RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 SERPINA10Q9UK55 444 aa26.73■■□□□ 1.87
CHKA-206ENST00000531341 OTOFQ9HC10 1997 aa26.72■■□□□ 1.87
CHKA-206ENST00000531341 GRM8O00222 908 aa26.72■■□□□ 1.87
CHKA-206ENST00000531341 HIBADHP31937 336 aaKnown RBP26.71■■□□□ 1.87
CHKA-206ENST00000531341 CRKP46108 304 aa26.7■■□□□ 1.86
CHKA-206ENST00000531341 VGLL4Q14135 290 aa26.7■■□□□ 1.86
CHKA-206ENST00000531341 UBE4AQ14139 1066 aa26.7■■□□□ 1.86
CHKA-206ENST00000531341 NCBP3Q53F19 620 aaKnown RBP26.7■■□□□ 1.86
CHKA-206ENST00000531341 KAZALD1Q96I82 304 aa26.7■■□□□ 1.86
CHKA-206ENST00000531341 TNFAIP1Q13829 316 aa26.69■■□□□ 1.86
CHKA-206ENST00000531341 FAM43AQ8N2R8 423 aa26.69■■□□□ 1.86
CHKA-206ENST00000531341 SUCLG2Q96I99 432 aa26.69■■□□□ 1.86
CHKA-206ENST00000531341 CCL15-CCL14A0A0B4J2E2 113 aa26.68■■□□□ 1.86
CHKA-206ENST00000531341 MAP3K9P80192 1104 aa26.68■■□□□ 1.86
CHKA-206ENST00000531341 CCL15Q16663 113 aa26.68■■□□□ 1.86
CHKA-206ENST00000531341 WDR63Q8IWG1 891 aa26.68■■□□□ 1.86
CHKA-206ENST00000531341 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.68■■□□□ 1.86
CHKA-206ENST00000531341 ZNF333Q96JL9 665 aa26.68■■□□□ 1.86
CHKA-206ENST00000531341 IQSEC3Q9UPP2 1182 aaPredicted RBP26.68■■□□□ 1.86
CHKA-206ENST00000531341 CACNB3P54284 484 aa26.67■■□□□ 1.86
CHKA-206ENST00000531341 C9orf78Q9NZ63 289 aaPredicted RBP26.67■■□□□ 1.86
CHKA-206ENST00000531341 RIPOR2Q9Y4F9 1068 aa26.67■■□□□ 1.86
CHKA-206ENST00000531341 PTCH2Q9Y6C5 1203 aa26.67■■□□□ 1.86
CHKA-206ENST00000531341 RBBP6Q7Z6E9 1792 aaKnown RBP26.66■■□□□ 1.86
CHKA-206ENST00000531341 TAF1CQ15572 869 aaPredicted RBP26.66■■□□□ 1.86
CHKA-206ENST00000531341 OTUD5Q96G74 571 aa26.66■■□□□ 1.86
CHKA-206ENST00000531341 SLC4A10Q6U841 1118 aa26.65■■□□□ 1.86
CHKA-206ENST00000531341 ZFYVE28Q9HCC9 887 aa26.65■■□□□ 1.86
CHKA-206ENST00000531341 CACNA1FO60840 1977 aa26.65■■□□□ 1.86
CHKA-206ENST00000531341 KIAA0100Q14667 2235 aaKnown RBP26.65■■□□□ 1.86
CHKA-206ENST00000531341 GTF2A2P52657 109 aa26.64■■□□□ 1.86
CHKA-206ENST00000531341 FBXO33Q7Z6M2 555 aa26.64■■□□□ 1.86
CHKA-206ENST00000531341 MYCP01106 439 aaPredicted RBP26.63■■□□□ 1.85
CHKA-206ENST00000531341 NBPF7P0C2Y1 421 aaPredicted RBP26.63■■□□□ 1.85
CHKA-206ENST00000531341 CHAF1AQ13111 956 aaPredicted RBP26.63■■□□□ 1.85
CHKA-206ENST00000531341 ARHGAP39Q9C0H5 1083 aa26.63■■□□□ 1.85
CHKA-206ENST00000531341 ALDH1L1O75891 902 aa26.62■■□□□ 1.85
CHKA-206ENST00000531341 TNNI2P48788 182 aa26.62■■□□□ 1.85
CHKA-206ENST00000531341 LRRC24Q50LG9 513 aa26.62■■□□□ 1.85
CHKA-206ENST00000531341 TMEM106CQ9BVX2 250 aa26.62■■□□□ 1.85
CHKA-206ENST00000531341 SRCIN1Q9C0H9 1055 aa26.62■■□□□ 1.85
CHKA-206ENST00000531341 CSADQ9Y600 493 aa26.62■■□□□ 1.85
CHKA-206ENST00000531341 SNCAIPQ9Y6H5 919 aa26.62■■□□□ 1.85
CHKA-206ENST00000531341 SLC9C1Q4G0N8 1177 aa26.61■■□□□ 1.85
CHKA-206ENST00000531341 ZKSCAN4Q969J2 545 aaPredicted RBP26.61■■□□□ 1.85
CHKA-206ENST00000531341 SZT2Q5T011 3432 aa26.61■■□□□ 1.85
CHKA-206ENST00000531341 SPDYE5A6NIY4 337 aa26.6■■□□□ 1.85
CHKA-206ENST00000531341 MRS2Q9HD23 443 aa26.6■■□□□ 1.85
CHKA-206ENST00000531341 ARAP2Q8WZ64 1704 aa26.59■■□□□ 1.85
CHKA-206ENST00000531341 BTBD19C9JJ37 291 aa26.59■■□□□ 1.85
CHKA-206ENST00000531341 FXR1P51114 621 aaKnown RBP eCLIP26.59■■□□□ 1.85
CHKA-206ENST00000531341 SH3TC2Q8TF17 1288 aa26.59■■□□□ 1.85
CHKA-206ENST00000531341 BICC1Q9H694 974 aaKnown RBP26.59■■□□□ 1.85
CHKA-206ENST00000531341 MROH5Q6ZUA9 1318 aa26.59■■□□□ 1.85
CHKA-206ENST00000531341 ZSWIM8A7E2V4 1837 aa26.58■■□□□ 1.85
CHKA-206ENST00000531341 NBPF11Q86T75 865 aa26.58■■□□□ 1.85
CHKA-206ENST00000531341 VPS37DQ86XT2 251 aa26.58■■□□□ 1.85
CHKA-206ENST00000531341 IRF6O14896 467 aa26.57■■□□□ 1.84
CHKA-206ENST00000531341 TLR2O60603 784 aa26.57■■□□□ 1.84
CHKA-206ENST00000531341 ECM2O94769 699 aaPredicted RBP26.57■■□□□ 1.84
CHKA-206ENST00000531341 BCAMP50895 628 aa26.57■■□□□ 1.84
CHKA-206ENST00000531341 HDLBPQ00341 1268 aaKnown RBP26.57■■□□□ 1.84
CHKA-206ENST00000531341 SLC4A8Q2Y0W8 1093 aa26.57■■□□□ 1.84
CHKA-206ENST00000531341 APOBEC3HQ6NTF7 200 aaKnown RBP26.57■■□□□ 1.84
CHKA-206ENST00000531341 VGLL2Q8N8G2 317 aa26.57■■□□□ 1.84
CHKA-206ENST00000531341 WRNIP1Q96S55 665 aa26.57■■□□□ 1.84
CHKA-206ENST00000531341 COLQQ9Y215 455 aaPredicted RBP26.57■■□□□ 1.84
CHKA-206ENST00000531341 UTYO14607 1347 aa26.57■■□□□ 1.84
CHKA-206ENST00000531341 ARHGEF6Q15052 776 aa26.56■■□□□ 1.84
CHKA-206ENST00000531341 RABL6Q3YEC7 729 aaPredicted RBP26.56■■□□□ 1.84
CHKA-206ENST00000531341 ANKRD44Q8N8A2 993 aa26.56■■□□□ 1.84
CHKA-206ENST00000531341 KLHDC4Q8TBB5 520 aa26.56■■□□□ 1.84
CHKA-206ENST00000531341 TEKT1Q969V4 418 aa26.56■■□□□ 1.84
CHKA-206ENST00000531341 FRAT2O75474 233 aaPredicted RBP26.55■■□□□ 1.84
CHKA-206ENST00000531341 LACTBP83111 547 aaPredicted RBP26.55■■□□□ 1.84
CHKA-206ENST00000531341 METTL24Q5JXM2 366 aa26.55■■□□□ 1.84
CHKA-206ENST00000531341 ERO1BQ86YB8 467 aa26.55■■□□□ 1.84
CHKA-206ENST00000531341 ZDHHC15Q96MV8 337 aa26.55■■□□□ 1.84
CHKA-206ENST00000531341 CETPP11597 493 aa26.54■■□□□ 1.84
CHKA-206ENST00000531341 CTGFP29279 349 aa26.54■■□□□ 1.84
CHKA-206ENST00000531341 CAVIN4Q5BKX8 364 aa26.54■■□□□ 1.84
CHKA-206ENST00000531341 TBC1D22AQ8WUA7 517 aa26.54■■□□□ 1.84
CHKA-206ENST00000531341 PDE8BO95263 885 aa26.53■■□□□ 1.84
CHKA-206ENST00000531341 MIGA2Q7L4E1 593 aa26.53■■□□□ 1.84
CHKA-206ENST00000531341 FAM83AQ86UY5 434 aa26.53■■□□□ 1.84
CHKA-206ENST00000531341 RANBP2P49792 3224 aaKnown RBP26.52■■□□□ 1.84
CHKA-206ENST00000531341 SNAPC2Q13487 334 aa26.52■■□□□ 1.84
CHKA-206ENST00000531341 MRIQ9BWK5 157 aa26.52■■□□□ 1.84
CHKA-206ENST00000531341 INPP5BP32019 993 aa26.51■■□□□ 1.83
CHKA-206ENST00000531341 PPIL2Q13356 520 aa26.51■■□□□ 1.83
CHKA-206ENST00000531341 C17orf99Q6UX52 265 aa26.5■■□□□ 1.83
CHKA-206ENST00000531341 ZCCHC17Q9NP64 241 aaKnown RBP26.5■■□□□ 1.83
CHKA-206ENST00000531341 H0YGN5 161 aa26.49■■□□□ 1.83
CHKA-206ENST00000531341 FGFR2P21802 821 aa26.49■■□□□ 1.83
CHKA-206ENST00000531341 KIF22Q14807 665 aa26.49■■□□□ 1.83
CHKA-206ENST00000531341 MTFR1Q15390 333 aa26.49■■□□□ 1.83
CHKA-206ENST00000531341 FKBP1CQ5VVH2 108 aa26.49■■□□□ 1.83
CHKA-206ENST00000531341 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.49■■□□□ 1.83
CHKA-206ENST00000531341 TMOD2Q9NZR1 351 aa26.49■■□□□ 1.83
CHKA-206ENST00000531341 CPA4Q9UI42 421 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms