RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SEC62Q99442 399 aaKnown RBP22.98■■□□□ 1.27
SMPD1-205ENST00000531303 RFX7Q2KHR2 1363 aa22.97■■□□□ 1.27
SMPD1-205ENST00000531303 ZNF646O15015 1829 aaPredicted RBP22.97■■□□□ 1.27
SMPD1-205ENST00000531303 EIF6P56537 245 aaKnown RBP22.96■■□□□ 1.27
SMPD1-205ENST00000531303 C9orf131Q5VYM1 1079 aa22.96■■□□□ 1.27
SMPD1-205ENST00000531303 CIAPIN1Q6FI81 312 aa22.96■■□□□ 1.27
SMPD1-205ENST00000531303 KIAA0825Q8IV33 1275 aa22.96■■□□□ 1.27
SMPD1-205ENST00000531303 ZNF384Q8TF68 577 aa22.96■■□□□ 1.27
SMPD1-205ENST00000531303 RUFY2Q8WXA3 655 aa22.96■■□□□ 1.27
SMPD1-205ENST00000531303 NSUN4Q96CB9 384 aaKnown RBP22.96■■□□□ 1.27
SMPD1-205ENST00000531303 ESYT1Q9BSJ8 1104 aa22.96■■□□□ 1.27
SMPD1-205ENST00000531303 TTF2Q9UNY4 1162 aaKnown RBP22.96■■□□□ 1.27
SMPD1-205ENST00000531303 TCRBV5S4A2TA0A5A2 114 aa22.95■■□□□ 1.26
SMPD1-205ENST00000531303 UBE3CQ15386 1083 aa22.95■■□□□ 1.26
SMPD1-205ENST00000531303 DIXDC1Q155Q3 683 aa22.95■■□□□ 1.26
SMPD1-205ENST00000531303 ZMYM1Q5SVZ6 1142 aa22.95■■□□□ 1.26
SMPD1-205ENST00000531303 CCDC129Q6ZRS4 1044 aa22.95■■□□□ 1.26
SMPD1-205ENST00000531303 IL25Q9H293 177 aa22.95■■□□□ 1.26
SMPD1-205ENST00000531303 ZBTB12Q9Y330 459 aaPredicted RBP22.95■■□□□ 1.26
SMPD1-205ENST00000531303 MYH2Q9UKX2 1941 aa22.95■■□□□ 1.26
SMPD1-205ENST00000531303 SEC24BO95487 1268 aa22.94■■□□□ 1.26
SMPD1-205ENST00000531303 VIL1P09327 827 aaKnown RBP22.94■■□□□ 1.26
SMPD1-205ENST00000531303 SCNN1DP51172 638 aa22.94■■□□□ 1.26
SMPD1-205ENST00000531303 RSBN1LQ6PCB5 846 aaPredicted RBP22.94■■□□□ 1.26
SMPD1-205ENST00000531303 APPBP2Q92624 585 aa22.94■■□□□ 1.26
SMPD1-205ENST00000531303 OSBP2Q969R2 916 aa22.94■■□□□ 1.26
SMPD1-205ENST00000531303 BACH2Q9BYV9 841 aa22.94■■□□□ 1.26
SMPD1-205ENST00000531303 GJA3Q9Y6H8 435 aa22.94■■□□□ 1.26
SMPD1-205ENST00000531303 M0R2C6 588 aa22.93■■□□□ 1.26
SMPD1-205ENST00000531303 FZD9O00144 591 aa22.93■■□□□ 1.26
SMPD1-205ENST00000531303 FKBP1AP62942 108 aaKnown RBP22.93■■□□□ 1.26
SMPD1-205ENST00000531303 TNIP1Q15025 636 aa22.93■■□□□ 1.26
SMPD1-205ENST00000531303 ADGRA1Q86SQ6 560 aa22.93■■□□□ 1.26
SMPD1-205ENST00000531303 MIGA1Q8NAN2 632 aa22.93■■□□□ 1.26
SMPD1-205ENST00000531303 PUS7LQ9H0K6 701 aaKnown RBP22.93■■□□□ 1.26
SMPD1-205ENST00000531303 MAST2Q6P0Q8 1798 aa22.93■■□□□ 1.26
SMPD1-205ENST00000531303 MFAP1P55081 439 aaKnown RBP22.92■■□□□ 1.26
SMPD1-205ENST00000531303 GSTO1P78417 241 aa22.92■■□□□ 1.26
SMPD1-205ENST00000531303 MCMDC2Q4G0Z9 681 aa22.92■■□□□ 1.26
SMPD1-205ENST00000531303 TICAM2Q86XR7 235 aa22.92■■□□□ 1.26
SMPD1-205ENST00000531303 ZNF541Q9H0D2 1346 aa22.92■■□□□ 1.26
SMPD1-205ENST00000531303 HELLSQ9NRZ9 838 aa22.92■■□□□ 1.26
SMPD1-205ENST00000531303 SUGT1Q9Y2Z0 365 aa22.92■■□□□ 1.26
SMPD1-205ENST00000531303 MAST3O60307 1309 aa22.92■■□□□ 1.26
SMPD1-205ENST00000531303 SGSM2O43147 1006 aa22.92■■□□□ 1.26
SMPD1-205ENST00000531303 UTRNP46939 3433 aa22.91■■□□□ 1.26
SMPD1-205ENST00000531303 ZNF589Q86UQ0 364 aaPredicted RBP22.91■■□□□ 1.26
SMPD1-205ENST00000531303 TIAM2Q8IVF5 1701 aa22.9■■□□□ 1.26
SMPD1-205ENST00000531303 MYO3BQ8WXR4 1341 aa22.89■■□□□ 1.25
SMPD1-205ENST00000531303 DCAF8L1A6NGE4 600 aa22.89■■□□□ 1.25
SMPD1-205ENST00000531303 MBD4O95243 580 aa22.89■■□□□ 1.25
SMPD1-205ENST00000531303 LDHCP07864 332 aa22.89■■□□□ 1.25
SMPD1-205ENST00000531303 DYNLL1P63167 89 aaKnown RBP22.89■■□□□ 1.25
SMPD1-205ENST00000531303 AIDAQ96BJ3 306 aa22.89■■□□□ 1.25
SMPD1-205ENST00000531303 ARMT1Q9H993 441 aa22.89■■□□□ 1.25
SMPD1-205ENST00000531303 ANO2Q9NQ90 1003 aa22.89■■□□□ 1.25
SMPD1-205ENST00000531303 AATFQ9NY61 560 aaKnown RBP eCLIP22.89■■□□□ 1.25
SMPD1-205ENST00000531303 ADAMTSL1Q8N6G6 1762 aa22.89■■□□□ 1.25
SMPD1-205ENST00000531303 MROH7-TTC4A0A0A0MT08 1334 aa22.88■■□□□ 1.25
SMPD1-205ENST00000531303 RAD50Q92878 1312 aa22.88■■□□□ 1.25
SMPD1-205ENST00000531303 MAGEB6P1A0A0J9YX57 407 aa22.88■■□□□ 1.25
SMPD1-205ENST00000531303 GPAA1O43292 621 aa22.88■■□□□ 1.25
SMPD1-205ENST00000531303 RBM5P52756 815 aaKnown RBP eCLIP22.88■■□□□ 1.25
SMPD1-205ENST00000531303 KIAA1211Q6ZU35 1233 aa22.88■■□□□ 1.25
SMPD1-205ENST00000531303 SLF2Q8IX21 1173 aa22.88■■□□□ 1.25
SMPD1-205ENST00000531303 GMLQ99445 158 aa22.88■■□□□ 1.25
SMPD1-205ENST00000531303 CCDC171Q6TFL3 1326 aa22.87■■□□□ 1.25
SMPD1-205ENST00000531303 AGBL3Q8NEM8 1001 aa22.87■■□□□ 1.25
SMPD1-205ENST00000531303 TEKT1Q969V4 418 aa22.87■■□□□ 1.25
SMPD1-205ENST00000531303 NOL10Q9BSC4 688 aaKnown RBP22.87■■□□□ 1.25
SMPD1-205ENST00000531303 IGSF3O75054 1194 aa22.86■■□□□ 1.25
SMPD1-205ENST00000531303 CRKP46108 304 aa22.86■■□□□ 1.25
SMPD1-205ENST00000531303 GMPSP49915 693 aaPredicted RBP22.86■■□□□ 1.25
SMPD1-205ENST00000531303 LCORLQ8N3X6 602 aa22.86■■□□□ 1.25
SMPD1-205ENST00000531303 PCDHAC2Q9Y5I4 1007 aa22.86■■□□□ 1.25
SMPD1-205ENST00000531303 SHTN1A0MZ66 631 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 REC8O95072 547 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 USP17L8P0C7I0 530 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 BTDP43251 543 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 OGFOD1Q8N543 542 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 HDAC9Q9UKV0 1011 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 DAGLAQ9Y4D2 1042 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 PTH1RQ03431 593 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 VPS53Q5VIR6 699 aa22.85■■□□□ 1.25
SMPD1-205ENST00000531303 STRBPQ96SI9 672 aaKnown RBP22.85■■□□□ 1.25
SMPD1-205ENST00000531303 DDNO94850 711 aaPredicted RBP22.84■■□□□ 1.25
SMPD1-205ENST00000531303 BAG3O95817 575 aa22.84■■□□□ 1.25
SMPD1-205ENST00000531303 TMED8Q6PL24 325 aaPredicted RBP22.84■■□□□ 1.25
SMPD1-205ENST00000531303 RIOK1Q9BRS2 568 aaKnown RBP22.84■■□□□ 1.25
SMPD1-205ENST00000531303 GAKO14976 1311 aa22.83■■□□□ 1.25
SMPD1-205ENST00000531303 GPR75-ASB3A0A0A6YYF3 556 aa22.83■■□□□ 1.25
SMPD1-205ENST00000531303 PRKAB2O43741 272 aa22.83■■□□□ 1.25
SMPD1-205ENST00000531303 APPP05067 770 aa22.83■■□□□ 1.25
SMPD1-205ENST00000531303 RPS12P25398 132 aaKnown RBP22.83■■□□□ 1.25
SMPD1-205ENST00000531303 CFAP100Q494V2 611 aa22.83■■□□□ 1.25
SMPD1-205ENST00000531303 HHIPL2Q6UWX4 724 aa22.83■■□□□ 1.25
SMPD1-205ENST00000531303 GPC2Q8N158 579 aa22.83■■□□□ 1.25
SMPD1-205ENST00000531303 FAM163AQ96GL9 167 aaPredicted RBP22.83■■□□□ 1.25
SMPD1-205ENST00000531303 LSG1Q9H089 658 aaKnown RBP22.83■■□□□ 1.25
SMPD1-205ENST00000531303 SERPINA10Q9UK55 444 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms