RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 SERPINA10Q9UK55 444 aa22.85■■□□□ 1.25
SCN4B-205ENST00000531550 TTF2Q9UNY4 1162 aaKnown RBP22.85■■□□□ 1.25
SCN4B-205ENST00000531550 F6X3S4 739 aa22.84■■□□□ 1.25
SCN4B-205ENST00000531550 TDRD7Q8NHU6 1098 aaKnown RBP22.84■■□□□ 1.25
SCN4B-205ENST00000531550 TMEM106CQ9BVX2 250 aa22.84■■□□□ 1.25
SCN4B-205ENST00000531550 VGLL4Q14135 290 aa22.83■■□□□ 1.25
SCN4B-205ENST00000531550 TAF1CQ15572 869 aaPredicted RBP22.83■■□□□ 1.25
SCN4B-205ENST00000531550 ZFYVE28Q9HCC9 887 aa22.83■■□□□ 1.25
SCN4B-205ENST00000531550 PTCH2Q9Y6C5 1203 aa22.83■■□□□ 1.25
SCN4B-205ENST00000531550 KIAA0100Q14667 2235 aaKnown RBP22.82■■□□□ 1.24
SCN4B-205ENST00000531550 CCL15-CCL14A0A0B4J2E2 113 aa22.82■■□□□ 1.24
SCN4B-205ENST00000531550 TCP10L2B9ZVM9 353 aa22.82■■□□□ 1.24
SCN4B-205ENST00000531550 VAMP4O75379 141 aa22.82■■□□□ 1.24
SCN4B-205ENST00000531550 GYG1P46976 350 aa22.82■■□□□ 1.24
SCN4B-205ENST00000531550 GTF2A2P52657 109 aa22.82■■□□□ 1.24
SCN4B-205ENST00000531550 CCL15Q16663 113 aa22.82■■□□□ 1.24
SCN4B-205ENST00000531550 SLC9C1Q4G0N8 1177 aa22.82■■□□□ 1.24
SCN4B-205ENST00000531550 DZIP1LQ8IYY4 767 aaKnown RBP22.82■■□□□ 1.24
SCN4B-205ENST00000531550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.82■■□□□ 1.24
SCN4B-205ENST00000531550 TMEM39BQ9GZU3 492 aa22.82■■□□□ 1.24
SCN4B-205ENST00000531550 GRM8O00222 908 aa22.81■■□□□ 1.24
SCN4B-205ENST00000531550 HIBADHP31937 336 aaKnown RBP22.81■■□□□ 1.24
SCN4B-205ENST00000531550 CRKP46108 304 aa22.81■■□□□ 1.24
SCN4B-205ENST00000531550 FXR1P51114 621 aaKnown RBP eCLIP22.81■■□□□ 1.24
SCN4B-205ENST00000531550 UBE4AQ14139 1066 aa22.81■■□□□ 1.24
SCN4B-205ENST00000531550 ARHGEF6Q15052 776 aa22.81■■□□□ 1.24
SCN4B-205ENST00000531550 TNNI2P48788 182 aa22.8■■□□□ 1.24
SCN4B-205ENST00000531550 MAP3K9P80192 1104 aa22.8■■□□□ 1.24
SCN4B-205ENST00000531550 NBPF11Q86T75 865 aa22.8■■□□□ 1.24
SCN4B-205ENST00000531550 FAM43AQ8N2R8 423 aa22.8■■□□□ 1.24
SCN4B-205ENST00000531550 OTUD5Q96G74 571 aa22.8■■□□□ 1.24
SCN4B-205ENST00000531550 CSADQ9Y600 493 aa22.8■■□□□ 1.24
SCN4B-205ENST00000531550 NCBP3Q53F19 620 aaKnown RBP22.79■■□□□ 1.24
SCN4B-205ENST00000531550 FAM84BQ96KN1 310 aaPredicted RBP22.79■■□□□ 1.24
SCN4B-205ENST00000531550 ZSWIM8A7E2V4 1837 aa22.79■■□□□ 1.24
SCN4B-205ENST00000531550 HNRNPUQ00839 825 aaKnown RBP eCLIP22.78■■□□□ 1.24
SCN4B-205ENST00000531550 EXOSC9Q06265 439 aaKnown RBP22.78■■□□□ 1.24
SCN4B-205ENST00000531550 SLC4A8Q2Y0W8 1093 aa22.78■■□□□ 1.24
SCN4B-205ENST00000531550 YTHDC1Q96MU7 727 aaKnown RBP22.78■■□□□ 1.24
SCN4B-205ENST00000531550 SPDYE5A6NIY4 337 aa22.76■■□□□ 1.23
SCN4B-205ENST00000531550 GRIK5Q16478 980 aa22.76■■□□□ 1.23
SCN4B-205ENST00000531550 PUS3Q9BZE2 481 aaKnown RBP22.76■■□□□ 1.23
SCN4B-205ENST00000531550 C9orf78Q9NZ63 289 aaPredicted RBP22.76■■□□□ 1.23
SCN4B-205ENST00000531550 COLQQ9Y215 455 aaPredicted RBP22.76■■□□□ 1.23
SCN4B-205ENST00000531550 SNCAIPQ9Y6H5 919 aa22.76■■□□□ 1.23
SCN4B-205ENST00000531550 MYCP01106 439 aaPredicted RBP22.75■■□□□ 1.23
SCN4B-205ENST00000531550 ARHGAP39Q9C0H5 1083 aa22.75■■□□□ 1.23
SCN4B-205ENST00000531550 TLR2O60603 784 aa22.74■■□□□ 1.23
SCN4B-205ENST00000531550 CACNB3P54284 484 aa22.74■■□□□ 1.23
SCN4B-205ENST00000531550 SH3TC2Q8TF17 1288 aa22.74■■□□□ 1.23
SCN4B-205ENST00000531550 ZCCHC17Q9NP64 241 aaKnown RBP22.74■■□□□ 1.23
SCN4B-205ENST00000531550 IQSEC3Q9UPP2 1182 aaPredicted RBP22.74■■□□□ 1.23
SCN4B-205ENST00000531550 WDHD1O75717 1129 aaPredicted RBP22.73■■□□□ 1.23
SCN4B-205ENST00000531550 ALDH1L1O75891 902 aa22.73■■□□□ 1.23
SCN4B-205ENST00000531550 CETPP11597 493 aa22.73■■□□□ 1.23
SCN4B-205ENST00000531550 LACTBP83111 547 aaPredicted RBP22.73■■□□□ 1.23
SCN4B-205ENST00000531550 HDLBPQ00341 1268 aaKnown RBP22.73■■□□□ 1.23
SCN4B-205ENST00000531550 CHAF1AQ13111 956 aaPredicted RBP22.73■■□□□ 1.23
SCN4B-205ENST00000531550 KIF22Q14807 665 aa22.73■■□□□ 1.23
SCN4B-205ENST00000531550 WDR63Q8IWG1 891 aa22.73■■□□□ 1.23
SCN4B-205ENST00000531550 SUCLG2Q96I99 432 aa22.73■■□□□ 1.23
SCN4B-205ENST00000531550 BTBD19C9JJ37 291 aa22.72■■□□□ 1.23
SCN4B-205ENST00000531550 FBXO33Q7Z6M2 555 aa22.72■■□□□ 1.23
SCN4B-205ENST00000531550 VPS37DQ86XT2 251 aa22.72■■□□□ 1.23
SCN4B-205ENST00000531550 ERO1BQ86YB8 467 aa22.72■■□□□ 1.23
SCN4B-205ENST00000531550 TEKT1Q969V4 418 aa22.72■■□□□ 1.23
SCN4B-205ENST00000531550 WRNIP1Q96S55 665 aa22.72■■□□□ 1.23
SCN4B-205ENST00000531550 RIPOR2Q9Y4F9 1068 aa22.72■■□□□ 1.23
SCN4B-205ENST00000531550 MROH5Q6ZUA9 1318 aa22.72■■□□□ 1.23
SCN4B-205ENST00000531550 SNAPC2Q13487 334 aa22.71■■□□□ 1.23
SCN4B-205ENST00000531550 TBC1D22AQ8WUA7 517 aa22.71■■□□□ 1.23
SCN4B-205ENST00000531550 ZKSCAN4Q969J2 545 aaPredicted RBP22.71■■□□□ 1.23
SCN4B-205ENST00000531550 KAZALD1Q96I82 304 aa22.71■■□□□ 1.23
SCN4B-205ENST00000531550 SALL2Q9Y467 1007 aaPredicted RBP22.71■■□□□ 1.23
SCN4B-205ENST00000531550 ZBED9Q6R2W3 1325 aa22.71■■□□□ 1.23
SCN4B-205ENST00000531550 IRF6O14896 467 aa22.7■■□□□ 1.22
SCN4B-205ENST00000531550 PPIL2Q13356 520 aa22.7■■□□□ 1.22
SCN4B-205ENST00000531550 SLC4A10Q6U841 1118 aa22.7■■□□□ 1.22
SCN4B-205ENST00000531550 SRCIN1Q9C0H9 1055 aa22.7■■□□□ 1.22
SCN4B-205ENST00000531550 TMOD2Q9NZR1 351 aa22.7■■□□□ 1.22
SCN4B-205ENST00000531550 H0YGN5 161 aa22.69■■□□□ 1.22
SCN4B-205ENST00000531550 GNRH1P01148 92 aa22.69■■□□□ 1.22
SCN4B-205ENST00000531550 FAM83AQ86UY5 434 aa22.69■■□□□ 1.22
SCN4B-205ENST00000531550 ZDHHC15Q96MV8 337 aa22.69■■□□□ 1.22
SCN4B-205ENST00000531550 RPAP1Q9BWH6 1393 aaPredicted RBP22.68■■□□□ 1.22
SCN4B-205ENST00000531550 FRAT2O75474 233 aaPredicted RBP22.68■■□□□ 1.22
SCN4B-205ENST00000531550 PRMT2P55345 433 aa22.68■■□□□ 1.22
SCN4B-205ENST00000531550 CAVIN4Q5BKX8 364 aa22.68■■□□□ 1.22
SCN4B-205ENST00000531550 HOOK2Q96ED9 719 aa22.68■■□□□ 1.22
SCN4B-205ENST00000531550 NBPF7P0C2Y1 421 aaPredicted RBP22.67■■□□□ 1.22
SCN4B-205ENST00000531550 LRRC24Q50LG9 513 aa22.67■■□□□ 1.22
SCN4B-205ENST00000531550 METTL24Q5JXM2 366 aa22.67■■□□□ 1.22
SCN4B-205ENST00000531550 FKBP1CQ5VVH2 108 aa22.67■■□□□ 1.22
SCN4B-205ENST00000531550 APOBEC3HQ6NTF7 200 aaKnown RBP22.67■■□□□ 1.22
SCN4B-205ENST00000531550 SPINK5Q9NQ38 1064 aaPredicted RBP22.67■■□□□ 1.22
SCN4B-205ENST00000531550 UTYO14607 1347 aa22.66■■□□□ 1.22
SCN4B-205ENST00000531550 MAST3O60307 1309 aa22.66■■□□□ 1.22
SCN4B-205ENST00000531550 RABL6Q3YEC7 729 aaPredicted RBP22.66■■□□□ 1.22
SCN4B-205ENST00000531550 DCAF15Q66K64 600 aa22.66■■□□□ 1.22
SCN4B-205ENST00000531550 C17orf99Q6UX52 265 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms