RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ANKRD44Q8N8A2 993 aa19.86■□□□□ 0.77
CHMP4A-204ENST00000530996 OPTNQ96CV9 577 aa19.86■□□□□ 0.77
CHMP4A-204ENST00000530996 TMEM39BQ9GZU3 492 aa19.86■□□□□ 0.77
CHMP4A-204ENST00000530996 TMOD2Q9NZR1 351 aa19.86■□□□□ 0.77
CHMP4A-204ENST00000530996 RIPOR2Q9Y4F9 1068 aa19.86■□□□□ 0.77
CHMP4A-204ENST00000530996 GJA5P36382 358 aa19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 CRHR2Q13324 411 aa19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 RABL6Q3YEC7 729 aaPredicted RBP19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 CDAN1Q8IWY9 1227 aa19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 KLHDC4Q8TBB5 520 aa19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 TBC1D22AQ8WUA7 517 aa19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 TEKT1Q969V4 418 aa19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 ERO1AQ96HE7 468 aa19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 CSADQ9Y600 493 aa19.85■□□□□ 0.77
CHMP4A-204ENST00000530996 ZNF521Q96K83 1311 aa19.84■□□□□ 0.77
CHMP4A-204ENST00000530996 E9PSI1 815 aa19.84■□□□□ 0.77
CHMP4A-204ENST00000530996 CACNB3P54284 484 aa19.84■□□□□ 0.77
CHMP4A-204ENST00000530996 IFIT1P09914 478 aaKnown RBP19.83■□□□□ 0.77
CHMP4A-204ENST00000530996 PUM3Q15397 648 aaKnown RBP19.83■□□□□ 0.77
CHMP4A-204ENST00000530996 OTOP1Q7RTM1 612 aa19.83■□□□□ 0.77
CHMP4A-204ENST00000530996 CD99L2Q8TCZ2 262 aa19.83■□□□□ 0.77
CHMP4A-204ENST00000530996 TNRC18O15417 2968 aaPredicted RBP19.83■□□□□ 0.76
CHMP4A-204ENST00000530996 MAST3O60307 1309 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 PDE8BO95263 885 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 VGLL4Q14135 290 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 GRIK5Q16478 980 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 PRPF38BQ5VTL8 546 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 FBXO33Q7Z6M2 555 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 SSH1Q8WYL5 1049 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 OTUD5Q96G74 571 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 SMC4Q9NTJ3 1288 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 OTOFQ9HC10 1997 aa19.82■□□□□ 0.76
CHMP4A-204ENST00000530996 BCAMP50895 628 aa19.81■□□□□ 0.76
CHMP4A-204ENST00000530996 CNKSR2Q8WXI2 1034 aa19.81■□□□□ 0.76
CHMP4A-204ENST00000530996 TEPSINQ96N21 525 aa19.81■□□□□ 0.76
CHMP4A-204ENST00000530996 CCL15-CCL14A0A0B4J2E2 113 aa19.8■□□□□ 0.76
CHMP4A-204ENST00000530996 SLC5A1P13866 664 aa19.8■□□□□ 0.76
CHMP4A-204ENST00000530996 TAF1CQ15572 869 aaPredicted RBP19.8■□□□□ 0.76
CHMP4A-204ENST00000530996 CCL15Q16663 113 aa19.8■□□□□ 0.76
CHMP4A-204ENST00000530996 VGLL2Q8N8G2 317 aa19.8■□□□□ 0.76
CHMP4A-204ENST00000530996 GTF2A2P52657 109 aa19.79■□□□□ 0.76
CHMP4A-204ENST00000530996 MAP3K9P80192 1104 aa19.79■□□□□ 0.76
CHMP4A-204ENST00000530996 SP3Q02447 781 aa19.79■□□□□ 0.76
CHMP4A-204ENST00000530996 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.79■□□□□ 0.76
CHMP4A-204ENST00000530996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
CHMP4A-204ENST00000530996 WRNIP1Q96S55 665 aa19.79■□□□□ 0.76
CHMP4A-204ENST00000530996 PTPN18Q99952 460 aa19.79■□□□□ 0.76
CHMP4A-204ENST00000530996 EFCC1Q9HA90 598 aa19.79■□□□□ 0.76
CHMP4A-204ENST00000530996 PDE4DIPQ5VU43 2346 aa19.78■□□□□ 0.76
CHMP4A-204ENST00000530996 HDLBPQ00341 1268 aaKnown RBP19.78■□□□□ 0.76
CHMP4A-204ENST00000530996 BRI3BPQ8WY22 251 aa19.78■□□□□ 0.76
CHMP4A-204ENST00000530996 HOOK2Q96ED9 719 aa19.78■□□□□ 0.76
CHMP4A-204ENST00000530996 USP44Q9H0E7 712 aa19.78■□□□□ 0.76
CHMP4A-204ENST00000530996 WDHD1O75717 1129 aaPredicted RBP19.77■□□□□ 0.76
CHMP4A-204ENST00000530996 ZDHHC15Q96MV8 337 aa19.77■□□□□ 0.76
CHMP4A-204ENST00000530996 SIL1Q9H173 461 aa19.77■□□□□ 0.76
CHMP4A-204ENST00000530996 ZFYVE28Q9HCC9 887 aa19.77■□□□□ 0.76
CHMP4A-204ENST00000530996 KIF16BQ96L93 1317 aa19.76■□□□□ 0.75
CHMP4A-204ENST00000530996 TESPA1A2RU30 521 aaPredicted RBP19.76■□□□□ 0.75
CHMP4A-204ENST00000530996 EYA2O00167 538 aa19.76■□□□□ 0.75
CHMP4A-204ENST00000530996 UBTFL1P0CB47 393 aaPredicted RBP19.76■□□□□ 0.75
CHMP4A-204ENST00000530996 INTS3Q68E01 1043 aaKnown RBP19.76■□□□□ 0.75
CHMP4A-204ENST00000530996 MS4A4AQ96JQ5 239 aa19.76■□□□□ 0.75
CHMP4A-204ENST00000530996 PTPN22Q9Y2R2 807 aa19.76■□□□□ 0.75
CHMP4A-204ENST00000530996 LAMB1P07942 1786 aa19.75■□□□□ 0.75
CHMP4A-204ENST00000530996 SPDYE5A6NIY4 337 aa19.75■□□□□ 0.75
CHMP4A-204ENST00000530996 DCAF15Q66K64 600 aa19.75■□□□□ 0.75
CHMP4A-204ENST00000530996 LPIN2Q92539 896 aa19.75■□□□□ 0.75
CHMP4A-204ENST00000530996 SUGT1Q9Y2Z0 365 aa19.75■□□□□ 0.75
CHMP4A-204ENST00000530996 HTTP42858 3142 aa19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 CETPP11597 493 aa19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 FGFR2P21802 821 aa19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 ARHGEF6Q15052 776 aa19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 ALDH1L2Q3SY69 923 aa19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 WDR66Q8TBY9 1149 aa19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 ZKSCAN4Q969J2 545 aaPredicted RBP19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 SNCAIPQ9Y6H5 919 aa19.74■□□□□ 0.75
CHMP4A-204ENST00000530996 RPAP1Q9BWH6 1393 aaPredicted RBP19.73■□□□□ 0.75
CHMP4A-204ENST00000530996 ATP2B3Q16720 1220 aa19.73■□□□□ 0.75
CHMP4A-204ENST00000530996 APOBEC3HQ6NTF7 200 aaKnown RBP19.73■□□□□ 0.75
CHMP4A-204ENST00000530996 FAM83AQ86UY5 434 aa19.73■□□□□ 0.75
CHMP4A-204ENST00000530996 ERO1BQ86YB8 467 aa19.73■□□□□ 0.75
CHMP4A-204ENST00000530996 FAM43AQ8N2R8 423 aa19.73■□□□□ 0.75
CHMP4A-204ENST00000530996 GNL3LQ9NVN8 582 aaKnown RBP19.73■□□□□ 0.75
CHMP4A-204ENST00000530996 POTEFA5A3E0 1075 aa19.72■□□□□ 0.75
CHMP4A-204ENST00000530996 RFX5P48382 616 aaPredicted RBP19.72■□□□□ 0.75
CHMP4A-204ENST00000530996 SNAPC2Q13487 334 aa19.72■□□□□ 0.75
CHMP4A-204ENST00000530996 HHIPL2Q6UWX4 724 aa19.72■□□□□ 0.75
CHMP4A-204ENST00000530996 CDCA7LQ96GN5 454 aa19.72■□□□□ 0.75
CHMP4A-204ENST00000530996 ZNF341Q9BYN7 854 aa19.72■□□□□ 0.75
CHMP4A-204ENST00000530996 TCP10Q12799 353 aa19.71■□□□□ 0.75
CHMP4A-204ENST00000530996 KIF22Q14807 665 aa19.71■□□□□ 0.75
CHMP4A-204ENST00000530996 DIXDC1Q155Q3 683 aa19.71■□□□□ 0.75
CHMP4A-204ENST00000530996 SLC9C1Q4G0N8 1177 aa19.71■□□□□ 0.75
CHMP4A-204ENST00000530996 FKBP1CQ5VVH2 108 aa19.71■□□□□ 0.75
CHMP4A-204ENST00000530996 MIGA2Q7L4E1 593 aa19.71■□□□□ 0.75
CHMP4A-204ENST00000530996 CEP126Q9P2H0 1117 aa19.71■□□□□ 0.75
CHMP4A-204ENST00000530996 DAGLAQ9Y4D2 1042 aa19.71■□□□□ 0.75
CHMP4A-204ENST00000530996 LDHBP07195 334 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms