RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 GRIK5Q16478 980 aa28.71■■■□□ 2.19
PKP3-210ENST00000533249 CAVIN4Q5BKX8 364 aa28.71■■■□□ 2.19
PKP3-210ENST00000533249 DIEXFQ68CQ4 756 aaKnown RBP28.71■■■□□ 2.19
PKP3-210ENST00000533249 FBXO46Q6PJ61 603 aaPredicted RBP28.71■■■□□ 2.19
PKP3-210ENST00000533249 ANKRD13AQ8IZ07 590 aa28.71■■■□□ 2.19
PKP3-210ENST00000533249 GJA5P36382 358 aa28.7■■■□□ 2.18
PKP3-210ENST00000533249 TNRC18O15417 2968 aaPredicted RBP28.7■■■□□ 2.18
PKP3-210ENST00000533249 PDE8BO95263 885 aa28.69■■■□□ 2.18
PKP3-210ENST00000533249 CDAN1Q8IWY9 1227 aa28.69■■■□□ 2.18
PKP3-210ENST00000533249 VGLL2Q8N8G2 317 aa28.69■■■□□ 2.18
PKP3-210ENST00000533249 USP44Q9H0E7 712 aa28.69■■■□□ 2.18
PKP3-210ENST00000533249 OTOFQ9HC10 1997 aa28.69■■■□□ 2.18
PKP3-210ENST00000533249 PDE4DIPQ5VU43 2346 aa28.69■■■□□ 2.18
PKP3-210ENST00000533249 LAMB1P07942 1786 aa28.68■■■□□ 2.18
PKP3-210ENST00000533249 TMEM39BQ9GZU3 492 aa28.68■■■□□ 2.18
PKP3-210ENST00000533249 ELP3Q9H9T3 547 aa28.68■■■□□ 2.18
PKP3-210ENST00000533249 BCAMP50895 628 aa28.67■■■□□ 2.18
PKP3-210ENST00000533249 TBC1D22AQ8WUA7 517 aa28.67■■■□□ 2.18
PKP3-210ENST00000533249 TEPSINQ96N21 525 aa28.67■■■□□ 2.18
PKP3-210ENST00000533249 TNNI2P48788 182 aa28.66■■■□□ 2.18
PKP3-210ENST00000533249 SLFN5Q08AF3 891 aa28.66■■■□□ 2.18
PKP3-210ENST00000533249 OPTNQ96CV9 577 aa28.65■■■□□ 2.18
PKP3-210ENST00000533249 TRIM17Q9Y577 477 aa28.65■■■□□ 2.18
PKP3-210ENST00000533249 OTUD7BQ6GQQ9 843 aa28.64■■■□□ 2.18
PKP3-210ENST00000533249 TEKT1Q969V4 418 aa28.64■■■□□ 2.18
PKP3-210ENST00000533249 SLC34A2O95436 690 aa28.63■■■□□ 2.17
PKP3-210ENST00000533249 IFIT1P09914 478 aaKnown RBP28.63■■■□□ 2.17
PKP3-210ENST00000533249 CACNB3P54284 484 aa28.63■■■□□ 2.17
PKP3-210ENST00000533249 HDLBPQ00341 1268 aaKnown RBP28.63■■■□□ 2.17
PKP3-210ENST00000533249 CRHR2Q13324 411 aa28.63■■■□□ 2.17
PKP3-210ENST00000533249 PUM3Q15397 648 aaKnown RBP28.63■■■□□ 2.17
PKP3-210ENST00000533249 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.62■■■□□ 2.17
PKP3-210ENST00000533249 CNKSR2Q8WXI2 1034 aa28.62■■■□□ 2.17
PKP3-210ENST00000533249 CDCA7LQ96GN5 454 aa28.62■■■□□ 2.17
PKP3-210ENST00000533249 PTPN18Q99952 460 aa28.62■■■□□ 2.17
PKP3-210ENST00000533249 SMC4Q9NTJ3 1288 aa28.62■■■□□ 2.17
PKP3-210ENST00000533249 FGFR2P21802 821 aa28.61■■■□□ 2.17
PKP3-210ENST00000533249 OTOP1Q7RTM1 612 aa28.61■■■□□ 2.17
PKP3-210ENST00000533249 TESPA1A2RU30 521 aaPredicted RBP28.6■■■□□ 2.17
PKP3-210ENST00000533249 MAP3K9P80192 1104 aa28.6■■■□□ 2.17
PKP3-210ENST00000533249 VGLL4Q14135 290 aa28.6■■■□□ 2.17
PKP3-210ENST00000533249 ALDH1L2Q3SY69 923 aa28.6■■■□□ 2.17
PKP3-210ENST00000533249 TMOD2Q9NZR1 351 aa28.6■■■□□ 2.17
PKP3-210ENST00000533249 EYA2O00167 538 aa28.59■■■□□ 2.17
PKP3-210ENST00000533249 RFX5P48382 616 aaPredicted RBP28.59■■■□□ 2.17
PKP3-210ENST00000533249 CD99L2Q8TCZ2 262 aa28.59■■■□□ 2.17
PKP3-210ENST00000533249 ERO1AQ96HE7 468 aa28.59■■■□□ 2.17
PKP3-210ENST00000533249 CSADQ9Y600 493 aa28.59■■■□□ 2.17
PKP3-210ENST00000533249 SLC5A1P13866 664 aa28.58■■■□□ 2.17
PKP3-210ENST00000533249 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.58■■■□□ 2.17
PKP3-210ENST00000533249 MS4A4AQ96JQ5 239 aa28.58■■■□□ 2.17
PKP3-210ENST00000533249 ZDHHC15Q96MV8 337 aa28.58■■■□□ 2.17
PKP3-210ENST00000533249 MAST3O60307 1309 aa28.58■■■□□ 2.17
PKP3-210ENST00000533249 KIF16BQ96L93 1317 aa28.58■■■□□ 2.17
PKP3-210ENST00000533249 OTUD5Q96G74 571 aa28.57■■■□□ 2.16
PKP3-210ENST00000533249 MYH13Q9UKX3 1938 aa28.57■■■□□ 2.16
PKP3-210ENST00000533249 APOBEC3HQ6NTF7 200 aaKnown RBP28.56■■■□□ 2.16
PKP3-210ENST00000533249 BRI3BPQ8WY22 251 aa28.56■■■□□ 2.16
PKP3-210ENST00000533249 LPIN2Q92539 896 aa28.56■■■□□ 2.16
PKP3-210ENST00000533249 SUGT1Q9Y2Z0 365 aa28.56■■■□□ 2.16
PKP3-210ENST00000533249 CCL15-CCL14A0A0B4J2E2 113 aa28.55■■■□□ 2.16
PKP3-210ENST00000533249 CCL15Q16663 113 aa28.55■■■□□ 2.16
PKP3-210ENST00000533249 MRIQ9BWK5 157 aa28.55■■■□□ 2.16
PKP3-210ENST00000533249 SIL1Q9H173 461 aa28.55■■■□□ 2.16
PKP3-210ENST00000533249 UBTFL1P0CB47 393 aaPredicted RBP28.54■■■□□ 2.16
PKP3-210ENST00000533249 GTF2A2P52657 109 aa28.54■■■□□ 2.16
PKP3-210ENST00000533249 SP3Q02447 781 aa28.54■■■□□ 2.16
PKP3-210ENST00000533249 ATG9AQ7Z3C6 839 aa28.54■■■□□ 2.16
PKP3-210ENST00000533249 TAF1CQ15572 869 aaPredicted RBP28.53■■■□□ 2.16
PKP3-210ENST00000533249 HHIPL2Q6UWX4 724 aa28.53■■■□□ 2.16
PKP3-210ENST00000533249 FAM83AQ86UY5 434 aa28.53■■■□□ 2.16
PKP3-210ENST00000533249 WDR66Q8TBY9 1149 aa28.53■■■□□ 2.16
PKP3-210ENST00000533249 WRNIP1Q96S55 665 aa28.53■■■□□ 2.16
PKP3-210ENST00000533249 EFCC1Q9HA90 598 aa28.53■■■□□ 2.16
PKP3-210ENST00000533249 PTPN22Q9Y2R2 807 aa28.53■■■□□ 2.16
PKP3-210ENST00000533249 SPDYE5A6NIY4 337 aa28.51■■■□□ 2.15
PKP3-210ENST00000533249 FKBP1CQ5VVH2 108 aa28.51■■■□□ 2.15
PKP3-210ENST00000533249 NOB1Q9ULX3 412 aaKnown RBP28.51■■■□□ 2.15
PKP3-210ENST00000533249 SNCAIPQ9Y6H5 919 aa28.51■■■□□ 2.15
PKP3-210ENST00000533249 ATP2B3Q16720 1220 aa28.5■■■□□ 2.15
PKP3-210ENST00000533249 PRPF38BQ5VTL8 546 aaKnown RBP28.5■■■□□ 2.15
PKP3-210ENST00000533249 TRMT2AQ8IZ69 625 aaKnown RBP28.5■■■□□ 2.15
PKP3-210ENST00000533249 FAM43AQ8N2R8 423 aa28.5■■■□□ 2.15
PKP3-210ENST00000533249 ZKSCAN4Q969J2 545 aaPredicted RBP28.5■■■□□ 2.15
PKP3-210ENST00000533249 HOOK2Q96ED9 719 aa28.5■■■□□ 2.15
PKP3-210ENST00000533249 ZFYVE28Q9HCC9 887 aa28.5■■■□□ 2.15
PKP3-210ENST00000533249 CEP126Q9P2H0 1117 aa28.5■■■□□ 2.15
PKP3-210ENST00000533249 CAP1Q01518 475 aa28.49■■■□□ 2.15
PKP3-210ENST00000533249 ERO1BQ86YB8 467 aa28.49■■■□□ 2.15
PKP3-210ENST00000533249 DIXDC1Q155Q3 683 aa28.48■■■□□ 2.15
PKP3-210ENST00000533249 DCAF15Q66K64 600 aa28.48■■■□□ 2.15
PKP3-210ENST00000533249 LRRFIP2Q9Y608 721 aaKnown RBP28.48■■■□□ 2.15
PKP3-210ENST00000533249 CIAO1O76071 339 aa28.47■■■□□ 2.15
PKP3-210ENST00000533249 PRDX5P30044 214 aa28.47■■■□□ 2.15
PKP3-210ENST00000533249 INTS3Q68E01 1043 aaKnown RBP28.47■■■□□ 2.15
PKP3-210ENST00000533249 MIGA2Q7L4E1 593 aa28.47■■■□□ 2.15
PKP3-210ENST00000533249 API5Q9BZZ5 524 aaKnown RBP28.47■■■□□ 2.15
PKP3-210ENST00000533249 FBXO3Q9UK99 471 aa28.47■■■□□ 2.15
PKP3-210ENST00000533249 DAGLAQ9Y4D2 1042 aa28.47■■■□□ 2.15
PKP3-210ENST00000533249 RPAP1Q9BWH6 1393 aaPredicted RBP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms