RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SUPT20HL1Q3ZLR7 823 aa21.37■■□□□ 1.01
PHRF1-204ENST00000532550 MRIQ9BWK5 157 aa21.37■■□□□ 1.01
PHRF1-204ENST00000532550 TDRD3Q9H7E2 651 aaKnown RBP21.37■■□□□ 1.01
PHRF1-204ENST00000532550 ZNF70Q9UC06 446 aaPredicted RBP21.37■■□□□ 1.01
PHRF1-204ENST00000532550 AKAP2Q9Y2D5 859 aa21.37■■□□□ 1.01
PHRF1-204ENST00000532550 ECM29Q5VYK3 1845 aa21.36■■□□□ 1.01
PHRF1-204ENST00000532550 TNFAIP1Q13829 316 aa21.36■■□□□ 1.01
PHRF1-204ENST00000532550 SPDYE2Q495Y8 402 aa21.36■■□□□ 1.01
PHRF1-204ENST00000532550 TEKT1Q969V4 418 aa21.36■■□□□ 1.01
PHRF1-204ENST00000532550 COL1A1P02452 1464 aaPredicted RBP21.36■■□□□ 1.01
PHRF1-204ENST00000532550 MAST3O60307 1309 aa21.35■■□□□ 1.01
PHRF1-204ENST00000532550 AOX1Q06278 1338 aa21.35■■□□□ 1.01
PHRF1-204ENST00000532550 PPP1R12BO60237 982 aaPredicted RBP21.35■■□□□ 1.01
PHRF1-204ENST00000532550 TIMM10P62072 90 aa21.35■■□□□ 1.01
PHRF1-204ENST00000532550 G3BP1Q13283 466 aaKnown RBP eCLIP21.35■■□□□ 1.01
PHRF1-204ENST00000532550 RASA3Q14644 834 aa21.35■■□□□ 1.01
PHRF1-204ENST00000532550 RASAL3Q86YV0 1011 aa21.35■■□□□ 1.01
PHRF1-204ENST00000532550 ITPRIPQ8IWB1 547 aa21.35■■□□□ 1.01
PHRF1-204ENST00000532550 REM2Q8IYK8 340 aaPredicted RBP21.35■■□□□ 1.01
PHRF1-204ENST00000532550 TSKSQ9UJT2 592 aa21.35■■□□□ 1.01
PHRF1-204ENST00000532550 ANGEL1Q9UNK9 670 aaKnown RBP21.35■■□□□ 1.01
PHRF1-204ENST00000532550 TFCP2Q12800 502 aa21.34■■□□□ 1.01
PHRF1-204ENST00000532550 DENND2AQ9ULE3 1009 aa21.34■■□□□ 1.01
PHRF1-204ENST00000532550 PNMA6EA0A0J9YXQ4 647 aa21.33■■□□□ 1.01
PHRF1-204ENST00000532550 SEMA3EO15041 775 aa21.33■■□□□ 1.01
PHRF1-204ENST00000532550 TNNI2P48788 182 aa21.33■■□□□ 1.01
PHRF1-204ENST00000532550 NBPF12Q5TAG4 269 aaPredicted RBP21.33■■□□□ 1.01
PHRF1-204ENST00000532550 CSRNP1Q96S65 589 aa21.33■■□□□ 1.01
PHRF1-204ENST00000532550 ARAP2Q8WZ64 1704 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 A0A1B0GUL7 405 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 TCP10L2B9ZVM9 353 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 ZBTB7BO15156 539 aaPredicted RBP21.32■■□□□ 1
PHRF1-204ENST00000532550 RLBP1P12271 317 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 ADORA1P30542 326 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 PHKA1P46020 1223 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 ATP8B2P98198 1209 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 CCDC102BQ68D86 513 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 HHIPL2Q6UWX4 724 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 NEUROD6Q96NK8 337 aa21.32■■□□□ 1
PHRF1-204ENST00000532550 MYH13Q9UKX3 1938 aa21.31■■□□□ 1
PHRF1-204ENST00000532550 MS4A1P11836 297 aa21.31■■□□□ 1
PHRF1-204ENST00000532550 LDLRAD1Q5T700 205 aa21.31■■□□□ 1
PHRF1-204ENST00000532550 SLC10A4Q96EP9 437 aa21.31■■□□□ 1
PHRF1-204ENST00000532550 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
PHRF1-204ENST00000532550 TMOD2Q9NZR1 351 aa21.31■■□□□ 1
PHRF1-204ENST00000532550 FZD1Q9UP38 647 aa21.31■■□□□ 1
PHRF1-204ENST00000532550 MAP3K11Q16584 847 aa21.3■■□□□ 1
PHRF1-204ENST00000532550 XAGE2Q96GT9 111 aa21.3■■□□□ 1
PHRF1-204ENST00000532550 AKAP11Q9UKA4 1901 aa21.29■■□□□ 1
PHRF1-204ENST00000532550 TRPA1O75762 1119 aa21.29■■□□□ 1
PHRF1-204ENST00000532550 LDHBP07195 334 aaKnown RBP21.29■■□□□ 1
PHRF1-204ENST00000532550 IREB2P48200 963 aaKnown RBP21.29■■□□□ 1
PHRF1-204ENST00000532550 MVPQ14764 893 aaKnown RBP21.29■■□□□ 1
PHRF1-204ENST00000532550 GORABQ5T7V8 394 aa21.29■■□□□ 1
PHRF1-204ENST00000532550 C1orf115Q9H7X2 142 aa21.29■■□□□ 1
PHRF1-204ENST00000532550 RNF186Q9NXI6 227 aa21.29■■□□□ 1
PHRF1-204ENST00000532550 SAGE1Q9NXZ1 904 aa21.29■■□□□ 1
PHRF1-204ENST00000532550 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.29■■□□□ 1
PHRF1-204ENST00000532550 UNCXA6NJT0 531 aa21.28■■□□□ 1
PHRF1-204ENST00000532550 ZBTB22O15209 634 aa21.28■■□□□ 1
PHRF1-204ENST00000532550 USP2O75604 605 aaPredicted RBP21.28■■□□□ 1
PHRF1-204ENST00000532550 OS9Q13438 667 aaPredicted RBP21.28■■□□□ 1
PHRF1-204ENST00000532550 POLA2Q14181 598 aa21.28■■□□□ 1
PHRF1-204ENST00000532550 APOBEC3HQ6NTF7 200 aaKnown RBP21.28■■□□□ 1
PHRF1-204ENST00000532550 ZGPATQ8N5A5 531 aaKnown RBP21.28■■□□□ 1
PHRF1-204ENST00000532550 SSH3Q8TE77 659 aa21.28■■□□□ 1
PHRF1-204ENST00000532550 SALL1Q9NSC2 1324 aa21.28■■□□□ 1
PHRF1-204ENST00000532550 PRDX5P30044 214 aa21.27■■□□□ 1
PHRF1-204ENST00000532550 MKRN3Q13064 507 aaKnown RBP21.27■■□□□ 1
PHRF1-204ENST00000532550 PANK1Q8TE04 598 aa21.27■■□□□ 1
PHRF1-204ENST00000532550 TMEM39BQ9GZU3 492 aa21.27■■□□□ 1
PHRF1-204ENST00000532550 SURF6O75683 361 aaKnown RBP21.26■□□□□ 0.99
PHRF1-204ENST00000532550 CAPN15O75808 1086 aa21.26■□□□□ 0.99
PHRF1-204ENST00000532550 CACNB3P54284 484 aa21.26■□□□□ 0.99
PHRF1-204ENST00000532550 FKBP1CQ5VVH2 108 aa21.26■□□□□ 0.99
PHRF1-204ENST00000532550 TEPSINQ96N21 525 aa21.26■□□□□ 0.99
PHRF1-204ENST00000532550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.26■□□□□ 0.99
PHRF1-204ENST00000532550 CASP8AP2Q9UKL3 1982 aa21.26■□□□□ 0.99
PHRF1-204ENST00000532550 TM4SF4P48230 202 aa21.25■□□□□ 0.99
PHRF1-204ENST00000532550 RASGRF1Q13972 1273 aa21.25■□□□□ 0.99
PHRF1-204ENST00000532550 DIXDC1Q155Q3 683 aa21.25■□□□□ 0.99
PHRF1-204ENST00000532550 SPRYD7Q5W111 196 aa21.25■□□□□ 0.99
PHRF1-204ENST00000532550 SPTY2D1Q68D10 685 aaPredicted RBP21.25■□□□□ 0.99
PHRF1-204ENST00000532550 ANKRD13AQ8IZ07 590 aa21.25■□□□□ 0.99
PHRF1-204ENST00000532550 ABCF2Q9UG63 623 aa21.25■□□□□ 0.99
PHRF1-204ENST00000532550 SSC5DA1L4H1 1573 aa21.24■□□□□ 0.99
PHRF1-204ENST00000532550 SREBF2Q12772 1141 aa21.24■□□□□ 0.99
PHRF1-204ENST00000532550 FAM83AQ86UY5 434 aa21.24■□□□□ 0.99
PHRF1-204ENST00000532550 CLMNQ96JQ2 1002 aa21.24■□□□□ 0.99
PHRF1-204ENST00000532550 RCAN3Q9UKA8 241 aa21.24■□□□□ 0.99
PHRF1-204ENST00000532550 DAGLAQ9Y4D2 1042 aa21.24■□□□□ 0.99
PHRF1-204ENST00000532550 HOOK2Q96ED9 719 aa21.23■□□□□ 0.99
PHRF1-204ENST00000532550 GPR108Q9NPR9 543 aa21.23■□□□□ 0.99
PHRF1-204ENST00000532550 PDS5AQ29RF7 1337 aaKnown RBP21.23■□□□□ 0.99
PHRF1-204ENST00000532550 CDC42EP5Q6NZY7 148 aa21.22■□□□□ 0.99
PHRF1-204ENST00000532550 DZIP1Q86YF9 867 aaKnown RBP21.22■□□□□ 0.99
PHRF1-204ENST00000532550 CDAN1Q8IWY9 1227 aa21.22■□□□□ 0.99
PHRF1-204ENST00000532550 SLF2Q8IX21 1173 aa21.22■□□□□ 0.99
PHRF1-204ENST00000532550 USP40Q9NVE5 1235 aa21.22■□□□□ 0.99
PHRF1-204ENST00000532550 UQCRFS1P1P0C7P4 283 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms