RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PPP1R12BO60237 982 aaPredicted RBP29.19■■■□□ 2.26
SMPD1-209ENST00000533196 CAPN15O75808 1086 aa29.19■■■□□ 2.26
SMPD1-209ENST00000533196 BCAR3O75815 825 aa29.19■■■□□ 2.26
SMPD1-209ENST00000533196 DZIP1LQ8IYY4 767 aaKnown RBP29.19■■■□□ 2.26
SMPD1-209ENST00000533196 SIL1Q9H173 461 aa29.19■■■□□ 2.26
SMPD1-209ENST00000533196 MTX1Q13505 466 aa29.18■■■□□ 2.26
SMPD1-209ENST00000533196 RNF186Q9NXI6 227 aa29.18■■■□□ 2.26
SMPD1-209ENST00000533196 ZNF70Q9UC06 446 aaPredicted RBP29.18■■■□□ 2.26
SMPD1-209ENST00000533196 ANGEL1Q9UNK9 670 aaKnown RBP29.18■■■□□ 2.26
SMPD1-209ENST00000533196 ZBTB22O15209 634 aa29.17■■■□□ 2.26
SMPD1-209ENST00000533196 ATP2B3Q16720 1220 aa29.17■■■□□ 2.26
SMPD1-209ENST00000533196 WDR66Q8TBY9 1149 aa29.17■■■□□ 2.26
SMPD1-209ENST00000533196 FRAT1Q92837 279 aaPredicted RBP29.17■■■□□ 2.26
SMPD1-209ENST00000533196 AOX1Q06278 1338 aa29.17■■■□□ 2.26
SMPD1-209ENST00000533196 RASA3Q14644 834 aa29.16■■■□□ 2.26
SMPD1-209ENST00000533196 TEKT1Q969V4 418 aa29.16■■■□□ 2.26
SMPD1-209ENST00000533196 PRKG1Q13976 671 aa29.15■■■□□ 2.26
SMPD1-209ENST00000533196 ZKSCAN2Q63HK3 967 aa29.15■■■□□ 2.26
SMPD1-209ENST00000533196 TDRD3Q9H7E2 651 aaKnown RBP29.15■■■□□ 2.26
SMPD1-209ENST00000533196 GNL3LQ9NVN8 582 aaKnown RBP29.15■■■□□ 2.26
SMPD1-209ENST00000533196 SSC5DA1L4H1 1573 aa29.14■■■□□ 2.26
SMPD1-209ENST00000533196 TRPA1O75762 1119 aa29.14■■■□□ 2.26
SMPD1-209ENST00000533196 TNNI2P48788 182 aa29.14■■■□□ 2.26
SMPD1-209ENST00000533196 PA2G4Q9UQ80 394 aaKnown RBP29.14■■■□□ 2.26
SMPD1-209ENST00000533196 SRGAP3O43295 1099 aa29.13■■■□□ 2.25
SMPD1-209ENST00000533196 TM4SF4P48230 202 aa29.13■■■□□ 2.25
SMPD1-209ENST00000533196 GRIK5Q16478 980 aa29.13■■■□□ 2.25
SMPD1-209ENST00000533196 HHIPL2Q6UWX4 724 aa29.13■■■□□ 2.25
SMPD1-209ENST00000533196 ZBED9Q6R2W3 1325 aa29.13■■■□□ 2.25
SMPD1-209ENST00000533196 SEMA3EO15041 775 aa29.12■■■□□ 2.25
SMPD1-209ENST00000533196 GNAI2P04899 355 aa29.12■■■□□ 2.25
SMPD1-209ENST00000533196 IREB2P48200 963 aaKnown RBP29.12■■■□□ 2.25
SMPD1-209ENST00000533196 SREBF2Q12772 1141 aa29.12■■■□□ 2.25
SMPD1-209ENST00000533196 NBPF12Q5TAG4 269 aaPredicted RBP29.12■■■□□ 2.25
SMPD1-209ENST00000533196 ZDHHC15Q96MV8 337 aa29.12■■■□□ 2.25
SMPD1-209ENST00000533196 ABHD8Q96I13 439 aa29.11■■■□□ 2.25
SMPD1-209ENST00000533196 SPRYD7Q5W111 196 aa29.1■■■□□ 2.25
SMPD1-209ENST00000533196 CLUAP1Q96AJ1 413 aa29.1■■■□□ 2.25
SMPD1-209ENST00000533196 SLC10A4Q96EP9 437 aa29.1■■■□□ 2.25
SMPD1-209ENST00000533196 LAMB1P07942 1786 aa29.09■■■□□ 2.25
SMPD1-209ENST00000533196 FKBP1CQ5VVH2 108 aa29.09■■■□□ 2.25
SMPD1-209ENST00000533196 TMOD2Q9NZR1 351 aa29.09■■■□□ 2.25
SMPD1-209ENST00000533196 DENND2AQ9ULE3 1009 aa29.09■■■□□ 2.25
SMPD1-209ENST00000533196 TNNQ9UQP3 1299 aa29.09■■■□□ 2.25
SMPD1-209ENST00000533196 AKAP2Q9Y2D5 859 aa29.09■■■□□ 2.25
SMPD1-209ENST00000533196 USP2O75604 605 aaPredicted RBP29.08■■■□□ 2.25
SMPD1-209ENST00000533196 ZBTB48P10074 688 aaPredicted RBP29.08■■■□□ 2.25
SMPD1-209ENST00000533196 TEPSINQ96N21 525 aa29.08■■■□□ 2.25
SMPD1-209ENST00000533196 SALL1Q9NSC2 1324 aa29.08■■■□□ 2.25
SMPD1-209ENST00000533196 TCP10L2B9ZVM9 353 aa29.07■■■□□ 2.24
SMPD1-209ENST00000533196 INHBEP58166 350 aa29.07■■■□□ 2.24
SMPD1-209ENST00000533196 ANKRD13AQ8IZ07 590 aa29.07■■■□□ 2.24
SMPD1-209ENST00000533196 TMEM57Q8N5G2 664 aa29.07■■■□□ 2.24
SMPD1-209ENST00000533196 FZD1Q9UP38 647 aa29.07■■■□□ 2.24
SMPD1-209ENST00000533196 APOBEC3HQ6NTF7 200 aaKnown RBP29.06■■■□□ 2.24
SMPD1-209ENST00000533196 FAM83AQ86UY5 434 aa29.06■■■□□ 2.24
SMPD1-209ENST00000533196 MANSC4A6NHS7 340 aaPredicted RBP29.05■■■□□ 2.24
SMPD1-209ENST00000533196 PDS5AQ29RF7 1337 aaKnown RBP29.04■■■□□ 2.24
SMPD1-209ENST00000533196 PHKA1P46020 1223 aa29.04■■■□□ 2.24
SMPD1-209ENST00000533196 MKRN3Q13064 507 aaKnown RBP29.04■■■□□ 2.24
SMPD1-209ENST00000533196 NOM1Q5C9Z4 860 aaKnown RBP29.04■■■□□ 2.24
SMPD1-209ENST00000533196 CCDC102BQ68D86 513 aa29.04■■■□□ 2.24
SMPD1-209ENST00000533196 ZGPATQ8N5A5 531 aaKnown RBP29.04■■■□□ 2.24
SMPD1-209ENST00000533196 WNK4Q96J92 1243 aa29.04■■■□□ 2.24
SMPD1-209ENST00000533196 CFHR5Q9BXR6 569 aa29.04■■■□□ 2.24
SMPD1-209ENST00000533196 MCOLN1Q9GZU1 580 aa29.04■■■□□ 2.24
SMPD1-209ENST00000533196 OTOFQ9HC10 1997 aa29.03■■■□□ 2.24
SMPD1-209ENST00000533196 ALDH1A1P00352 501 aa29.03■■■□□ 2.24
SMPD1-209ENST00000533196 DGKZQ13574 1117 aa29.03■■■□□ 2.24
SMPD1-209ENST00000533196 FTSJ3Q8IY81 847 aaKnown RBP29.03■■■□□ 2.24
SMPD1-209ENST00000533196 HOOK2Q96ED9 719 aa29.03■■■□□ 2.24
SMPD1-209ENST00000533196 CLMNQ96JQ2 1002 aa29.03■■■□□ 2.24
SMPD1-209ENST00000533196 TMEM39BQ9GZU3 492 aa29.03■■■□□ 2.24
SMPD1-209ENST00000533196 A0A1B0GUL7 405 aa29.02■■■□□ 2.24
SMPD1-209ENST00000533196 LDHBP07195 334 aaKnown RBP29.02■■■□□ 2.24
SMPD1-209ENST00000533196 TFCP2Q12800 502 aa29.02■■■□□ 2.24
SMPD1-209ENST00000533196 RPAP1Q9BWH6 1393 aaPredicted RBP29.01■■■□□ 2.24
SMPD1-209ENST00000533196 ADORA1P30542 326 aa29.01■■■□□ 2.23
SMPD1-209ENST00000533196 TIMM10P62072 90 aa29.01■■■□□ 2.23
SMPD1-209ENST00000533196 G3BP1Q13283 466 aaKnown RBP eCLIP29.01■■■□□ 2.23
SMPD1-209ENST00000533196 MVPQ14764 893 aaKnown RBP29.01■■■□□ 2.23
SMPD1-209ENST00000533196 PRDX5P30044 214 aa29■■■□□ 2.23
SMPD1-209ENST00000533196 XAGE2Q96GT9 111 aa29■■■□□ 2.23
SMPD1-209ENST00000533196 PNMA6EA0A0J9YXQ4 647 aa28.99■■■□□ 2.23
SMPD1-209ENST00000533196 DAGLAQ9Y4D2 1042 aa28.99■■■□□ 2.23
SMPD1-209ENST00000533196 CACNB3P54284 484 aa28.98■■■□□ 2.23
SMPD1-209ENST00000533196 CDAN1Q8IWY9 1227 aa28.98■■■□□ 2.23
SMPD1-209ENST00000533196 MYH2Q9UKX2 1941 aa28.98■■■□□ 2.23
SMPD1-209ENST00000533196 TBC1D8O95759 1140 aa28.97■■■□□ 2.23
SMPD1-209ENST00000533196 MAP3K9P80192 1104 aa28.97■■■□□ 2.23
SMPD1-209ENST00000533196 RASGRF1Q13972 1273 aa28.97■■■□□ 2.23
SMPD1-209ENST00000533196 POLA2Q14181 598 aa28.97■■■□□ 2.23
SMPD1-209ENST00000533196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.97■■■□□ 2.23
SMPD1-209ENST00000533196 ATP8B2P98198 1209 aa28.96■■■□□ 2.23
SMPD1-209ENST00000533196 DIXDC1Q155Q3 683 aa28.96■■■□□ 2.23
SMPD1-209ENST00000533196 SPTY2D1Q68D10 685 aaPredicted RBP28.96■■■□□ 2.23
SMPD1-209ENST00000533196 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.96■■■□□ 2.23
SMPD1-209ENST00000533196 CTU1Q7Z7A3 348 aaKnown RBP28.96■■■□□ 2.23
SMPD1-209ENST00000533196 IFNL1Q8IU54 200 aa28.96■■■□□ 2.23
SMPD1-209ENST00000533196 NEUROD6Q96NK8 337 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms