RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
CHEK1-211ENST00000531062 TTF2Q9UNY4 1162 aaKnown RBP9.1□□□□□ -0.95
CHEK1-211ENST00000531062 DDX3YO15523 660 aaKnown RBP9.09□□□□□ -0.95
CHEK1-211ENST00000531062 ZNF16P17020 682 aaPredicted RBP9.09□□□□□ -0.95
CHEK1-211ENST00000531062 MBTPS1Q14703 1052 aa9.09□□□□□ -0.95
CHEK1-211ENST00000531062 TPTE2Q6XPS3 522 aa9.09□□□□□ -0.95
CHEK1-211ENST00000531062 NRSN2Q9GZP1 204 aa9.09□□□□□ -0.95
CHEK1-211ENST00000531062 IGHA1P01876 353 aa9.08□□□□□ -0.96
CHEK1-211ENST00000531062 PROCP04070 461 aa9.08□□□□□ -0.96
CHEK1-211ENST00000531062 CYP11A1P05108 521 aa9.08□□□□□ -0.96
CHEK1-211ENST00000531062 ACAD11Q709F0 780 aa9.08□□□□□ -0.96
CHEK1-211ENST00000531062 RGS22Q8NE09 1264 aa9.08□□□□□ -0.96
CHEK1-211ENST00000531062 CEP44Q9C0F1 390 aa9.08□□□□□ -0.96
CHEK1-211ENST00000531062 TMEM39AQ9NV64 488 aa9.08□□□□□ -0.96
CHEK1-211ENST00000531062 FBXO24O75426 580 aa9.07□□□□□ -0.96
CHEK1-211ENST00000531062 FAAP100Q0VG06 881 aa9.07□□□□□ -0.96
CHEK1-211ENST00000531062 CORO1BQ9BR76 489 aa9.07□□□□□ -0.96
CHEK1-211ENST00000531062 PPM1HQ9ULR3 514 aa9.07□□□□□ -0.96
CHEK1-211ENST00000531062 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
CHEK1-211ENST00000531062 Q6ZS46 218 aa9.06□□□□□ -0.96
CHEK1-211ENST00000531062 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
CHEK1-211ENST00000531062 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.06□□□□□ -0.96
CHEK1-211ENST00000531062 WFDC12Q8WWY7 111 aa9.06□□□□□ -0.96
CHEK1-211ENST00000531062 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
CHEK1-211ENST00000531062 RBM47A0AV96 593 aaKnown RBP9.05□□□□□ -0.96
CHEK1-211ENST00000531062 WISP1O95388 367 aa9.05□□□□□ -0.96
CHEK1-211ENST00000531062 AP3B2Q13367 1082 aa9.05□□□□□ -0.96
CHEK1-211ENST00000531062 POU4F3Q15319 338 aa9.05□□□□□ -0.96
CHEK1-211ENST00000531062 TXNRD3Q86VQ6 643 aa9.05□□□□□ -0.96
CHEK1-211ENST00000531062 UBASH3BQ8TF42 649 aa9.05□□□□□ -0.96
CHEK1-211ENST00000531062 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
CHEK1-211ENST00000531062 AKTIPQ9H8T0 292 aa9.05□□□□□ -0.96
CHEK1-211ENST00000531062 SAMM50Q9Y512 469 aa9.05□□□□□ -0.96
CHEK1-211ENST00000531062 MSTNO14793 375 aa9.04□□□□□ -0.96
CHEK1-211ENST00000531062 NOS3P29474 1203 aa9.04□□□□□ -0.96
CHEK1-211ENST00000531062 GATA4P43694 442 aa9.04□□□□□ -0.96
CHEK1-211ENST00000531062 HNRNPUQ00839 825 aaKnown RBP eCLIP9.04□□□□□ -0.96
CHEK1-211ENST00000531062 HP1BP3Q5SSJ5 553 aaPredicted RBP9.04□□□□□ -0.96
CHEK1-211ENST00000531062 TRIM56Q9BRZ2 755 aaKnown RBP9.04□□□□□ -0.96
CHEK1-211ENST00000531062 RUSC1Q9BVN2 902 aa9.04□□□□□ -0.96
CHEK1-211ENST00000531062 CBX8Q9HC52 389 aa9.04□□□□□ -0.96
CHEK1-211ENST00000531062 MEGF11A6BM72 1044 aa9.03□□□□□ -0.96
CHEK1-211ENST00000531062 MAOBP27338 520 aa9.03□□□□□ -0.96
CHEK1-211ENST00000531062 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
CHEK1-211ENST00000531062 PDE3AQ14432 1141 aa9.03□□□□□ -0.96
CHEK1-211ENST00000531062 TAF1CQ15572 869 aaPredicted RBP9.03□□□□□ -0.96
CHEK1-211ENST00000531062 CCDC85BQ15834 202 aaPredicted RBP9.03□□□□□ -0.96
CHEK1-211ENST00000531062 GPAT2Q6NUI2 795 aa9.03□□□□□ -0.96
CHEK1-211ENST00000531062 AGGF1Q8N302 714 aaeCLIP9.03□□□□□ -0.96
CHEK1-211ENST00000531062 LOC100289279A0A1B0GTE1 492 aa9.02□□□□□ -0.97
CHEK1-211ENST00000531062 ALX3O95076 343 aa9.02□□□□□ -0.97
CHEK1-211ENST00000531062 GLB1P16278 677 aa9.02□□□□□ -0.97
CHEK1-211ENST00000531062 SULF2Q8IWU5 870 aa9.02□□□□□ -0.97
CHEK1-211ENST00000531062 DZIP1LQ8IYY4 767 aaKnown RBP9.02□□□□□ -0.97
CHEK1-211ENST00000531062 CRELD1Q96HD1 420 aa9.02□□□□□ -0.97
CHEK1-211ENST00000531062 RAD18Q9NS91 495 aa9.02□□□□□ -0.97
CHEK1-211ENST00000531062 SART1O43290 800 aaKnown RBP9.01□□□□□ -0.97
CHEK1-211ENST00000531062 DLGAP3O95886 979 aa9.01□□□□□ -0.97
CHEK1-211ENST00000531062 LMNB1P20700 586 aa9.01□□□□□ -0.97
CHEK1-211ENST00000531062 MEI1Q5TIA1 1274 aa9.01□□□□□ -0.97
CHEK1-211ENST00000531062 NUTM2GQ5VZR2 741 aa9.01□□□□□ -0.97
CHEK1-211ENST00000531062 FDX2Q6P4F2 183 aa9.01□□□□□ -0.97
CHEK1-211ENST00000531062 NECAB3Q96P71 396 aaPredicted RBP9.01□□□□□ -0.97
CHEK1-211ENST00000531062 EMILIN2Q9BXX0 1053 aa9.01□□□□□ -0.97
CHEK1-211ENST00000531062 ZC3H12CQ9C0D7 883 aaKnown RBP9.01□□□□□ -0.97
CHEK1-211ENST00000531062 RNF208Q9H0X6 261 aa9.01□□□□□ -0.97
CHEK1-211ENST00000531062 NME2P22392 152 aa9□□□□□ -0.97
CHEK1-211ENST00000531062 SV2BQ7L1I2 683 aa9□□□□□ -0.97
CHEK1-211ENST00000531062 KCNB2Q92953 911 aa9□□□□□ -0.97
CHEK1-211ENST00000531062 TMPRSS13Q9BYE2 586 aa9□□□□□ -0.97
CHEK1-211ENST00000531062 EXOSC6Q5RKV6 272 aaKnown RBP8.99□□□□□ -0.97
CHEK1-211ENST00000531062 MEGF10Q96KG7 1140 aa8.99□□□□□ -0.97
CHEK1-211ENST00000531062 CEP41Q9BYV8 373 aa8.99□□□□□ -0.97
CHEK1-211ENST00000531062 SUGCTQ9HAC7 445 aa8.99□□□□□ -0.97
CHEK1-211ENST00000531062 CYP4F12Q9HCS2 524 aa8.99□□□□□ -0.97
CHEK1-211ENST00000531062 ENC1O14682 589 aa8.98□□□□□ -0.97
CHEK1-211ENST00000531062 CELA3AP09093 270 aa8.98□□□□□ -0.97
CHEK1-211ENST00000531062 GSTP1P09211 210 aaKnown RBP8.98□□□□□ -0.97
CHEK1-211ENST00000531062 CTSHP09668 335 aa8.98□□□□□ -0.97
CHEK1-211ENST00000531062 ARNTP27540 789 aa8.98□□□□□ -0.97
CHEK1-211ENST00000531062 LRRC14Q15048 493 aa8.98□□□□□ -0.97
CHEK1-211ENST00000531062 MAP3K11Q16584 847 aa8.98□□□□□ -0.97
CHEK1-211ENST00000531062 C12orf50Q8NA57 414 aaPredicted RBP8.98□□□□□ -0.97
CHEK1-211ENST00000531062 TMEM87AQ8NBN3 555 aa8.98□□□□□ -0.97
CHEK1-211ENST00000531062 ACSBG1Q96GR2 724 aa8.98□□□□□ -0.97
CHEK1-211ENST00000531062 ECEL1O95672 775 aa8.97□□□□□ -0.97
CHEK1-211ENST00000531062 CTSBP07858 339 aa8.97□□□□□ -0.97
CHEK1-211ENST00000531062 ST13P50502 369 aaKnown RBP8.97□□□□□ -0.97
CHEK1-211ENST00000531062 TSNAXIP1Q2TAA8 658 aa8.97□□□□□ -0.97
CHEK1-211ENST00000531062 MAP1SQ66K74 1059 aaPredicted RBP8.97□□□□□ -0.97
CHEK1-211ENST00000531062 PDZD3Q86UT5 571 aa8.97□□□□□ -0.97
CHEK1-211ENST00000531062 MRRFQ96E11 262 aaKnown RBP8.97□□□□□ -0.97
CHEK1-211ENST00000531062 UBL7Q96S82 380 aaPredicted RBP8.97□□□□□ -0.97
CHEK1-211ENST00000531062 TPSG1Q9NRR2 321 aa8.97□□□□□ -0.97
CHEK1-211ENST00000531062 USP31Q70CQ4 1352 aa8.97□□□□□ -0.97
CHEK1-211ENST00000531062 PAGE1O75459 146 aa8.96□□□□□ -0.98
CHEK1-211ENST00000531062 MRPL58Q14197 206 aaKnown RBP8.96□□□□□ -0.98
CHEK1-211ENST00000531062 PCNX4Q63HM2 1172 aa8.96□□□□□ -0.98
CHEK1-211ENST00000531062 ANKRD34AQ69YU3 496 aa8.96□□□□□ -0.98
CHEK1-211ENST00000531062 TTBK2Q6IQ55 1244 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms