RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ADH5P11766 374 aa9.73□□□□□ -0.85
PTPRK-220ENST00000531466 NPR3P17342 541 aa9.73□□□□□ -0.85
PTPRK-220ENST00000531466 USP5P45974 858 aa9.73□□□□□ -0.85
PTPRK-220ENST00000531466 EZH1Q92800 747 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-220ENST00000531466 FBXL18Q96ME1 805 aa9.73□□□□□ -0.85
PTPRK-220ENST00000531466 FAM13AO94988 1023 aa9.72□□□□□ -0.85
PTPRK-220ENST00000531466 RAB6AP20340 208 aa9.72□□□□□ -0.85
PTPRK-220ENST00000531466 ZFYVE28Q9HCC9 887 aa9.72□□□□□ -0.85
PTPRK-220ENST00000531466 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
PTPRK-220ENST00000531466 ACTL7BQ9Y614 415 aa9.72□□□□□ -0.85
PTPRK-220ENST00000531466 ARID3CA6NKF2 412 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 TMEM88BA6NKF7 163 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 CTSBP07858 339 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 NFICP08651 508 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 MAOBP27338 520 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 CBLL1Q75N03 491 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 GATA6Q92908 595 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 LRRC4CQ9HCJ2 640 aa9.71□□□□□ -0.86
PTPRK-220ENST00000531466 BSDC1Q9NW68 430 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-220ENST00000531466 A0A096LPE4 126 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 A0A1W2PPZ6 126 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 FZD5Q13467 585 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 COL19A1Q14993 1142 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 ZNF423Q2M1K9 1284 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 SPRED3Q2MJR0 410 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 GJD3Q8N144 294 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 FLCNQ8NFG4 579 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
PTPRK-220ENST00000531466 AKAP4Q5JQC9 854 aa9.69□□□□□ -0.86
PTPRK-220ENST00000531466 OGFOD2Q6N063 350 aa9.69□□□□□ -0.86
PTPRK-220ENST00000531466 DYMQ7RTS9 669 aa9.69□□□□□ -0.86
PTPRK-220ENST00000531466 CLEC4MQ9H2X3 399 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-220ENST00000531466 A0A1W2PP55 124 aa9.68□□□□□ -0.86
PTPRK-220ENST00000531466 GRIA4P48058 902 aa9.68□□□□□ -0.86
PTPRK-220ENST00000531466 POU4F3Q15319 338 aa9.68□□□□□ -0.86
PTPRK-220ENST00000531466 DUSP27Q5VZP5 1158 aa9.68□□□□□ -0.86
PTPRK-220ENST00000531466 CCNJLQ8IV13 435 aa9.68□□□□□ -0.86
PTPRK-220ENST00000531466 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-220ENST00000531466 ABL1P00519 1130 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 CYP11A1P05108 521 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 ZNF211Q13398 564 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-220ENST00000531466 MAP7Q14244 749 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 ZNF765Q7L2R6 523 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 TCF12Q99081 682 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 SEMA6CQ9H3T2 930 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 LIN7BQ9HAP6 207 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 PAK6Q9NQU5 681 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-220ENST00000531466 FAM105AQ9NUU6 356 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 ZC3H7BQ9UGR2 993 aaKnown RBP9.67□□□□□ -0.86
PTPRK-220ENST00000531466 AP4E1Q9UPM8 1137 aa9.67□□□□□ -0.86
PTPRK-220ENST00000531466 ECEL1O95672 775 aa9.66□□□□□ -0.86
PTPRK-220ENST00000531466 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTPRK-220ENST00000531466 SF3B2Q13435 895 aaKnown RBP9.66□□□□□ -0.86
PTPRK-220ENST00000531466 RAD18Q9NS91 495 aa9.66□□□□□ -0.86
PTPRK-220ENST00000531466 ASIC4Q96FT7 647 aa9.65□□□□□ -0.86
PTPRK-220ENST00000531466 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
PTPRK-220ENST00000531466 CARNS1A5YM72 827 aa9.64□□□□□ -0.87
PTPRK-220ENST00000531466 ITGB5P18084 799 aa9.64□□□□□ -0.87
PTPRK-220ENST00000531466 PHLDB3Q6NSJ2 640 aa9.64□□□□□ -0.87
PTPRK-220ENST00000531466 GALNT12Q8IXK2 581 aa9.64□□□□□ -0.87
PTPRK-220ENST00000531466 TRIM56Q9BRZ2 755 aaKnown RBP9.64□□□□□ -0.87
PTPRK-220ENST00000531466 ACSS3Q9H6R3 686 aa9.64□□□□□ -0.87
PTPRK-220ENST00000531466 DYNC1LI2O43237 492 aaPredicted RBP9.63□□□□□ -0.87
PTPRK-220ENST00000531466 ASPAP45381 313 aa9.63□□□□□ -0.87
PTPRK-220ENST00000531466 CYP27A1Q02318 531 aa9.63□□□□□ -0.87
PTPRK-220ENST00000531466 HP1BP3Q5SSJ5 553 aaPredicted RBP9.63□□□□□ -0.87
PTPRK-220ENST00000531466 AGBL5Q8NDL9 886 aa9.63□□□□□ -0.87
PTPRK-220ENST00000531466 CORO1BQ9BR76 489 aa9.63□□□□□ -0.87
PTPRK-220ENST00000531466 LGR6Q9HBX8 967 aa9.63□□□□□ -0.87
PTPRK-220ENST00000531466 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.62□□□□□ -0.87
PTPRK-220ENST00000531466 USPL1Q5W0Q7 1092 aa9.62□□□□□ -0.87
PTPRK-220ENST00000531466 DAGLAQ9Y4D2 1042 aa9.62□□□□□ -0.87
PTPRK-220ENST00000531466 B3GALT4O96024 378 aa9.6□□□□□ -0.87
PTPRK-220ENST00000531466 C8AP07357 584 aa9.6□□□□□ -0.87
PTPRK-220ENST00000531466 JUNBP17275 347 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-220ENST00000531466 JAG1P78504 1218 aa9.6□□□□□ -0.87
PTPRK-220ENST00000531466 ZNF574Q6ZN55 896 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-220ENST00000531466 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
PTPRK-220ENST00000531466 ZFYVE1Q9HBF4 777 aa9.6□□□□□ -0.87
PTPRK-220ENST00000531466 C1GALT1Q9NS00 363 aa9.6□□□□□ -0.87
PTPRK-220ENST00000531466 PDE3AQ14432 1141 aa9.59□□□□□ -0.87
PTPRK-220ENST00000531466 SEZ6L2Q6UXD5 910 aa9.59□□□□□ -0.87
PTPRK-220ENST00000531466 POU5F2Q8N7G0 328 aa9.59□□□□□ -0.87
PTPRK-220ENST00000531466 DDX54Q8TDD1 881 aaKnown RBP9.59□□□□□ -0.87
PTPRK-220ENST00000531466 ZNF576Q9H609 170 aa9.59□□□□□ -0.87
PTPRK-220ENST00000531466 AOC2O75106 756 aa9.58□□□□□ -0.88
PTPRK-220ENST00000531466 LCE1DQ5T752 114 aa9.58□□□□□ -0.88
PTPRK-220ENST00000531466 BCL7CQ8WUZ0 217 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-220ENST00000531466 GSX1Q9H4S2 264 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-220ENST00000531466 PPP1R9AQ9ULJ8 1098 aa9.58□□□□□ -0.88
PTPRK-220ENST00000531466 WDR18Q9BV38 432 aa9.57□□□□□ -0.88
PTPRK-220ENST00000531466 EHD4Q9H223 541 aa9.57□□□□□ -0.88
PTPRK-220ENST00000531466 SLC5A6Q9Y289 635 aa9.57□□□□□ -0.88
PTPRK-220ENST00000531466 PPP1R15AO75807 674 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-220ENST00000531466 PLCL1Q15111 1095 aa9.56□□□□□ -0.88
PTPRK-220ENST00000531466 KIAA0319Q5VV43 1072 aa9.56□□□□□ -0.88
PTPRK-220ENST00000531466 OGFOD3Q6PK18 319 aa9.56□□□□□ -0.88
PTPRK-220ENST00000531466 BRPF3Q9ULD4 1205 aa9.56□□□□□ -0.88
PTPRK-220ENST00000531466 PAPLNO95428 1278 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms