RNA–Protein interactions for RNA: ENST00000531318.1

NFRKB-208, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 4

Gene NFRKB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-208ENST00000531318 DOCK3Q8IZD9 2030 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 MGAMO43451 1857 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 CCL15-CCL14A0A0B4J2E2 113 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 TCP10L2B9ZVM9 353 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 CCL15Q16663 113 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 SLC9C1Q4G0N8 1177 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 CDAN1Q8IWY9 1227 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 TDRD3Q9H7E2 651 aaKnown RBP9.39□□□□□ -0.91
NFRKB-208ENST00000531318 CNNM1Q9NRU3 951 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 TTF2Q9UNY4 1162 aaKnown RBP9.39□□□□□ -0.91
NFRKB-208ENST00000531318 PTCH2Q9Y6C5 1203 aa9.39□□□□□ -0.91
NFRKB-208ENST00000531318 IRS2Q9Y4H2 1338 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 F6X3S4 739 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 IL1R1P14778 569 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 TNFAIP1Q13829 316 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 MFSD14BQ5SR56 506 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 LMBR1LQ6UX01 489 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 LDHAL6AQ6ZMR3 332 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 LINS1Q8NG48 757 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 ARMC5Q96C12 935 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 OTUD5Q96G74 571 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 ZFYVE28Q9HCC9 887 aa9.38□□□□□ -0.91
NFRKB-208ENST00000531318 ZNF70Q9UC06 446 aaPredicted RBP9.38□□□□□ -0.91
NFRKB-208ENST00000531318 SALL2Q9Y467 1007 aaPredicted RBP9.38□□□□□ -0.91
NFRKB-208ENST00000531318 GYG1P46976 350 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 FXR1P51114 621 aaKnown RBP eCLIP9.37□□□□□ -0.91
NFRKB-208ENST00000531318 FKBP1AP62942 108 aaKnown RBP9.37□□□□□ -0.91
NFRKB-208ENST00000531318 FOXO4P98177 505 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 CHAF1AQ13111 956 aaPredicted RBP9.37□□□□□ -0.91
NFRKB-208ENST00000531318 CCDC57Q2TAC2 916 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 NBPF11Q86T75 865 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 SH3TC2Q8TF17 1288 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 BRI3BPQ8WY22 251 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 ZNF333Q96JL9 665 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 TMEM39BQ9GZU3 492 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 IQSEC3Q9UPP2 1182 aaPredicted RBP9.37□□□□□ -0.91
NFRKB-208ENST00000531318 COLQQ9Y215 455 aaPredicted RBP9.37□□□□□ -0.91
NFRKB-208ENST00000531318 CSADQ9Y600 493 aa9.37□□□□□ -0.91
NFRKB-208ENST00000531318 RANBP2P49792 3224 aaKnown RBP9.37□□□□□ -0.91
NFRKB-208ENST00000531318 TESPA1A2RU30 521 aaPredicted RBP9.36□□□□□ -0.91
NFRKB-208ENST00000531318 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 TNNI2P48788 182 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 GTF2A2P52657 109 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 CACNB3P54284 484 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 VGLL4Q14135 290 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 ARHGEF6Q15052 776 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 EPHA10Q5JZY3 1008 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.36□□□□□ -0.91
NFRKB-208ENST00000531318 C15orf52Q6ZUT6 534 aaKnown RBP9.36□□□□□ -0.91
NFRKB-208ENST00000531318 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 DZIP1LQ8IYY4 767 aaKnown RBP9.36□□□□□ -0.91
NFRKB-208ENST00000531318 FAM43AQ8N2R8 423 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 MS4A4AQ96JQ5 239 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 ARHGAP39Q9C0H5 1083 aa9.36□□□□□ -0.91
NFRKB-208ENST00000531318 CUL9Q8IWT3 2517 aa9.35□□□□□ -0.91
NFRKB-208ENST00000531318 FRAT2O75474 233 aaPredicted RBP9.35□□□□□ -0.91
NFRKB-208ENST00000531318 WDHD1O75717 1129 aaPredicted RBP9.35□□□□□ -0.91
NFRKB-208ENST00000531318 HIBADHP31937 336 aaKnown RBP9.35□□□□□ -0.91
NFRKB-208ENST00000531318 CRKP46108 304 aa9.35□□□□□ -0.91
NFRKB-208ENST00000531318 KIF22Q14807 665 aa9.35□□□□□ -0.91
NFRKB-208ENST00000531318 VPS37DQ86XT2 251 aa9.35□□□□□ -0.91
NFRKB-208ENST00000531318 PUS3Q9BZE2 481 aaKnown RBP9.35□□□□□ -0.91
NFRKB-208ENST00000531318 C9orf78Q9NZ63 289 aaPredicted RBP9.35□□□□□ -0.91
NFRKB-208ENST00000531318 MYH2Q9UKX2 1941 aa9.35□□□□□ -0.91
NFRKB-208ENST00000531318 FAM205AQ6ZU69 1335 aa9.34□□□□□ -0.91
NFRKB-208ENST00000531318 FANCIQ9NVI1 1328 aa9.34□□□□□ -0.91
NFRKB-208ENST00000531318 H0YGN5 161 aa9.34□□□□□ -0.91
NFRKB-208ENST00000531318 GRIK5Q16478 980 aa9.34□□□□□ -0.91
NFRKB-208ENST00000531318 CCDC184Q52MB2 194 aa9.34□□□□□ -0.91
NFRKB-208ENST00000531318 SLC4A10Q6U841 1118 aa9.34□□□□□ -0.91
NFRKB-208ENST00000531318 TDRD7Q8NHU6 1098 aaKnown RBP9.34□□□□□ -0.91
NFRKB-208ENST00000531318 ZKSCAN4Q969J2 545 aaPredicted RBP9.34□□□□□ -0.91
NFRKB-208ENST00000531318 TEPSINQ96N21 525 aa9.34□□□□□ -0.91
NFRKB-208ENST00000531318 SERPINA10Q9UK55 444 aa9.34□□□□□ -0.91
NFRKB-208ENST00000531318 BTBD19C9JJ37 291 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 GRM8O00222 908 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 VAMP4O75379 141 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 EXOSC9Q06265 439 aaKnown RBP9.33□□□□□ -0.92
NFRKB-208ENST00000531318 UBE4AQ14139 1066 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 BEND3Q5T5X7 828 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 PIP4P2Q8N4L2 257 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 SPDYE1Q8NFV5 336 aaPredicted RBP9.33□□□□□ -0.92
NFRKB-208ENST00000531318 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.33□□□□□ -0.92
NFRKB-208ENST00000531318 DPF3Q92784 378 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 FAM84BQ96KN1 310 aaPredicted RBP9.33□□□□□ -0.92
NFRKB-208ENST00000531318 WRNIP1Q96S55 665 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 TMOD2Q9NZR1 351 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 PTPRFP10586 1907 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 A0A0C4DFX4 3053 aa9.33□□□□□ -0.92
NFRKB-208ENST00000531318 SPDYE5A6NIY4 337 aa9.32□□□□□ -0.92
NFRKB-208ENST00000531318 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
NFRKB-208ENST00000531318 TLR2O60603 784 aa9.32□□□□□ -0.92
NFRKB-208ENST00000531318 CETPP11597 493 aa9.32□□□□□ -0.92
NFRKB-208ENST00000531318 LACTBP83111 547 aaPredicted RBP9.32□□□□□ -0.92
NFRKB-208ENST00000531318 MTFR1Q15390 333 aa9.32□□□□□ -0.92
NFRKB-208ENST00000531318 CCDC27Q2M243 656 aa9.32□□□□□ -0.92
NFRKB-208ENST00000531318 SUCLG2Q96I99 432 aa9.32□□□□□ -0.92
NFRKB-208ENST00000531318 BIN2Q9UBW5 565 aaPredicted RBP9.32□□□□□ -0.92
NFRKB-208ENST00000531318 CPA4Q9UI42 421 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 261.9 ms