RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 TEPSINQ96N21 525 aa24.06■■□□□ 1.44
UBXN1-212ENST00000531625 TDRD3Q9H7E2 651 aaKnown RBP24.06■■□□□ 1.44
UBXN1-212ENST00000531625 EFCC1Q9HA90 598 aa24.06■■□□□ 1.44
UBXN1-212ENST00000531625 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
UBXN1-212ENST00000531625 POTEFA5A3E0 1075 aa24.05■■□□□ 1.44
UBXN1-212ENST00000531625 ARMC5Q96C12 935 aa24.05■■□□□ 1.44
UBXN1-212ENST00000531625 ELP3Q9H9T3 547 aa24.05■■□□□ 1.44
UBXN1-212ENST00000531625 SPINK5Q9NQ38 1064 aaPredicted RBP24.05■■□□□ 1.44
UBXN1-212ENST00000531625 OTOFQ9HC10 1997 aa24.04■■□□□ 1.44
UBXN1-212ENST00000531625 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.04■■□□□ 1.44
UBXN1-212ENST00000531625 SRCIN1Q9C0H9 1055 aa24.04■■□□□ 1.44
UBXN1-212ENST00000531625 RIPOR2Q9Y4F9 1068 aa24.04■■□□□ 1.44
UBXN1-212ENST00000531625 KAZALD1Q96I82 304 aa24.03■■□□□ 1.44
UBXN1-212ENST00000531625 PUS3Q9BZE2 481 aaKnown RBP24.03■■□□□ 1.44
UBXN1-212ENST00000531625 MROH5Q6ZUA9 1318 aa24.03■■□□□ 1.44
UBXN1-212ENST00000531625 RBBP6Q7Z6E9 1792 aaKnown RBP24.03■■□□□ 1.44
UBXN1-212ENST00000531625 CRKP46108 304 aa24.02■■□□□ 1.44
UBXN1-212ENST00000531625 TNNI2P48788 182 aa24.02■■□□□ 1.44
UBXN1-212ENST00000531625 MAP3K9P80192 1104 aa24.02■■□□□ 1.44
UBXN1-212ENST00000531625 HDLBPQ00341 1268 aaKnown RBP24.02■■□□□ 1.44
UBXN1-212ENST00000531625 FBXO33Q7Z6M2 555 aa24.02■■□□□ 1.44
UBXN1-212ENST00000531625 CDAN1Q8IWY9 1227 aa24.02■■□□□ 1.44
UBXN1-212ENST00000531625 SUCLG2Q96I99 432 aa24.02■■□□□ 1.44
UBXN1-212ENST00000531625 ARAP2Q8WZ64 1704 aa24.01■■□□□ 1.43
UBXN1-212ENST00000531625 SLC4A10Q6U841 1118 aa24.01■■□□□ 1.43
UBXN1-212ENST00000531625 BRI3BPQ8WY22 251 aa24.01■■□□□ 1.43
UBXN1-212ENST00000531625 TMEM39BQ9GZU3 492 aa24.01■■□□□ 1.43
UBXN1-212ENST00000531625 UTYO14607 1347 aa24.01■■□□□ 1.43
UBXN1-212ENST00000531625 TCP10L2B9ZVM9 353 aa24■■□□□ 1.43
UBXN1-212ENST00000531625 GTF2A2P52657 109 aa24■■□□□ 1.43
UBXN1-212ENST00000531625 CAP1Q01518 475 aa24■■□□□ 1.43
UBXN1-212ENST00000531625 VGLL4Q14135 290 aa24■■□□□ 1.43
UBXN1-212ENST00000531625 ARHGEF6Q15052 776 aa24■■□□□ 1.43
UBXN1-212ENST00000531625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24■■□□□ 1.435e-9■□□□□ 8.5
UBXN1-212ENST00000531625 TBC1D22AQ8WUA7 517 aa24■■□□□ 1.43
UBXN1-212ENST00000531625 VPS37DQ86XT2 251 aa23.99■■□□□ 1.43
UBXN1-212ENST00000531625 CNKSR2Q8WXI2 1034 aa23.99■■□□□ 1.43
UBXN1-212ENST00000531625 ZFYVE28Q9HCC9 887 aa23.99■■□□□ 1.43
UBXN1-212ENST00000531625 CSADQ9Y600 493 aa23.99■■□□□ 1.43
UBXN1-212ENST00000531625 CCL15-CCL14A0A0B4J2E2 113 aa23.98■■□□□ 1.43
UBXN1-212ENST00000531625 NBPF7P0C2Y1 421 aaPredicted RBP23.98■■□□□ 1.43
UBXN1-212ENST00000531625 TAF1CQ15572 869 aaPredicted RBP23.98■■□□□ 1.43
UBXN1-212ENST00000531625 GRIK5Q16478 980 aa23.98■■□□□ 1.43
UBXN1-212ENST00000531625 CCL15Q16663 113 aa23.98■■□□□ 1.43
UBXN1-212ENST00000531625 RABL6Q3YEC7 729 aaPredicted RBP23.98■■□□□ 1.43
UBXN1-212ENST00000531625 MRIQ9BWK5 157 aa23.98■■□□□ 1.43
UBXN1-212ENST00000531625 CAVIN4Q5BKX8 364 aa23.96■■□□□ 1.43
UBXN1-212ENST00000531625 TEKT1Q969V4 418 aa23.96■■□□□ 1.43
UBXN1-212ENST00000531625 ZNF333Q96JL9 665 aa23.96■■□□□ 1.43
UBXN1-212ENST00000531625 BICC1Q9H694 974 aaKnown RBP23.96■■□□□ 1.43
UBXN1-212ENST00000531625 CEP290O15078 2479 aa23.96■■□□□ 1.43
UBXN1-212ENST00000531625 SPDYE5A6NIY4 337 aa23.95■■□□□ 1.42
UBXN1-212ENST00000531625 EN2P19622 333 aaPredicted RBP23.95■■□□□ 1.42
UBXN1-212ENST00000531625 FKBP1CQ5VVH2 108 aa23.95■■□□□ 1.42
UBXN1-212ENST00000531625 FAM43AQ8N2R8 423 aa23.95■■□□□ 1.42
UBXN1-212ENST00000531625 VGLL2Q8N8G2 317 aa23.95■■□□□ 1.42
UBXN1-212ENST00000531625 OTUD5Q96G74 571 aa23.95■■□□□ 1.42
UBXN1-212ENST00000531625 ZCCHC17Q9NP64 241 aaKnown RBP23.95■■□□□ 1.42
UBXN1-212ENST00000531625 IQSEC3Q9UPP2 1182 aaPredicted RBP23.95■■□□□ 1.42
UBXN1-212ENST00000531625 FRAT2O75474 233 aaPredicted RBP23.94■■□□□ 1.42
UBXN1-212ENST00000531625 PDE8BO95263 885 aa23.94■■□□□ 1.42
UBXN1-212ENST00000531625 CHAF1AQ13111 956 aaPredicted RBP23.94■■□□□ 1.42
UBXN1-212ENST00000531625 LRRC24Q50LG9 513 aa23.94■■□□□ 1.42
UBXN1-212ENST00000531625 HABP4Q5JVS0 413 aaKnown RBP23.94■■□□□ 1.42
UBXN1-212ENST00000531625 METTL24Q5JXM2 366 aa23.94■■□□□ 1.42
UBXN1-212ENST00000531625 NBPF11Q86T75 865 aa23.94■■□□□ 1.42
UBXN1-212ENST00000531625 FAM83AQ86UY5 434 aa23.94■■□□□ 1.42
UBXN1-212ENST00000531625 ZDHHC15Q96MV8 337 aa23.94■■□□□ 1.42
UBXN1-212ENST00000531625 TMEM106CQ9BVX2 250 aa23.94■■□□□ 1.42
UBXN1-212ENST00000531625 SUGT1Q9Y2Z0 365 aa23.94■■□□□ 1.42
UBXN1-212ENST00000531625 WDHD1O75717 1129 aaPredicted RBP23.93■■□□□ 1.42
UBXN1-212ENST00000531625 ERO1BQ86YB8 467 aa23.93■■□□□ 1.42
UBXN1-212ENST00000531625 ANKRD44Q8N8A2 993 aa23.93■■□□□ 1.42
UBXN1-212ENST00000531625 HOOK2Q96ED9 719 aa23.93■■□□□ 1.42
UBXN1-212ENST00000531625 SNCAIPQ9Y6H5 919 aa23.93■■□□□ 1.42
UBXN1-212ENST00000531625 KIF16BQ96L93 1317 aa23.92■■□□□ 1.42
UBXN1-212ENST00000531625 CETPP11597 493 aa23.92■■□□□ 1.42
UBXN1-212ENST00000531625 CACNB3P54284 484 aa23.92■■□□□ 1.42
UBXN1-212ENST00000531625 SLC9C1Q4G0N8 1177 aa23.92■■□□□ 1.42
UBXN1-212ENST00000531625 TMOD2Q9NZR1 351 aa23.92■■□□□ 1.42
UBXN1-212ENST00000531625 PTCH2Q9Y6C5 1203 aa23.92■■□□□ 1.42
UBXN1-212ENST00000531625 MAST3O60307 1309 aa23.91■■□□□ 1.42
UBXN1-212ENST00000531625 TLR2O60603 784 aa23.91■■□□□ 1.42
UBXN1-212ENST00000531625 APOBEC3HQ6NTF7 200 aaKnown RBP23.91■■□□□ 1.42
UBXN1-212ENST00000531625 WRNIP1Q96S55 665 aa23.91■■□□□ 1.42
UBXN1-212ENST00000531625 BCAMP50895 628 aa23.9■■□□□ 1.42
UBXN1-212ENST00000531625 SNAPC2Q13487 334 aa23.9■■□□□ 1.42
UBXN1-212ENST00000531625 HHIPL2Q6UWX4 724 aa23.9■■□□□ 1.42
UBXN1-212ENST00000531625 RPAP1Q9BWH6 1393 aaPredicted RBP23.9■■□□□ 1.42
UBXN1-212ENST00000531625 HNRNPUQ00839 825 aaKnown RBP eCLIP23.89■■□□□ 1.41
UBXN1-212ENST00000531625 PPIL2Q13356 520 aa23.89■■□□□ 1.41
UBXN1-212ENST00000531625 BTBD19C9JJ37 291 aa23.88■■□□□ 1.41
UBXN1-212ENST00000531625 IRF6O14896 467 aa23.88■■□□□ 1.41
UBXN1-212ENST00000531625 GNRH1P01148 92 aa23.88■■□□□ 1.41
UBXN1-212ENST00000531625 FGFR2P21802 821 aa23.88■■□□□ 1.41
UBXN1-212ENST00000531625 PUM3Q15397 648 aaKnown RBP23.88■■□□□ 1.41
UBXN1-212ENST00000531625 DCAF15Q66K64 600 aa23.88■■□□□ 1.41
UBXN1-212ENST00000531625 MRPL50Q8N5N7 158 aaKnown RBP23.88■■□□□ 1.41
UBXN1-212ENST00000531625 ZKSCAN4Q969J2 545 aaPredicted RBP23.88■■□□□ 1.41
UBXN1-212ENST00000531625 PTPRCP08575 1304 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms