RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 TBC1D22AQ8WUA7 517 aa17.32■□□□□ 0.36
COL16A1-217ENST00000532877 ABCF2Q9UG63 623 aa17.32■□□□□ 0.36
COL16A1-217ENST00000532877 PASKQ96RG2 1323 aa17.31■□□□□ 0.36
COL16A1-217ENST00000532877 IDH1O75874 414 aaKnown RBP17.31■□□□□ 0.36
COL16A1-217ENST00000532877 DACT2Q5SW24 774 aa17.31■□□□□ 0.36
COL16A1-217ENST00000532877 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
COL16A1-217ENST00000532877 CERS5Q8N5B7 392 aa17.31■□□□□ 0.36
COL16A1-217ENST00000532877 FZD9O00144 591 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 CDC45O75419 566 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 RAD17O75943 681 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 POTEIP0CG38 1075 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 POTEJP0CG39 1038 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 PRDX5P30044 214 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 GRIK5Q16478 980 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 LRP2BPQ9P2M1 347 aa17.3■□□□□ 0.36
COL16A1-217ENST00000532877 MKRN1Q9UHC7 482 aaKnown RBP17.3■□□□□ 0.36
COL16A1-217ENST00000532877 PSMD14O00487 310 aa17.29■□□□□ 0.36
COL16A1-217ENST00000532877 FKBP1AP62942 108 aaKnown RBP17.29■□□□□ 0.36
COL16A1-217ENST00000532877 CXCL9Q07325 125 aa17.29■□□□□ 0.36
COL16A1-217ENST00000532877 MAP3K12Q12852 859 aa17.29■□□□□ 0.36
COL16A1-217ENST00000532877 SPTY2D1Q68D10 685 aaPredicted RBP17.29■□□□□ 0.36
COL16A1-217ENST00000532877 CHADLQ6NUI6 762 aa17.29■□□□□ 0.36
COL16A1-217ENST00000532877 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
COL16A1-217ENST00000532877 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.29■□□□□ 0.36
COL16A1-217ENST00000532877 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
COL16A1-217ENST00000532877 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
COL16A1-217ENST00000532877 CHGBP05060 677 aa17.28■□□□□ 0.36
COL16A1-217ENST00000532877 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
COL16A1-217ENST00000532877 PDE6AP16499 860 aa17.28■□□□□ 0.36
COL16A1-217ENST00000532877 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
COL16A1-217ENST00000532877 ZSCAN25Q6NSZ9 544 aa17.28■□□□□ 0.36
COL16A1-217ENST00000532877 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
COL16A1-217ENST00000532877 SUGT1Q9Y2Z0 365 aa17.28■□□□□ 0.36
COL16A1-217ENST00000532877 HIP1O00291 1037 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 RNF113AO15541 343 aaKnown RBP17.27■□□□□ 0.36
COL16A1-217ENST00000532877 ZFYP08048 801 aaPredicted RBP17.27■□□□□ 0.36
COL16A1-217ENST00000532877 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.36
COL16A1-217ENST00000532877 CHMLP26374 656 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 ADD2P35612 726 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
COL16A1-217ENST00000532877 MECOMQ03112 1051 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 SLFNL1Q499Z3 407 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 SLC9C2Q5TAH2 1124 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 CIAPIN1Q6FI81 312 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
COL16A1-217ENST00000532877 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.36
COL16A1-217ENST00000532877 MAGEB6Q8N7X4 407 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 ZNF384Q8TF68 577 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.36
COL16A1-217ENST00000532877 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.36
COL16A1-217ENST00000532877 MYO3BQ8WXR4 1341 aa17.26■□□□□ 0.35
COL16A1-217ENST00000532877 MYH2Q9UKX2 1941 aa17.26■□□□□ 0.35
COL16A1-217ENST00000532877 TCRBV5S4A2TA0A5A2 114 aa17.26■□□□□ 0.35
COL16A1-217ENST00000532877 IGSF3O75054 1194 aa17.26■□□□□ 0.35
COL16A1-217ENST00000532877 UBE3CQ15386 1083 aa17.26■□□□□ 0.35
COL16A1-217ENST00000532877 C8orf34Q49A92 452 aa17.26■□□□□ 0.35
COL16A1-217ENST00000532877 DPY19L2Q6NUT2 758 aa17.26■□□□□ 0.35
COL16A1-217ENST00000532877 WBP1LQ9NX94 342 aa17.26■□□□□ 0.35
COL16A1-217ENST00000532877 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
COL16A1-217ENST00000532877 ZNF532Q9HCE3 1301 aa17.25■□□□□ 0.35
COL16A1-217ENST00000532877 A0A0D9SFI3 127 aa17.25■□□□□ 0.35
COL16A1-217ENST00000532877 NMIQ13287 307 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-217ENST00000532877 TNIP1Q15025 636 aa17.25■□□□□ 0.35
COL16A1-217ENST00000532877 ZMYM1Q5SVZ6 1142 aa17.25■□□□□ 0.35
COL16A1-217ENST00000532877 NAA16Q6N069 864 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-217ENST00000532877 CASC1Q6TDU7 716 aa17.25■□□□□ 0.35
COL16A1-217ENST00000532877 FAM227BQ96M60 508 aa17.25■□□□□ 0.35
COL16A1-217ENST00000532877 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-217ENST00000532877 ITGBL1O95965 494 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-217ENST00000532877 CTCFP49711 727 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-217ENST00000532877 TMED8Q6PL24 325 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-217ENST00000532877 CWC27Q6UX04 472 aaKnown RBP17.24■□□□□ 0.35
COL16A1-217ENST00000532877 KIAA0825Q8IV33 1275 aa17.24■□□□□ 0.35
COL16A1-217ENST00000532877 APPBP2Q92624 585 aa17.24■□□□□ 0.35
COL16A1-217ENST00000532877 GMLQ99445 158 aa17.24■□□□□ 0.35
COL16A1-217ENST00000532877 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
COL16A1-217ENST00000532877 MAST3O60307 1309 aa17.23■□□□□ 0.35
COL16A1-217ENST00000532877 DDNO94850 711 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-217ENST00000532877 CYP7A1P22680 504 aa17.23■□□□□ 0.35
COL16A1-217ENST00000532877 VEGFBP49765 207 aa17.23■□□□□ 0.35
COL16A1-217ENST00000532877 DIXDC1Q155Q3 683 aa17.23■□□□□ 0.35
COL16A1-217ENST00000532877 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
COL16A1-217ENST00000532877 AGBL3Q8NEM8 1001 aa17.23■□□□□ 0.35
COL16A1-217ENST00000532877 OSBP2Q969R2 916 aa17.23■□□□□ 0.35
COL16A1-217ENST00000532877 L3MBTL3Q96JM7 780 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-217ENST00000532877 IL25Q9H293 177 aa17.23■□□□□ 0.35
COL16A1-217ENST00000532877 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-217ENST00000532877 RAD50Q92878 1312 aa17.22■□□□□ 0.35
COL16A1-217ENST00000532877 GSTO1P78417 241 aa17.22■□□□□ 0.35
COL16A1-217ENST00000532877 SEC62Q99442 399 aaKnown RBP17.22■□□□□ 0.35
COL16A1-217ENST00000532877 ESYT1Q9BSJ8 1104 aa17.22■□□□□ 0.35
COL16A1-217ENST00000532877 HELLSQ9NRZ9 838 aa17.22■□□□□ 0.35
COL16A1-217ENST00000532877 GJA3Q9Y6H8 435 aa17.22■□□□□ 0.35
COL16A1-217ENST00000532877 MROH7-TTC4A0A0A0MT08 1334 aa17.21■□□□□ 0.35
COL16A1-217ENST00000532877 M0R2C6 588 aa17.21■□□□□ 0.35
COL16A1-217ENST00000532877 SGSM2O43147 1006 aa17.21■□□□□ 0.35
COL16A1-217ENST00000532877 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
COL16A1-217ENST00000532877 SCNN1DP51172 638 aa17.21■□□□□ 0.35
COL16A1-217ENST00000532877 GPC2Q8N158 579 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms