00000533667 CFAP43Q8NDM7 1665 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 CAPN2P17655 700 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 CCDC97Q96F63 343 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-236ENST00000533667 SYNCQ9H7C4 482 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 SPDYE3A6NKU9 549 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 ADAMTS2O95450 1211 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 SEPT14Q6ZU15 432 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 CCDC121Q6ZUS5 278 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 CERS3Q8IU89 383 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 ATRIPQ8WXE1 791 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 NAP1L3Q99457 506 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-236ENST00000533667 BAG1Q99933 345 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-236ENST00000533667 IMPACTQ9P2X3 320 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 TTF2Q9UNY4 1162 aaKnown RBP7.9□□□□□ -1.14
CTNND1-236ENST00000533667 STK24Q9Y6E0 443 aa7.9□□□□□ -1.14
CTNND1-236ENST00000533667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.9□□□□□ -1.14
CTNND1-236ENST00000533667 PHACTR2O75167 634 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 ZNF445P59923 1031 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 GABPB1Q06547 395 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-236ENST00000533667 MSL1Q68DK7 614 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 RSPH14Q9UHP6 348 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 PA2G4Q9UQ80 394 aaKnown RBP7.9□□□□□ -1.15
CTNND1-236ENST00000533667 CTTNBP2Q8WZ74 1663 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 FAM13AO94988 1023 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 ZNF569Q5MCW4 686 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 AP1ARQ63HQ0 302 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 TSPYL6Q8N831 410 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 GLT8D2Q9H1C3 349 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 MTUS1Q9ULD2 1270 aa7.9□□□□□ -1.15
CTNND1-236ENST00000533667 ZBTB12Q9Y330 459 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-236ENST00000533667 PABPN1LA6NDY0 278 aaKnown RBP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 PPFIA3O75145 1194 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 DEXIO95424 95 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 TFCP2Q12800 502 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 WDR78Q5VTH9 848 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 JARID2Q92833 1246 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 CLSTN2Q9H4D0 955 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 EFCC1Q9HA90 598 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 A0A1W2PP64 1363 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 A0A1B0GUA9 196 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 PER1O15534 1290 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 IL2RBP14784 551 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 ATP2A2P16615 1042 aaKnown RBP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 CCDC6Q16204 474 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 SYT10Q6XYQ8 523 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 CCDC65Q8IXS2 484 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 RNF168Q8IYW5 571 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 CEP120Q8N960 986 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 KIAA1524Q8TCG1 905 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 NIP7Q9Y221 180 aaKnown RBP eCLIP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 CROCCP2Q86T23 111 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 GUCA1BQ9UMX6 200 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 COMMD10Q9Y6G5 202 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 IRS4O14654 1257 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 ATP5DP30049 168 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 ATP6V1AP38606 617 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 GRIPAP1Q4V328 841 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 TPTE2Q6XPS3 522 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 DZIP3Q86Y13 1208 aaKnown RBP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 CCDC26Q8TAB7 109 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 DRC1Q96MC2 740 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 TRERF1Q96PN7 1200 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 SMC6Q96SB8 1091 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 NUP58Q9BVL2 599 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 RNF216Q9NWF9 866 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-236ENST00000533667 DENND2AQ9ULE3 1009 aa7.89□□□□□ -1.15
CTNND1-236ENST00000533667 RNMTO43148 476 aaKnown RBP7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CUTAO60888 179 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CEBPAP49715 358 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-236ENST00000533667 SLC39A6Q13433 755 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 SV2BQ7L1I2 683 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 OTUD6BQ8N6M0 293 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 MLKLQ8NB16 471 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 FAM76AQ8TAV0 307 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 IP6K1Q92551 441 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 IQCDQ96DY2 449 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 KDM2BQ8NHM5 1336 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 PCDH11XQ9BZA7 1347 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 PCDH11YQ9BZA8 1340 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CHRNA2Q15822 529 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CFAP58Q5T655 872 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 ANO1Q5XXA6 986 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 MAGEB6Q8N7X4 407 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 EYA1Q99502 592 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 MCM9Q9NXL9 1143 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CEP83Q9Y592 693 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 EDC4Q6P2E9 1401 aaKnown RBP7.88□□□□□ -1.15
CTNND1-236ENST00000533667 ZNF608Q9ULD9 1512 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-236ENST00000533667 EYA2O00167 538 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CALCOCO2Q13137 446 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 TTLL12Q14166 644 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-236ENST00000533667 HSP90AA4PQ58FG1 418 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 TTC6Q86TZ1 520 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 WDR7Q9Y4E6 1490 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CLUL1Q15846 466 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CCDC122Q5T0U0 273 aa7.88□□□□□ -1.15
CTNND1-236ENST00000533667 CNNM4Q6P4Q7 775 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms