RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 VPS33BQ9H267 617 aa16.76■□□□□ 0.27
NXF1-207ENST00000530875 FER1L6Q2WGJ9 1857 aa16.76■□□□□ 0.27
NXF1-207ENST00000530875 COL4A5P29400 1685 aa16.76■□□□□ 0.27
NXF1-207ENST00000530875 MYH7P12883 1935 aa16.76■□□□□ 0.27
NXF1-207ENST00000530875 CHD4Q14839 1912 aa16.76■□□□□ 0.27
NXF1-207ENST00000530875 CYP7A1P22680 504 aa16.76■□□□□ 0.27
NXF1-207ENST00000530875 MXD3Q9BW11 206 aa16.76■□□□□ 0.27
NXF1-207ENST00000530875 CCDC171Q6TFL3 1326 aa16.76■□□□□ 0.27
NXF1-207ENST00000530875 RASSF7Q02833 373 aa16.75■□□□□ 0.27
NXF1-207ENST00000530875 PTH1RQ03431 593 aa16.75■□□□□ 0.27
NXF1-207ENST00000530875 NAA16Q6N069 864 aaPredicted RBP16.75■□□□□ 0.27
NXF1-207ENST00000530875 ADGRA1Q86SQ6 560 aa16.75■□□□□ 0.27
NXF1-207ENST00000530875 DZIP1Q86YF9 867 aaKnown RBP16.75■□□□□ 0.27
NXF1-207ENST00000530875 TBC1D32Q96NH3 1257 aa16.75■□□□□ 0.27
NXF1-207ENST00000530875 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
NXF1-207ENST00000530875 YDJCA8MPS7 323 aa16.74■□□□□ 0.27
NXF1-207ENST00000530875 NBR1Q14596 966 aa16.74■□□□□ 0.27
NXF1-207ENST00000530875 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
NXF1-207ENST00000530875 SRCAPQ6ZRS2 3230 aa16.74■□□□□ 0.27
NXF1-207ENST00000530875 GPAA1O43292 621 aa16.74■□□□□ 0.27
NXF1-207ENST00000530875 STRIP1Q5VSL9 837 aa16.74■□□□□ 0.27
NXF1-207ENST00000530875 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
NXF1-207ENST00000530875 LTBP3Q9NS15 1303 aa16.74■□□□□ 0.27
NXF1-207ENST00000530875 USP17L3A6NCW0 530 aa16.73■□□□□ 0.27
NXF1-207ENST00000530875 USP17L4A6NCW7 530 aa16.73■□□□□ 0.27
NXF1-207ENST00000530875 VPS53Q5VIR6 699 aa16.73■□□□□ 0.27
NXF1-207ENST00000530875 USP17L1Q7RTZ2 530 aa16.73■□□□□ 0.27
NXF1-207ENST00000530875 NIM1KQ8IY84 436 aa16.73■□□□□ 0.27
NXF1-207ENST00000530875 MIGA1Q8NAN2 632 aa16.73■□□□□ 0.27
NXF1-207ENST00000530875 DIXDC1Q155Q3 683 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 DACT2Q5SW24 774 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 ARHGAP27Q6ZUM4 889 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 AIDAQ96BJ3 306 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 SCN9AQ15858 1988 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 MBD4O95243 580 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 SLC4A3P48751 1232 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
NXF1-207ENST00000530875 PRELPP51888 382 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 ARMT1Q9H993 441 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 ZNRF3Q9ULT6 936 aa16.72■□□□□ 0.27
NXF1-207ENST00000530875 MAST2Q6P0Q8 1798 aa16.71■□□□□ 0.27
NXF1-207ENST00000530875 F8W031 263 aaPredicted RBP16.71■□□□□ 0.27
NXF1-207ENST00000530875 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
NXF1-207ENST00000530875 IGSF3O75054 1194 aa16.71■□□□□ 0.27
NXF1-207ENST00000530875 YBX3P16989 372 aaKnown RBP eCLIP16.71■□□□□ 0.27
NXF1-207ENST00000530875 JDP2Q8WYK2 163 aa16.71■□□□□ 0.27
NXF1-207ENST00000530875 MAP4K1Q92918 833 aa16.71■□□□□ 0.27
NXF1-207ENST00000530875 MAGEB6P1A0A0J9YX57 407 aa16.7■□□□□ 0.26
NXF1-207ENST00000530875 RAD17O75943 681 aa16.7■□□□□ 0.26
NXF1-207ENST00000530875 HSPD1P10809 573 aaKnown RBP16.7■□□□□ 0.26
NXF1-207ENST00000530875 GSTO1P78417 241 aa16.7■□□□□ 0.26
NXF1-207ENST00000530875 LCORLQ8N3X6 602 aa16.7■□□□□ 0.26
NXF1-207ENST00000530875 STRBPQ96SI9 672 aaKnown RBP16.7■□□□□ 0.26
NXF1-207ENST00000530875 SUGT1Q9Y2Z0 365 aa16.7■□□□□ 0.26
NXF1-207ENST00000530875 DYNLL1P63167 89 aaKnown RBP16.7■□□□□ 0.26
NXF1-207ENST00000530875 TMED8Q6PL24 325 aaPredicted RBP16.7■□□□□ 0.26
NXF1-207ENST00000530875 TTF2Q9UNY4 1162 aaKnown RBP16.7■□□□□ 0.26
NXF1-207ENST00000530875 RBM8AQ9Y5S9 174 aaKnown RBP16.7■□□□□ 0.26
NXF1-207ENST00000530875 FOXP2O15409 715 aa16.69■□□□□ 0.26
NXF1-207ENST00000530875 MCCP23508 829 aa16.69■□□□□ 0.26
NXF1-207ENST00000530875 FKBP1AP62942 108 aaKnown RBP16.69■□□□□ 0.26
NXF1-207ENST00000530875 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
NXF1-207ENST00000530875 DSCC1Q9BVC3 393 aa16.69■□□□□ 0.26
NXF1-207ENST00000530875 AATFQ9NY61 560 aaKnown RBP eCLIP16.69■□□□□ 0.26
NXF1-207ENST00000530875 PSMD14O00487 310 aa16.68■□□□□ 0.26
NXF1-207ENST00000530875 HSPA4P34932 840 aa16.68■□□□□ 0.26
NXF1-207ENST00000530875 KIAA0825Q8IV33 1275 aa16.68■□□□□ 0.26
NXF1-207ENST00000530875 PALD1Q9ULE6 856 aa16.68■□□□□ 0.26
NXF1-207ENST00000530875 CCDC88AQ3V6T2 1871 aa16.68■□□□□ 0.26
NXF1-207ENST00000530875 ZNF646O15015 1829 aaPredicted RBP16.68■□□□□ 0.26
NXF1-207ENST00000530875 MROH7-TTC4A0A0A0MT08 1334 aa16.68■□□□□ 0.26
NXF1-207ENST00000530875 LDHCP07864 332 aa16.68■□□□□ 0.26
NXF1-207ENST00000530875 PRKAB2O43741 272 aa16.67■□□□□ 0.26
NXF1-207ENST00000530875 SCNN1DP51172 638 aa16.67■□□□□ 0.26
NXF1-207ENST00000530875 CXCL9Q07325 125 aa16.67■□□□□ 0.26
NXF1-207ENST00000530875 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
NXF1-207ENST00000530875 RSBN1LQ6PCB5 846 aaPredicted RBP16.67■□□□□ 0.26
NXF1-207ENST00000530875 SLF2Q8IX21 1173 aa16.67■□□□□ 0.26
NXF1-207ENST00000530875 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
NXF1-207ENST00000530875 APPP05067 770 aa16.66■□□□□ 0.26
NXF1-207ENST00000530875 VIL1P09327 827 aaKnown RBP16.66■□□□□ 0.26
NXF1-207ENST00000530875 KIF2CQ99661 725 aa16.66■□□□□ 0.26
NXF1-207ENST00000530875 SLC4A4Q9Y6R1 1079 aa16.66■□□□□ 0.26
NXF1-207ENST00000530875 GNAT2P19087 354 aa16.66■□□□□ 0.26
NXF1-207ENST00000530875 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
NXF1-207ENST00000530875 FAM163AQ96GL9 167 aaPredicted RBP16.66■□□□□ 0.26
NXF1-207ENST00000530875 GAKO14976 1311 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 GSG1L2A8MUP6 293 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 PATL2C9JE40 543 aaKnown RBP16.65■□□□□ 0.26
NXF1-207ENST00000530875 SLC27A2O14975 620 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 LMNB1P20700 586 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 BTDP43251 543 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 CIAPIN1Q6FI81 312 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 SDR42E1Q8WUS8 393 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 NOL10Q9BSC4 688 aaKnown RBP16.65■□□□□ 0.26
NXF1-207ENST00000530875 EPB41L4AQ9HCS5 686 aaPredicted RBP16.65■□□□□ 0.26
NXF1-207ENST00000530875 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
NXF1-207ENST00000530875 DAGLAQ9Y4D2 1042 aa16.65■□□□□ 0.26
NXF1-207ENST00000530875 MYO3BQ8WXR4 1341 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms