RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 HACL1Q9UJ83 578 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 ABT1Q9ULW3 272 aaKnown RBP9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 RNF123Q5XPI4 1314 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 NRXN2Q9P2S2 1712 aa9.25□□□□□ -0.93
TRIM53CP-201ENST00000531490 APBB1O00213 710 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 CCDC184Q52MB2 194 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 MCM10Q7L590 875 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 CCDC116Q8IYX3 515 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 TTC5Q8N0Z6 440 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 GAS2L2Q8NHY3 880 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 MASTLQ96GX5 879 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 AFDNP55196 1824 aaKnown RBP9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 MYBBP1AQ9BQG0 1328 aaKnown RBP9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 WDR33Q9C0J8 1336 aaKnown RBP9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 DLG5Q8TDM6 1919 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 FAM177BA6PVY3 158 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 ST5P78524 1137 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 DZIP3Q86Y13 1208 aaKnown RBP9.24□□□□□ -0.93
TRIM53CP-201ENST00000531490 MRC1P22897 1456 aa9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 PRAMEF22A3QJZ6 481 aa9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 TRAF5O00463 557 aa9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 IL6STP40189 918 aaPredicted RBP9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 FKBP4Q02790 459 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 MLLT1Q03111 559 aaPredicted RBP9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 INTS6LQ5JSJ4 861 aaKnown RBP9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 CYP4F22Q6NT55 531 aa9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 ZNF790Q6PG37 636 aa9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 TRIM47Q96LD4 638 aa9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 SENP2Q9HC62 589 aa9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 ADAMTS8Q9UP79 889 aa9.23□□□□□ -0.93
TRIM53CP-201ENST00000531490 COL11A2P13942 1736 aaPredicted RBP9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 HEG1Q9ULI3 1381 aa9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 AOC2O75106 756 aa9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 MAP2K1Q02750 393 aaPredicted RBP9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 TEFQ10587 303 aa9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 PPP1R26Q5T8A7 1209 aaPredicted RBP9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 SOGA3Q5TF21 947 aa9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 NBPF5PQ86XG9 351 aaPredicted RBP9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 SYNE4Q8N205 404 aa9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 CAPNS2Q96L46 248 aa9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 DDX21Q9NR30 783 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 USP16Q9Y5T5 823 aa9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 GJA3Q9Y6H8 435 aa9.22□□□□□ -0.93
TRIM53CP-201ENST00000531490 DLEC1Q9Y238 1755 aa9.21□□□□□ -0.93
TRIM53CP-201ENST00000531490 CEMIPQ8WUJ3 1361 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 FZD9O00144 591 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 NPR1P16066 1061 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 NR1H3Q13133 447 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 NBPF20Q3BBV1 942 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 MRPL14Q6P1L8 145 aaKnown RBP9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 CCDC146Q8IYE0 955 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 ZNF775Q96BV0 537 aaPredicted RBP9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 THUMPD2Q9BTF0 503 aaKnown RBP9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 MIS18AQ9NYP9 233 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 ANKRD31Q8N7Z5 1873 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 SLX4Q8IY92 1834 aa9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 SIPA1L3O60292 1781 aaPredicted RBP9.21□□□□□ -0.94
TRIM53CP-201ENST00000531490 IARSP41252 1262 aaKnown RBP9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 EPS15P42566 896 aa9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 RGS19P49795 217 aa9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 CST9Q5W186 159 aa9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 PNMA8AQ86V59 439 aaPredicted RBP9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 RTF1Q92541 710 aaKnown RBP9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 KIFC2Q96AC6 838 aa9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 ZFP42Q96MM3 310 aa9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 GPR101Q96P66 508 aaPredicted RBP9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 FMNL2Q96PY5 1086 aa9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 PCDHB9Q9Y5E1 797 aa9.2□□□□□ -0.94
TRIM53CP-201ENST00000531490 KLRG2A4D1S0 409 aaPredicted RBP9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 BTBD11A6QL63 1104 aa9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 ESPNB1AK53 854 aa9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 HTATSF1O43719 755 aaKnown RBP9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 MCM6Q14566 821 aa9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 NFE2L2Q16236 605 aa9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 NPM2Q86SE8 214 aaKnown RBP9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 GPC2Q8N158 579 aa9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 TEX13AQ9BXU3 409 aaPredicted RBP9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 MCOLN1Q9GZU1 580 aa9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 NIP7Q9Y221 180 aaKnown RBP eCLIP9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 RRP7AQ9Y3A4 280 aaKnown RBP9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 FER1L6Q2WGJ9 1857 aa9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 CCDC88AQ3V6T2 1871 aa9.19□□□□□ -0.94
TRIM53CP-201ENST00000531490 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 TMPOP42166 694 aaKnown RBP9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 SCNN1DP51172 638 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 RIPK4P57078 832 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 RAB15P59190 212 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 DHX9Q08211 1270 aaKnown RBP9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 HLFQ16534 295 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 TMEM132AQ24JP5 1023 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 NBPF10Q6P3W6 841 aaKnown RBP9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 RTKN2Q8IZC4 609 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 MEIOBQ8N635 442 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 PURBQ96QR8 312 aaKnown RBP9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
TRIM53CP-201ENST00000531490 COL4A5P29400 1685 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms