RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 NFKBIBQ15653 356 aa7.81□□□□□ -1.16
USP47-211ENST00000531513 CPSF6Q16630 551 aaKnown RBP eCLIP7.81□□□□□ -1.16
USP47-211ENST00000531513 EXOSC6Q5RKV6 272 aaKnown RBP7.81□□□□□ -1.16
USP47-211ENST00000531513 PAOXQ6QHF9 649 aa7.81□□□□□ -1.16
USP47-211ENST00000531513 NRSN2Q9GZP1 204 aa7.81□□□□□ -1.16
USP47-211ENST00000531513 ANGEL1Q9UNK9 670 aaKnown RBP7.81□□□□□ -1.16
USP47-211ENST00000531513 ZBTB7CA1YPR0 619 aa7.8□□□□□ -1.16
USP47-211ENST00000531513 FAM13AO94988 1023 aa7.8□□□□□ -1.16
USP47-211ENST00000531513 GJD3Q8N144 294 aa7.8□□□□□ -1.16
USP47-211ENST00000531513 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
USP47-211ENST00000531513 POLR3DP05423 398 aaPredicted RBP7.79□□□□□ -1.16
USP47-211ENST00000531513 ADMP35318 185 aa7.79□□□□□ -1.16
USP47-211ENST00000531513 SOX4Q06945 474 aaPredicted RBP7.79□□□□□ -1.16
USP47-211ENST00000531513 NFXL1Q6ZNB6 911 aa7.79□□□□□ -1.16
USP47-211ENST00000531513 METTL22Q9BUU2 404 aaPredicted RBP7.79□□□□□ -1.16
USP47-211ENST00000531513 CCDC87Q9NVE4 849 aa7.79□□□□□ -1.16
USP47-211ENST00000531513 CCDC39Q9UFE4 941 aa7.79□□□□□ -1.16
USP47-211ENST00000531513 PRNPP04156 253 aa7.78□□□□□ -1.16
USP47-211ENST00000531513 ADH5P11766 374 aa7.78□□□□□ -1.16
USP47-211ENST00000531513 ZAR1Q86SH2 424 aa7.78□□□□□ -1.16
USP47-211ENST00000531513 VSIG10LQ86VR7 867 aa7.78□□□□□ -1.16
USP47-211ENST00000531513 EZH1Q92800 747 aaPredicted RBP7.78□□□□□ -1.16
USP47-211ENST00000531513 TBC1D32Q96NH3 1257 aa7.78□□□□□ -1.16
USP47-211ENST00000531513 ZFYVE28Q9HCC9 887 aa7.78□□□□□ -1.16
USP47-211ENST00000531513 PRKAG2Q9UGJ0 569 aa7.78□□□□□ -1.16
USP47-211ENST00000531513 CTSBP07858 339 aa7.77□□□□□ -1.17
USP47-211ENST00000531513 PCDH1Q08174 1060 aa7.77□□□□□ -1.17
USP47-211ENST00000531513 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
USP47-211ENST00000531513 SF3B2Q13435 895 aaKnown RBP7.77□□□□□ -1.17
USP47-211ENST00000531513 FZD5Q13467 585 aa7.77□□□□□ -1.17
USP47-211ENST00000531513 YIPF2Q9BWQ6 316 aa7.77□□□□□ -1.17
USP47-211ENST00000531513 A0A096LPE4 126 aa7.76□□□□□ -1.17
USP47-211ENST00000531513 A0A1W2PPZ6 126 aa7.76□□□□□ -1.17
USP47-211ENST00000531513 PHLDB3Q6NSJ2 640 aa7.76□□□□□ -1.17
USP47-211ENST00000531513 GATA6Q92908 595 aa7.76□□□□□ -1.17
USP47-211ENST00000531513 ANO2Q9NQ90 1003 aa7.76□□□□□ -1.17
USP47-211ENST00000531513 ACTL7BQ9Y614 415 aa7.76□□□□□ -1.17
USP47-211ENST00000531513 A0A1W2PP55 124 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 FAM170BA6NMN3 283 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 CYP26A1O43174 497 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 ABL1P00519 1130 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 RAB6AP20340 208 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 MAOBP27338 520 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 GRIA4P48058 902 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 FKBP4Q02790 459 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP47-211ENST00000531513 ZNF423Q2M1K9 1284 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 CCNJLQ8IV13 435 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 TCF12Q99081 682 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 CLEC4MQ9H2X3 399 aaPredicted RBP7.75□□□□□ -1.17
USP47-211ENST00000531513 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 MTMR7Q9Y216 660 aa7.75□□□□□ -1.17
USP47-211ENST00000531513 CARNS1A5YM72 827 aa7.74□□□□□ -1.17
USP47-211ENST00000531513 EIF4EBP3O60516 100 aaPredicted RBP7.74□□□□□ -1.17
USP47-211ENST00000531513 SPRED3Q2MJR0 410 aa7.74□□□□□ -1.17
USP47-211ENST00000531513 CBLL1Q75N03 491 aa7.74□□□□□ -1.17
USP47-211ENST00000531513 NPM2Q86SE8 214 aaKnown RBP7.74□□□□□ -1.17
USP47-211ENST00000531513 FBXL18Q96ME1 805 aa7.74□□□□□ -1.17
USP47-211ENST00000531513 TRAIPQ9BWF2 469 aa7.74□□□□□ -1.17
USP47-211ENST00000531513 NFICP08651 508 aa7.73□□□□□ -1.17
USP47-211ENST00000531513 POU4F3Q15319 338 aa7.73□□□□□ -1.17
USP47-211ENST00000531513 TP53INP2Q8IXH6 220 aa7.73□□□□□ -1.17
USP47-211ENST00000531513 GALNT12Q8IXK2 581 aa7.73□□□□□ -1.17
USP47-211ENST00000531513 BSDC1Q9NW68 430 aaPredicted RBP7.73□□□□□ -1.17
USP47-211ENST00000531513 ECEL1O95672 775 aa7.72□□□□□ -1.17
USP47-211ENST00000531513 CYP11A1P05108 521 aa7.72□□□□□ -1.17
USP47-211ENST00000531513 COL19A1Q14993 1142 aa7.72□□□□□ -1.17
USP47-211ENST00000531513 AKAP4Q5JQC9 854 aa7.72□□□□□ -1.17
USP47-211ENST00000531513 TRIM56Q9BRZ2 755 aaKnown RBP7.72□□□□□ -1.17
USP47-211ENST00000531513 SEMA6CQ9H3T2 930 aa7.72□□□□□ -1.17
USP47-211ENST00000531513 FAM105AQ9NUU6 356 aa7.72□□□□□ -1.17
USP47-211ENST00000531513 AP4E1Q9UPM8 1137 aa7.72□□□□□ -1.17
USP47-211ENST00000531513 CCDC9Q9Y3X0 531 aaKnown RBP7.72□□□□□ -1.17
USP47-211ENST00000531513 MAP7Q14244 749 aa7.71□□□□□ -1.18
USP47-211ENST00000531513 HP1BP3Q5SSJ5 553 aaPredicted RBP7.71□□□□□ -1.18
USP47-211ENST00000531513 USPL1Q5W0Q7 1092 aa7.71□□□□□ -1.18
USP47-211ENST00000531513 ZNF765Q7L2R6 523 aa7.71□□□□□ -1.18
USP47-211ENST00000531513 DYMQ7RTS9 669 aa7.71□□□□□ -1.18
USP47-211ENST00000531513 FLCNQ8NFG4 579 aa7.71□□□□□ -1.18
USP47-211ENST00000531513 LRRC4CQ9HCJ2 640 aa7.71□□□□□ -1.18
USP47-211ENST00000531513 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.7□□□□□ -1.18
USP47-211ENST00000531513 B3GALT4O96024 378 aa7.7□□□□□ -1.18
USP47-211ENST00000531513 ACSS3Q9H6R3 686 aa7.7□□□□□ -1.18
USP47-211ENST00000531513 ZC3H7BQ9UGR2 993 aaKnown RBP7.7□□□□□ -1.18
USP47-211ENST00000531513 DUSP27Q5VZP5 1158 aa7.69□□□□□ -1.18
USP47-211ENST00000531513 CORO1BQ9BR76 489 aa7.69□□□□□ -1.18
USP47-211ENST00000531513 KRTAP4-2Q9BYR5 136 aa7.69□□□□□ -1.18
USP47-211ENST00000531513 ZNF576Q9H609 170 aa7.69□□□□□ -1.18
USP47-211ENST00000531513 PAK6Q9NQU5 681 aaPredicted RBP7.69□□□□□ -1.18
USP47-211ENST00000531513 RAD18Q9NS91 495 aa7.69□□□□□ -1.18
USP47-211ENST00000531513 DYNC1LI2O43237 492 aaPredicted RBP7.68□□□□□ -1.18
USP47-211ENST00000531513 ITGB5P18084 799 aa7.68□□□□□ -1.18
USP47-211ENST00000531513 CYP27A1Q02318 531 aa7.68□□□□□ -1.18
USP47-211ENST00000531513 OGFOD2Q6N063 350 aa7.68□□□□□ -1.18
USP47-211ENST00000531513 GSX1Q9H4S2 264 aaPredicted RBP7.68□□□□□ -1.18
USP47-211ENST00000531513 ZFYVE1Q9HBF4 777 aa7.68□□□□□ -1.18
USP47-211ENST00000531513 ASPAP45381 313 aa7.67□□□□□ -1.18
USP47-211ENST00000531513 KIAA0319Q5VV43 1072 aa7.67□□□□□ -1.18
USP47-211ENST00000531513 SEZ6L2Q6UXD5 910 aa7.67□□□□□ -1.18
USP47-211ENST00000531513 AGBL5Q8NDL9 886 aa7.67□□□□□ -1.18
USP47-211ENST00000531513 C1GALT1Q9NS00 363 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms