RNA–Protein interactions for RNA: ENST00000530342.2

KDM2A-212, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-212ENST00000530342 UBXN6Q9BZV1 441 aa11.78□□□□□ -0.52
KDM2A-212ENST00000530342 CLIP2Q9UDT6 1046 aa11.78□□□□□ -0.52
KDM2A-212ENST00000530342 PAXBP1Q9Y5B6 917 aa11.78□□□□□ -0.52
KDM2A-212ENST00000530342 ATP5J2-PTCD1G3V325 749 aa11.78□□□□□ -0.52
KDM2A-212ENST00000530342 CAVIN2O95810 425 aa11.78□□□□□ -0.52
KDM2A-212ENST00000530342 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
KDM2A-212ENST00000530342 BCCIPQ9P287 314 aaKnown RBP eCLIP11.78□□□□□ -0.52
KDM2A-212ENST00000530342 NUP98P52948 1817 aa11.77□□□□□ -0.52
KDM2A-212ENST00000530342 FOXO4P98177 505 aa11.77□□□□□ -0.53
KDM2A-212ENST00000530342 DNTTIP2Q5QJE6 756 aaKnown RBP11.77□□□□□ -0.53
KDM2A-212ENST00000530342 ARMCX5Q6P1M9 558 aa11.77□□□□□ -0.53
KDM2A-212ENST00000530342 CERS3Q8IU89 383 aa11.77□□□□□ -0.53
KDM2A-212ENST00000530342 CCAR2Q8N163 923 aaKnown RBP11.77□□□□□ -0.53
KDM2A-212ENST00000530342 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.53
KDM2A-212ENST00000530342 BCL9O00512 1426 aa11.77□□□□□ -0.53
KDM2A-212ENST00000530342 TNNT1P13805 278 aa11.77□□□□□ -0.53
KDM2A-212ENST00000530342 KCNJ6P48051 423 aa11.77□□□□□ -0.53
KDM2A-212ENST00000530342 TMX1Q9H3N1 280 aa11.77□□□□□ -0.53
KDM2A-212ENST00000530342 RREB1Q92766 1687 aa11.77□□□□□ -0.53
KDM2A-212ENST00000530342 MROH7-TTC4A0A0A0MT08 1334 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 METTL22Q9BUU2 404 aaPredicted RBP11.76□□□□□ -0.53
KDM2A-212ENST00000530342 GOLGA6L6A8MZA4 724 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 STK3Q13188 491 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 FBXO38Q6PIJ6 1188 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 TTLL7Q6ZT98 887 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 LINC00116Q8NCU8 138 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 LRRC4BQ9NT99 713 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
KDM2A-212ENST00000530342 PSDA5PKW4 1024 aaPredicted RBP11.76□□□□□ -0.53
KDM2A-212ENST00000530342 TFCP2Q12800 502 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 TMEM139Q8IV31 216 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 GPATCH3Q96I76 525 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 CCDC87Q9NVE4 849 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
KDM2A-212ENST00000530342 SRCAPQ6ZRS2 3230 aa11.76□□□□□ -0.53
KDM2A-212ENST00000530342 KIF6Q6ZMV9 814 aa11.75□□□□□ -0.53
KDM2A-212ENST00000530342 TEX13AQ9BXU3 409 aaPredicted RBP11.75□□□□□ -0.53
KDM2A-212ENST00000530342 ZNF215Q9UL58 517 aaPredicted RBP11.75□□□□□ -0.53
KDM2A-212ENST00000530342 CHMP3Q9Y3E7 222 aa11.75□□□□□ -0.53
KDM2A-212ENST00000530342 RFC4P35249 363 aa11.75□□□□□ -0.53
KDM2A-212ENST00000530342 TICAM2Q86XR7 235 aa11.75□□□□□ -0.53
KDM2A-212ENST00000530342 CCDC24Q8N4L8 307 aa11.75□□□□□ -0.53
KDM2A-212ENST00000530342 FSD1Q9BTV5 496 aa11.75□□□□□ -0.53
KDM2A-212ENST00000530342 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
KDM2A-212ENST00000530342 ZPR1O75312 459 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 GABPB1Q06547 395 aaPredicted RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 STX1AQ16623 288 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 CEP135Q66GS9 1140 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 C9orf78Q9NZ63 289 aaPredicted RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 WWC3Q9ULE0 1092 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 RIC1Q4ADV7 1423 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 COL4A1P02462 1669 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 AXDND1Q5T1B0 1012 aaPredicted RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 DBNDD2Q9BQY9 259 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 FHOD1Q9Y613 1164 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 MYH8P13535 1937 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 FAM237AA0A1B0GTK4 181 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 CYP19A1P11511 503 aaPredicted RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 TRIM65Q6PJ69 517 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 MYD88Q99836 296 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 DSCC1Q9BVC3 393 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 SIL1Q9H173 461 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 CGNQ9P2M7 1197 aaKnown RBP11.74□□□□□ -0.53
KDM2A-212ENST00000530342 PCDHA7Q9UN72 937 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 MYH1P12882 1939 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 LAMB1P07942 1786 aa11.74□□□□□ -0.53
KDM2A-212ENST00000530342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
KDM2A-212ENST00000530342 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 ZRANB2O95218 330 aaKnown RBP eCLIP11.73□□□□□ -0.53
KDM2A-212ENST00000530342 PDIA3P30101 505 aaKnown RBP11.73□□□□□ -0.53
KDM2A-212ENST00000530342 KRT32Q14532 448 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
KDM2A-212ENST00000530342 TMEM51Q9NW97 253 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 RTEL1Q9NZ71 1219 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 MAST3O60307 1309 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 TERF2Q15554 542 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 MCMDC2Q4G0Z9 681 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 ATL3Q6DD88 541 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
KDM2A-212ENST00000530342 TRIM5Q9C035 493 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 CICQ96RK0 1608 aaPredicted RBP11.73□□□□□ -0.53
KDM2A-212ENST00000530342 KIAA1551Q9HCM1 1747 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 A0A1W2PQ27 194 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 A0A1W2PQ64 194 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 A0A1W2PQD8 194 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
KDM2A-212ENST00000530342 RNF20Q5VTR2 975 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms