RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 DDX19BQ9UMR2 479 aa28.39■■■□□ 2.14
CAPN1-222ENST00000532285 CLRN2A0PK11 232 aa28.38■■■□□ 2.13
CAPN1-222ENST00000532285 MAP2K2P36507 400 aa28.38■■■□□ 2.13
CAPN1-222ENST00000532285 RGMBQ6NW40 437 aa28.38■■■□□ 2.13
CAPN1-222ENST00000532285 TEKT1Q969V4 418 aa28.38■■■□□ 2.13
CAPN1-222ENST00000532285 NEUROD6Q96NK8 337 aa28.38■■■□□ 2.13
CAPN1-222ENST00000532285 COG6Q9Y2V7 657 aa28.38■■■□□ 2.13
CAPN1-222ENST00000532285 PPP2R3BQ9Y5P8 575 aa28.38■■■□□ 2.13
CAPN1-222ENST00000532285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.38■■■□□ 2.13
CAPN1-222ENST00000532285 SURF6O75683 361 aaKnown RBP28.37■■■□□ 2.13
CAPN1-222ENST00000532285 MAP2K1Q02750 393 aaPredicted RBP28.37■■■□□ 2.13
CAPN1-222ENST00000532285 OS9Q13438 667 aaPredicted RBP28.37■■■□□ 2.13
CAPN1-222ENST00000532285 CEP85Q6P2H3 762 aa28.37■■■□□ 2.13
CAPN1-222ENST00000532285 VEZTQ9HBM0 779 aa28.37■■■□□ 2.13
CAPN1-222ENST00000532285 AOX1Q06278 1338 aa28.37■■■□□ 2.13
CAPN1-222ENST00000532285 SPDYE2Q495Y8 402 aa28.36■■■□□ 2.13
CAPN1-222ENST00000532285 CHMP4BQ9H444 224 aaKnown RBP28.36■■■□□ 2.13
CAPN1-222ENST00000532285 TDRD3Q9H7E2 651 aaKnown RBP28.36■■■□□ 2.13
CAPN1-222ENST00000532285 WBP1LQ9NX94 342 aa28.36■■■□□ 2.13
CAPN1-222ENST00000532285 ZNF70Q9UC06 446 aaPredicted RBP28.36■■■□□ 2.13
CAPN1-222ENST00000532285 NOP58Q9Y2X3 529 aaKnown RBP28.36■■■□□ 2.13
CAPN1-222ENST00000532285 AOC2O75106 756 aa28.35■■■□□ 2.13
CAPN1-222ENST00000532285 PDE3AQ14432 1141 aa28.35■■■□□ 2.13
CAPN1-222ENST00000532285 CCDC102AQ96A19 550 aa28.35■■■□□ 2.13
CAPN1-222ENST00000532285 AIDAQ96BJ3 306 aa28.35■■■□□ 2.13
CAPN1-222ENST00000532285 GPR108Q9NPR9 543 aa28.35■■■□□ 2.13
CAPN1-222ENST00000532285 SALL1Q9NSC2 1324 aa28.35■■■□□ 2.13
CAPN1-222ENST00000532285 ZNF157P51786 506 aaPredicted RBP28.34■■■□□ 2.13
CAPN1-222ENST00000532285 TNFAIP1Q13829 316 aa28.34■■■□□ 2.13
CAPN1-222ENST00000532285 GORABQ5T7V8 394 aa28.34■■■□□ 2.13
CAPN1-222ENST00000532285 HHIPL2Q6UWX4 724 aa28.34■■■□□ 2.13
CAPN1-222ENST00000532285 ZDHHC15Q96MV8 337 aa28.34■■■□□ 2.13
CAPN1-222ENST00000532285 PDS5AQ29RF7 1337 aaKnown RBP28.34■■■□□ 2.13
CAPN1-222ENST00000532285 NOGQ13253 232 aa28.33■■■□□ 2.13
CAPN1-222ENST00000532285 TTLL12Q14166 644 aaPredicted RBP28.33■■■□□ 2.13
CAPN1-222ENST00000532285 ZGPATQ8N5A5 531 aaKnown RBP28.33■■■□□ 2.13
CAPN1-222ENST00000532285 ZBTB40Q9NUA8 1239 aa28.33■■■□□ 2.13
CAPN1-222ENST00000532285 LDHBP07195 334 aaKnown RBP28.32■■■□□ 2.12
CAPN1-222ENST00000532285 RASGRF1Q13972 1273 aa28.32■■■□□ 2.12
CAPN1-222ENST00000532285 RASA3Q14644 834 aa28.31■■■□□ 2.12
CAPN1-222ENST00000532285 SUPT20HL1Q3ZLR7 823 aa28.31■■■□□ 2.12
CAPN1-222ENST00000532285 MOB2Q70IA6 237 aa28.31■■■□□ 2.12
CAPN1-222ENST00000532285 MYH2Q9UKX2 1941 aa28.31■■■□□ 2.12
CAPN1-222ENST00000532285 FAM155AB1AL88 458 aaPredicted RBP28.3■■■□□ 2.12
CAPN1-222ENST00000532285 UBE2Q2LH0YL09 131 aa28.3■■■□□ 2.12
CAPN1-222ENST00000532285 PRDX5P30044 214 aa28.3■■■□□ 2.12
CAPN1-222ENST00000532285 TNNI3KQ59H18 835 aa28.3■■■□□ 2.12
CAPN1-222ENST00000532285 ARMC9Q7Z3E5 817 aa28.3■■■□□ 2.12
CAPN1-222ENST00000532285 RPAP2Q8IXW5 612 aaPredicted RBP28.3■■■□□ 2.12
CAPN1-222ENST00000532285 FPGT-TNNI3KV9GXZ4 949 aa28.3■■■□□ 2.12
CAPN1-222ENST00000532285 FOXN1O15353 648 aa28.29■■■□□ 2.12
CAPN1-222ENST00000532285 C20orf194Q5TEA3 1177 aa28.29■■■□□ 2.12
CAPN1-222ENST00000532285 APOBEC3HQ6NTF7 200 aaKnown RBP28.29■■■□□ 2.12
CAPN1-222ENST00000532285 BEGAINQ9BUH8 593 aa28.29■■■□□ 2.12
CAPN1-222ENST00000532285 SLC10A3P09131 477 aa28.28■■■□□ 2.12
CAPN1-222ENST00000532285 ARID4AP29374 1257 aaPredicted RBP28.28■■■□□ 2.12
CAPN1-222ENST00000532285 TNNI2P48788 182 aa28.28■■■□□ 2.12
CAPN1-222ENST00000532285 YTHDC1Q96MU7 727 aaKnown RBP28.28■■■□□ 2.12
CAPN1-222ENST00000532285 TMOD2Q9NZR1 351 aa28.28■■■□□ 2.12
CAPN1-222ENST00000532285 TCP10L2B9ZVM9 353 aa28.27■■■□□ 2.12
CAPN1-222ENST00000532285 UQCRFS1P1P0C7P4 283 aa28.27■■■□□ 2.12
CAPN1-222ENST00000532285 CTCFP49711 727 aaPredicted RBP28.27■■■□□ 2.12
CAPN1-222ENST00000532285 PRKG1Q13976 671 aa28.27■■■□□ 2.12
CAPN1-222ENST00000532285 SPTY2D1Q68D10 685 aaPredicted RBP28.27■■■□□ 2.12
CAPN1-222ENST00000532285 PPP1R12BO60237 982 aaPredicted RBP28.26■■■□□ 2.11
CAPN1-222ENST00000532285 HSP90AB4PQ58FF6 505 aa28.26■■■□□ 2.11
CAPN1-222ENST00000532285 NBPF12Q5TAG4 269 aaPredicted RBP28.26■■■□□ 2.11
CAPN1-222ENST00000532285 ERC1Q8IUD2 1116 aa28.26■■■□□ 2.11
CAPN1-222ENST00000532285 DAGLAQ9Y4D2 1042 aa28.26■■■□□ 2.11
CAPN1-222ENST00000532285 HMMRO75330 724 aa28.25■■■□□ 2.11
CAPN1-222ENST00000532285 DIXDC1Q155Q3 683 aa28.25■■■□□ 2.11
CAPN1-222ENST00000532285 FKBP1CQ5VVH2 108 aa28.25■■■□□ 2.11
CAPN1-222ENST00000532285 RASAL3Q86YV0 1011 aa28.25■■■□□ 2.11
CAPN1-222ENST00000532285 SPATA5Q8NB90 893 aa28.25■■■□□ 2.11
CAPN1-222ENST00000532285 HMG20BQ9P0W2 317 aa28.25■■■□□ 2.11
CAPN1-222ENST00000532285 ABCF2Q9UG63 623 aa28.25■■■□□ 2.11
CAPN1-222ENST00000532285 ANGEL1Q9UNK9 670 aaKnown RBP28.25■■■□□ 2.11
CAPN1-222ENST00000532285 SSC5DA1L4H1 1573 aa28.24■■■□□ 2.11
CAPN1-222ENST00000532285 AKAP11Q9UKA4 1901 aa28.24■■■□□ 2.11
CAPN1-222ENST00000532285 CCDC158Q5M9N0 1113 aa28.24■■■□□ 2.11
CAPN1-222ENST00000532285 ZIC5Q96T25 663 aa28.24■■■□□ 2.11
CAPN1-222ENST00000532285 EXOC6BQ9Y2D4 811 aa28.24■■■□□ 2.11
CAPN1-222ENST00000532285 MAP3K11Q16584 847 aa28.23■■■□□ 2.11
CAPN1-222ENST00000532285 LDLRAD1Q5T700 205 aa28.23■■■□□ 2.11
CAPN1-222ENST00000532285 DZIP1Q86YF9 867 aaKnown RBP28.23■■■□□ 2.11
CAPN1-222ENST00000532285 SLF2Q8IX21 1173 aa28.23■■■□□ 2.11
CAPN1-222ENST00000532285 TEPSINQ96N21 525 aa28.23■■■□□ 2.11
CAPN1-222ENST00000532285 DBNDD2Q9BQY9 259 aa28.23■■■□□ 2.11
CAPN1-222ENST00000532285 CACNB3P54284 484 aa28.22■■■□□ 2.11
CAPN1-222ENST00000532285 KIF23Q02241 960 aaPredicted RBP28.22■■■□□ 2.11
CAPN1-222ENST00000532285 TTC39AQ5SRH9 613 aa28.22■■■□□ 2.11
CAPN1-222ENST00000532285 ERICH6Q7L0X2 663 aa28.22■■■□□ 2.11
CAPN1-222ENST00000532285 FAM83AQ86UY5 434 aa28.22■■■□□ 2.11
CAPN1-222ENST00000532285 SIRT2Q8IXJ6 389 aa28.22■■■□□ 2.11
CAPN1-222ENST00000532285 TMEM39BQ9GZU3 492 aa28.22■■■□□ 2.11
CAPN1-222ENST00000532285 UNCXA6NJT0 531 aa28.21■■■□□ 2.11
CAPN1-222ENST00000532285 CA12O43570 354 aa28.21■■■□□ 2.11
CAPN1-222ENST00000532285 MCAMP43121 646 aa28.21■■■□□ 2.11
CAPN1-222ENST00000532285 FZD1Q9UP38 647 aa28.21■■■□□ 2.11
CAPN1-222ENST00000532285 AK9Q5TCS8 1911 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms