RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 CDC37L1Q7L3B6 337 aa25.44■■□□□ 1.66
CCS-207ENST00000531990 TEKT1Q969V4 418 aa25.44■■□□□ 1.66
CCS-207ENST00000531990 GCC1Q96CN9 775 aa25.44■■□□□ 1.66
CCS-207ENST00000531990 POLR2AP24928 1970 aaKnown RBP25.44■■□□□ 1.66
CCS-207ENST00000531990 ECM29Q5VYK3 1845 aa25.43■■□□□ 1.66
CCS-207ENST00000531990 SMARCA5O60264 1052 aaPredicted RBP25.43■■□□□ 1.66
CCS-207ENST00000531990 ITGBL1O95965 494 aaPredicted RBP25.43■■□□□ 1.66
CCS-207ENST00000531990 CRKP46108 304 aa25.43■■□□□ 1.66
CCS-207ENST00000531990 SULF1Q8IWU6 871 aa25.43■■□□□ 1.66
CCS-207ENST00000531990 ZBED3Q96IU2 234 aaPredicted RBP25.43■■□□□ 1.66
CCS-207ENST00000531990 PITPNM2Q9BZ72 1349 aa25.42■■□□□ 1.66
CCS-207ENST00000531990 AKAP11Q9UKA4 1901 aa25.42■■□□□ 1.66
CCS-207ENST00000531990 PRDX5P30044 214 aa25.42■■□□□ 1.66
CCS-207ENST00000531990 PI16Q6UXB8 463 aa25.42■■□□□ 1.66
CCS-207ENST00000531990 KRT26Q7Z3Y9 468 aa25.42■■□□□ 1.66
CCS-207ENST00000531990 MRIQ9BWK5 157 aa25.42■■□□□ 1.66
CCS-207ENST00000531990 SNRKQ9NRH2 765 aa25.42■■□□□ 1.66
CCS-207ENST00000531990 ASTN2O75129 1339 aaPredicted RBP25.41■■□□□ 1.66
CCS-207ENST00000531990 SPDYE2BA6NHP3 402 aa25.41■■□□□ 1.66
CCS-207ENST00000531990 SPDYE6P0CI01 402 aa25.41■■□□□ 1.66
CCS-207ENST00000531990 HSPA6P17066 643 aa25.41■■□□□ 1.66
CCS-207ENST00000531990 ERICH6Q7L0X2 663 aa25.41■■□□□ 1.66
CCS-207ENST00000531990 GLIS2Q9BZE0 524 aaPredicted RBP25.41■■□□□ 1.66
CCS-207ENST00000531990 USP48Q86UV5 1035 aa25.4■■□□□ 1.66
CCS-207ENST00000531990 DZIP1Q86YF9 867 aaKnown RBP25.4■■□□□ 1.66
CCS-207ENST00000531990 PRMT6Q96LA8 375 aaPredicted RBP25.4■■□□□ 1.66
CCS-207ENST00000531990 PASKQ96RG2 1323 aa25.39■■□□□ 1.66
CCS-207ENST00000531990 HHIPL2Q6UWX4 724 aa25.39■■□□□ 1.66
CCS-207ENST00000531990 APOBEC3FQ8IUX4 373 aaKnown RBP25.39■■□□□ 1.66
CCS-207ENST00000531990 SLF2Q8IX21 1173 aa25.39■■□□□ 1.66
CCS-207ENST00000531990 LRP2BPQ9P2M1 347 aa25.39■■□□□ 1.66
CCS-207ENST00000531990 APLP1P51693 650 aa25.38■■□□□ 1.65
CCS-207ENST00000531990 TBC1D9Q6ZT07 1266 aa25.38■■□□□ 1.65
CCS-207ENST00000531990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.38■■□□□ 1.65
CCS-207ENST00000531990 GPATCH3Q96I76 525 aa25.38■■□□□ 1.65
CCS-207ENST00000531990 PCDHAC2Q9Y5I4 1007 aa25.38■■□□□ 1.65
CCS-207ENST00000531990 TRPM7Q96QT4 1865 aa25.37■■□□□ 1.65
CCS-207ENST00000531990 ZAP70P43403 619 aa25.37■■□□□ 1.65
CCS-207ENST00000531990 ANKRD45Q5TZF3 282 aa25.37■■□□□ 1.65
CCS-207ENST00000531990 ZDHHC15Q96MV8 337 aa25.37■■□□□ 1.65
CCS-207ENST00000531990 RAI14Q9P0K7 980 aa25.37■■□□□ 1.65
CCS-207ENST00000531990 MYH2Q9UKX2 1941 aa25.37■■□□□ 1.65
CCS-207ENST00000531990 TRAF5O00463 557 aa25.36■■□□□ 1.65
CCS-207ENST00000531990 GSTO1P78417 241 aa25.36■■□□□ 1.65
CCS-207ENST00000531990 DIXDC1Q155Q3 683 aa25.36■■□□□ 1.65
CCS-207ENST00000531990 CLRN2A0PK11 232 aa25.35■■□□□ 1.65
CCS-207ENST00000531990 ADM5C9JUS6 153 aa25.35■■□□□ 1.65
CCS-207ENST00000531990 CYP2E1P05181 493 aaPredicted RBP25.35■■□□□ 1.65
CCS-207ENST00000531990 VEZTQ9HBM0 779 aa25.35■■□□□ 1.65
CCS-207ENST00000531990 IGSF3O75054 1194 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 IGHDP01880 384 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 LDHCP07864 332 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 ATP5JP18859 108 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 MECOMQ03112 1051 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 SPDYE2Q495Y8 402 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 SMC5Q8IY18 1101 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 TDRD3Q9H7E2 651 aaKnown RBP25.34■■□□□ 1.65
CCS-207ENST00000531990 ECHDC1Q9NTX5 307 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 TMOD2Q9NZR1 351 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 ZNF70Q9UC06 446 aaPredicted RBP25.34■■□□□ 1.65
CCS-207ENST00000531990 DAGLAQ9Y4D2 1042 aa25.34■■□□□ 1.65
CCS-207ENST00000531990 MAST2Q6P0Q8 1798 aa25.33■■□□□ 1.65
CCS-207ENST00000531990 TNFAIP1Q13829 316 aa25.33■■□□□ 1.65
CCS-207ENST00000531990 TTF1Q15361 905 aaPredicted RBP25.33■■□□□ 1.65
CCS-207ENST00000531990 DNAJC2Q99543 621 aaKnown RBP25.33■■□□□ 1.65
CCS-207ENST00000531990 TMEM88BA6NKF7 163 aa25.32■■□□□ 1.64
CCS-207ENST00000531990 NEFLP07196 543 aa25.32■■□□□ 1.64
CCS-207ENST00000531990 APOBEC3HQ6NTF7 200 aaKnown RBP25.32■■□□□ 1.64
CCS-207ENST00000531990 MYO5AQ9Y4I1 1855 aaKnown RBP25.32■■□□□ 1.64
CCS-207ENST00000531990 FMR1Q06787 632 aaKnown RBP eCLIP25.31■■□□□ 1.64
CCS-207ENST00000531990 B4GALNT3Q6L9W6 998 aa25.31■■□□□ 1.64
CCS-207ENST00000531990 NSUN4Q96CB9 384 aaKnown RBP25.31■■□□□ 1.64
CCS-207ENST00000531990 BOLA2Q9H3K6 86 aa25.31■■□□□ 1.64
CCS-207ENST00000531990 ZNF408Q9H9D4 720 aa25.31■■□□□ 1.64
CCS-207ENST00000531990 PIH1D3Q9NQM4 214 aaKnown RBP25.31■■□□□ 1.64
CCS-207ENST00000531990 NDUFB9Q9Y6M9 179 aa25.31■■□□□ 1.64
CCS-207ENST00000531990 MROH7-TTC4A0A0A0MT08 1334 aa25.31■■□□□ 1.64
CCS-207ENST00000531990 AOX1Q06278 1338 aa25.31■■□□□ 1.64
CCS-207ENST00000531990 IDH1O75874 414 aaKnown RBP25.3■■□□□ 1.64
CCS-207ENST00000531990 CELF2O95319 508 aaKnown RBP25.3■■□□□ 1.64
CCS-207ENST00000531990 TNNI2P48788 182 aa25.3■■□□□ 1.64
CCS-207ENST00000531990 NAA16Q6N069 864 aaPredicted RBP25.3■■□□□ 1.64
CCS-207ENST00000531990 CDCA5Q96FF9 252 aa25.3■■□□□ 1.64
CCS-207ENST00000531990 FAM163AQ96GL9 167 aaPredicted RBP25.3■■□□□ 1.64
CCS-207ENST00000531990 CREBZFQ9NS37 354 aa25.3■■□□□ 1.64
CCS-207ENST00000531990 SCAF8Q9UPN6 1271 aaKnown RBP25.3■■□□□ 1.64
CCS-207ENST00000531990 PPP2R3BQ9Y5P8 575 aa25.3■■□□□ 1.64
CCS-207ENST00000531990 GAKO14976 1311 aa25.3■■□□□ 1.64
CCS-207ENST00000531990 DOCK2Q92608 1830 aa25.29■■□□□ 1.64
CCS-207ENST00000531990 MAP3K12Q12852 859 aa25.29■■□□□ 1.64
CCS-207ENST00000531990 NOL10Q9BSC4 688 aaKnown RBP25.29■■□□□ 1.64
CCS-207ENST00000531990 DEFB129Q9H1M3 183 aa25.29■■□□□ 1.64
CCS-207ENST00000531990 TTC41PQ6P2S7 1318 aa25.29■■□□□ 1.64
CCS-207ENST00000531990 GOLIM4O00461 696 aa25.28■■□□□ 1.64
CCS-207ENST00000531990 ERC2O15083 957 aa25.28■■□□□ 1.64
CCS-207ENST00000531990 NF2P35240 595 aa25.28■■□□□ 1.64
CCS-207ENST00000531990 DLK2Q6UY11 383 aa25.28■■□□□ 1.64
CCS-207ENST00000531990 HAUS7Q99871 368 aa25.28■■□□□ 1.64
CCS-207ENST00000531990 ANTXR1Q9H6X2 564 aa25.28■■□□□ 1.64
CCS-207ENST00000531990 PAG1Q9NWQ8 432 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms