RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CARD10Q9BWT7 1032 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 PHAXQ9H814 394 aaKnown RBP6.79□□□□□ -1.32
PCF11-205ENST00000530906 ZNF395Q9H8N7 513 aaPredicted RBP6.79□□□□□ -1.32
PCF11-205ENST00000530906 SLAIN2Q9P270 581 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 UBR2Q8IWV8 1755 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 PAPPAQ13219 1627 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 COL5A2P05997 1499 aaPredicted RBP6.79□□□□□ -1.32
PCF11-205ENST00000530906 C5P01031 1676 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 PNMA6EA0A0J9YXQ4 647 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 K7ELQ4 463 aaPredicted RBP6.78□□□□□ -1.32
PCF11-205ENST00000530906 ADH1AP07327 375 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 DEKP35659 375 aaKnown RBP6.78□□□□□ -1.32
PCF11-205ENST00000530906 FOXD4L5Q5VV16 416 aaPredicted RBP6.78□□□□□ -1.32
PCF11-205ENST00000530906 TICAM2Q86XR7 235 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 KCTD17Q8N5Z5 321 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 WHAMMQ8TF30 809 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 GPATCH3Q96I76 525 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 USP26Q9BXU7 913 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 PRDM11Q9NQV5 511 aa6.78□□□□□ -1.32
PCF11-205ENST00000530906 C9orf78Q9NZ63 289 aaPredicted RBP6.78□□□□□ -1.32
PCF11-205ENST00000530906 GRM8O00222 908 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 SRGAP3O43295 1099 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 GLRX3O76003 335 aaKnown RBP6.77□□□□□ -1.33
PCF11-205ENST00000530906 DDIT3P35638 169 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 RASSF7Q02833 373 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 SV2AQ7L0J3 742 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 PPP1R42Q7Z4L9 355 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 RHPN1Q8TCX5 695 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 KIF2CQ99661 725 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
PCF11-205ENST00000530906 EXOC6BQ9Y2D4 811 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 MAP3K2Q9Y2U5 619 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 AK9Q5TCS8 1911 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 PLCH1Q4KWH8 1693 aa6.77□□□□□ -1.33
PCF11-205ENST00000530906 LRP6O75581 1613 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 AHDC1Q5TGY3 1603 aaPredicted RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 COL22A1Q8NFW1 1626 aaPredicted RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 CDC14CA4D256 554 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 HIP1O00291 1037 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 CYP27B1O15528 508 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 KCNQ3O43525 872 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 SURF6O75683 361 aaKnown RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 ARHGEF15O94989 841 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 IL2RBP14784 551 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 PTGIRP43119 386 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 HSPA2P54652 639 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 CABP4P57796 275 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 RAB15P59190 212 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 DZIP3Q86Y13 1208 aaKnown RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 C16orf71Q8IYS4 520 aaPredicted RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 CNTROBQ8N137 903 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 CLASRPQ8N2M8 674 aaKnown RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 TMEM151AQ8N4L1 468 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 ZCRB1Q8TBF4 217 aaKnown RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 RUFY2Q8WXA3 655 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 GBP4Q96PP9 640 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 ESYT1Q9BSJ8 1104 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 TRIM34Q9BYJ4 488 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 CWC22Q9HCG8 908 aaKnown RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 GLI3P10071 1580 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 COL14A1Q05707 1796 aaKnown RBP6.76□□□□□ -1.33
PCF11-205ENST00000530906 TNS2Q63HR2 1409 aa6.76□□□□□ -1.33
PCF11-205ENST00000530906 SMARCA5O60264 1052 aaPredicted RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 GDF11O95390 407 aa6.75□□□□□ -1.33
PCF11-205ENST00000530906 HSP90AA1P07900 732 aaKnown RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 NBPF7P0C2Y1 421 aaPredicted RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 CHMLP26374 656 aa6.75□□□□□ -1.33
PCF11-205ENST00000530906 RFC5P40937 340 aa6.75□□□□□ -1.33
PCF11-205ENST00000530906 CLEC17AQ6ZS10 378 aa6.75□□□□□ -1.33
PCF11-205ENST00000530906 NFATC2IPQ8NCF5 419 aa6.75□□□□□ -1.33
PCF11-205ENST00000530906 PNMA1Q8ND90 353 aa6.75□□□□□ -1.33
PCF11-205ENST00000530906 PLBD2Q8NHP8 589 aa6.75□□□□□ -1.33
PCF11-205ENST00000530906 OTUD7AQ8TE49 926 aaPredicted RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 ZNF496Q96IT1 587 aaPredicted RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 TEX13AQ9BXU3 409 aaPredicted RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 SLKQ9H2G2 1235 aaPredicted RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 CUEDC1Q9NWM3 386 aaPredicted RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 ISY1Q9ULR0 285 aaKnown RBP6.75□□□□□ -1.33
PCF11-205ENST00000530906 ARFGEF2Q9Y6D5 1785 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 RFX7Q2KHR2 1363 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 SHANK3Q9BYB0 1731 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 NEURL1BA8MQ27 555 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 FRAT2O75474 233 aaPredicted RBP6.74□□□□□ -1.33
PCF11-205ENST00000530906 NUCB2P80303 420 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 OS9Q13438 667 aaPredicted RBP6.74□□□□□ -1.33
PCF11-205ENST00000530906 GCKRQ14397 625 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 CHRNA2Q15822 529 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 SKOR2Q2VWA4 1001 aaPredicted RBP6.74□□□□□ -1.33
PCF11-205ENST00000530906 TOM1L2Q6ZVM7 507 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 SVOPQ8N4V2 548 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 ECHDC1Q9NTX5 307 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 KCPQ6ZWJ8 1503 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 RAD50Q92878 1312 aa6.74□□□□□ -1.33
PCF11-205ENST00000530906 ZNF335Q9H4Z2 1342 aaPredicted RBP6.74□□□□□ -1.33
PCF11-205ENST00000530906 AFDNP55196 1824 aaKnown RBP6.73□□□□□ -1.33
PCF11-205ENST00000530906 NUP188Q5SRE5 1749 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 GOLGA6L22H0YM25 854 aa6.73□□□□□ -1.33
PCF11-205ENST00000530906 RNF225M0QZC1 329 aaPredicted RBP6.73□□□□□ -1.33
PCF11-205ENST00000530906 APBB1O00213 710 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms