RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SALL1Q9NSC2 1324 aa21.2■□□□□ 0.98
NXF1-216ENST00000533499 ZNF646O15015 1829 aaPredicted RBP21.2■□□□□ 0.98
NXF1-216ENST00000533499 TBC1D10BQ4KMP7 808 aaPredicted RBP21.19■□□□□ 0.98
NXF1-216ENST00000533499 GMLQ99445 158 aa21.19■□□□□ 0.98
NXF1-216ENST00000533499 GPBP1L1Q9HC44 474 aaPredicted RBP21.19■□□□□ 0.98
NXF1-216ENST00000533499 NMRK2Q9NPI5 230 aa21.19■□□□□ 0.98
NXF1-216ENST00000533499 MYO5AQ9Y4I1 1855 aaKnown RBP21.18■□□□□ 0.98
NXF1-216ENST00000533499 IQCA1LA6NCM1 817 aa21.18■□□□□ 0.98
NXF1-216ENST00000533499 MAP3K12Q12852 859 aa21.18■□□□□ 0.98
NXF1-216ENST00000533499 DIXDC1Q155Q3 683 aa21.18■□□□□ 0.98
NXF1-216ENST00000533499 EAPPQ56P03 285 aaPredicted RBP21.18■□□□□ 0.98
NXF1-216ENST00000533499 SAMD7Q7Z3H4 446 aa21.18■□□□□ 0.98
NXF1-216ENST00000533499 RILPL2Q969X0 211 aa21.18■□□□□ 0.98
NXF1-216ENST00000533499 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
NXF1-216ENST00000533499 MAST3O60307 1309 aa21.18■□□□□ 0.98
NXF1-216ENST00000533499 AOX1Q06278 1338 aa21.18■□□□□ 0.98
NXF1-216ENST00000533499 MECOMQ03112 1051 aa21.17■□□□□ 0.98
NXF1-216ENST00000533499 FSD1Q9BTV5 496 aa21.17■□□□□ 0.98
NXF1-216ENST00000533499 SUGT1Q9Y2Z0 365 aa21.17■□□□□ 0.98
NXF1-216ENST00000533499 ZBTB22O15209 634 aa21.16■□□□□ 0.98
NXF1-216ENST00000533499 VEGFAP15692 232 aaPredicted RBP21.16■□□□□ 0.98
NXF1-216ENST00000533499 EPHX2P34913 555 aa21.16■□□□□ 0.98
NXF1-216ENST00000533499 DLGAP5Q15398 846 aa21.16■□□□□ 0.98
NXF1-216ENST00000533499 CFAP100Q494V2 611 aa21.16■□□□□ 0.98
NXF1-216ENST00000533499 NAA16Q6N069 864 aaPredicted RBP21.16■□□□□ 0.98
NXF1-216ENST00000533499 MAGEB6Q8N7X4 407 aa21.16■□□□□ 0.98
NXF1-216ENST00000533499 TEKT1Q969V4 418 aa21.16■□□□□ 0.98
NXF1-216ENST00000533499 OSBPL3Q9H4L5 887 aa21.16■□□□□ 0.98
NXF1-216ENST00000533499 MYOZ2Q9NPC6 264 aa21.16■□□□□ 0.98
NXF1-216ENST00000533499 CRKP46108 304 aa21.15■□□□□ 0.98
NXF1-216ENST00000533499 GSTO1P78417 241 aa21.15■□□□□ 0.98
NXF1-216ENST00000533499 KIF4BQ2VIQ3 1234 aa21.15■□□□□ 0.98
NXF1-216ENST00000533499 TTC22Q5TAA0 569 aa21.15■□□□□ 0.98
NXF1-216ENST00000533499 SLF2Q8IX21 1173 aa21.15■□□□□ 0.98
NXF1-216ENST00000533499 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.981e-6■■■□□ 15.4
NXF1-216ENST00000533499 ADARB2Q9NS39 739 aaKnown RBP21.15■□□□□ 0.98
NXF1-216ENST00000533499 CLEC11AQ9Y240 323 aa21.15■□□□□ 0.98
NXF1-216ENST00000533499 WDR90Q96KV7 1748 aa21.15■□□□□ 0.98
NXF1-216ENST00000533499 CYP7A1P22680 504 aa21.14■□□□□ 0.97
NXF1-216ENST00000533499 SLC9C2Q5TAH2 1124 aa21.14■□□□□ 0.97
NXF1-216ENST00000533499 CNTROBQ8N137 903 aa21.14■□□□□ 0.97
NXF1-216ENST00000533499 TRPM4Q8TD43 1214 aa21.14■□□□□ 0.97
NXF1-216ENST00000533499 TAF1DQ9H5J8 278 aaPredicted RBP21.14■□□□□ 0.97
NXF1-216ENST00000533499 PCDHAC2Q9Y5I4 1007 aa21.14■□□□□ 0.97
NXF1-216ENST00000533499 POTECB2RU33 542 aa21.13■□□□□ 0.97
NXF1-216ENST00000533499 EGFRP00533 1210 aa21.13■□□□□ 0.97
NXF1-216ENST00000533499 LDHCP07864 332 aa21.13■□□□□ 0.97
NXF1-216ENST00000533499 ZNF280AP59817 542 aaPredicted RBP21.13■□□□□ 0.97
NXF1-216ENST00000533499 KBTBD3Q8NAB2 608 aa21.13■□□□□ 0.97
NXF1-216ENST00000533499 NSUN4Q96CB9 384 aaKnown RBP21.13■□□□□ 0.97
NXF1-216ENST00000533499 EVI5LQ96CN4 794 aa21.13■□□□□ 0.97
NXF1-216ENST00000533499 NOL10Q9BSC4 688 aaKnown RBP21.13■□□□□ 0.97
NXF1-216ENST00000533499 MYH2Q9UKX2 1941 aa21.13■□□□□ 0.97
NXF1-216ENST00000533499 SCN4AP35499 1836 aa21.13■□□□□ 0.97
NXF1-216ENST00000533499 ADAMTSL1Q8N6G6 1762 aa21.13■□□□□ 0.97
NXF1-216ENST00000533499 ZSCAN25Q6NSZ9 544 aa21.12■□□□□ 0.97
NXF1-216ENST00000533499 SERPINA10Q9UK55 444 aa21.12■□□□□ 0.97
NXF1-216ENST00000533499 PDE6AP16499 860 aa21.11■□□□□ 0.97
NXF1-216ENST00000533499 DAGLAQ9Y4D2 1042 aa21.11■□□□□ 0.97
NXF1-216ENST00000533499 DOCK2Q92608 1830 aa21.11■□□□□ 0.97
NXF1-216ENST00000533499 ZNF532Q9HCE3 1301 aa21.1■□□□□ 0.97
NXF1-216ENST00000533499 AK9Q5TCS8 1911 aa21.1■□□□□ 0.97
NXF1-216ENST00000533499 GSPT1P15170 499 aaKnown RBP21.1■□□□□ 0.97
NXF1-216ENST00000533499 HDLBPQ00341 1268 aaKnown RBP21.1■□□□□ 0.97
NXF1-216ENST00000533499 LRRFIP1Q32MZ4 808 aaKnown RBP21.1■□□□□ 0.97
NXF1-216ENST00000533499 NBPF9Q3BBW0 867 aa21.1■□□□□ 0.97
NXF1-216ENST00000533499 SLFNL1Q499Z3 407 aa21.1■□□□□ 0.97
NXF1-216ENST00000533499 HHIPL2Q6UWX4 724 aa21.1■□□□□ 0.97
NXF1-216ENST00000533499 ZNF784Q8NCA9 323 aaPredicted RBP21.1■□□□□ 0.97
NXF1-216ENST00000533499 PRMT6Q96LA8 375 aaPredicted RBP21.1■□□□□ 0.97
NXF1-216ENST00000533499 MAST2Q6P0Q8 1798 aa21.1■□□□□ 0.97
NXF1-216ENST00000533499 MROH7-TTC4A0A0A0MT08 1334 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 CLRN2A0PK11 232 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 MYO1BO43795 1136 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 CHGBP05060 677 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 SDSP20132 328 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 BTDP43251 543 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 MMP14P50281 582 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 USP50Q70EL3 339 aaPredicted RBP21.09■□□□□ 0.97
NXF1-216ENST00000533499 PNMA8AQ86V59 439 aaPredicted RBP21.09■□□□□ 0.97
NXF1-216ENST00000533499 MIGA1Q8NAN2 632 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 ZNF384Q8TF68 577 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 TDRD3Q9H7E2 651 aaKnown RBP21.09■□□□□ 0.97
NXF1-216ENST00000533499 VEZTQ9HBM0 779 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 MYH7P12883 1935 aa21.09■□□□□ 0.97
NXF1-216ENST00000533499 SPDYE2BA6NHP3 402 aa21.08■□□□□ 0.97
NXF1-216ENST00000533499 WNT10BO00744 389 aa21.08■□□□□ 0.97
NXF1-216ENST00000533499 RNF113AO15541 343 aaKnown RBP21.08■□□□□ 0.97
NXF1-216ENST00000533499 SPDYE6P0CI01 402 aa21.08■□□□□ 0.97
NXF1-216ENST00000533499 ADD2P35612 726 aa21.08■□□□□ 0.97
NXF1-216ENST00000533499 HIRAP54198 1017 aaPredicted RBP21.08■□□□□ 0.97
NXF1-216ENST00000533499 ADGRA1Q86SQ6 560 aa21.08■□□□□ 0.97
NXF1-216ENST00000533499 ZDHHC15Q96MV8 337 aa21.08■□□□□ 0.97
NXF1-216ENST00000533499 AATFQ9NY61 560 aaKnown RBP eCLIP21.08■□□□□ 0.97
NXF1-216ENST00000533499 ASTN2O75129 1339 aaPredicted RBP21.07■□□□□ 0.96
NXF1-216ENST00000533499 BAG3O95817 575 aa21.07■□□□□ 0.96
NXF1-216ENST00000533499 MRIQ9BWK5 157 aa21.07■□□□□ 0.96
NXF1-216ENST00000533499 USP40Q9NVE5 1235 aa21.07■□□□□ 0.96
NXF1-216ENST00000533499 TMOD2Q9NZR1 351 aa21.07■□□□□ 0.96
NXF1-216ENST00000533499 ZFYP08048 801 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms