RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CDC42BPGQ6DT37 1551 aa12.4□□□□□ -0.42
CCDC90B-217ENST00000530253 FRRS1LQ9P0K9 344 aa12.4□□□□□ -0.42
CCDC90B-217ENST00000530253 USP21Q9UK80 565 aa12.4□□□□□ -0.42
CCDC90B-217ENST00000530253 MAP3K6O95382 1288 aa12.39□□□□□ -0.43
CCDC90B-217ENST00000530253 ARID4AP29374 1257 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-217ENST00000530253 WAPLQ7Z5K2 1190 aa12.39□□□□□ -0.43
CCDC90B-217ENST00000530253 TRAK1Q9UPV9 953 aa12.39□□□□□ -0.43
CCDC90B-217ENST00000530253 DISP3Q9P2K9 1392 aa12.39□□□□□ -0.43
CCDC90B-217ENST00000530253 DCCP43146 1447 aa12.38□□□□□ -0.43
CCDC90B-217ENST00000530253 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-217ENST00000530253 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-217ENST00000530253 FAM35AQ86V20 835 aa12.38□□□□□ -0.43
CCDC90B-217ENST00000530253 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
CCDC90B-217ENST00000530253 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
CCDC90B-217ENST00000530253 CARD11Q9BXL7 1154 aa12.37□□□□□ -0.43
CCDC90B-217ENST00000530253 DMGDHQ9UI17 866 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-217ENST00000530253 QRICH2Q9H0J4 1663 aa12.37□□□□□ -0.43
CCDC90B-217ENST00000530253 FAM196BA6NMK8 535 aa12.36□□□□□ -0.43
CCDC90B-217ENST00000530253 ARSDP51689 593 aa12.36□□□□□ -0.43
CCDC90B-217ENST00000530253 DPYDQ12882 1025 aa12.36□□□□□ -0.43
CCDC90B-217ENST00000530253 PTK7Q13308 1070 aa12.36□□□□□ -0.43
CCDC90B-217ENST00000530253 MSL1Q68DK7 614 aa12.36□□□□□ -0.43
CCDC90B-217ENST00000530253 NBPF11Q86T75 865 aa12.36□□□□□ -0.43
CCDC90B-217ENST00000530253 DMRTC2Q8IXT2 367 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-217ENST00000530253 MSH6P52701 1360 aa12.35□□□□□ -0.43
CCDC90B-217ENST00000530253 SBNO2Q9Y2G9 1366 aa12.35□□□□□ -0.43
CCDC90B-217ENST00000530253 IDH3AP50213 366 aa12.35□□□□□ -0.43
CCDC90B-217ENST00000530253 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
CCDC90B-217ENST00000530253 ILDR2Q71H61 639 aa12.35□□□□□ -0.43
CCDC90B-217ENST00000530253 TP53INP1Q96A56 240 aa12.35□□□□□ -0.43
CCDC90B-217ENST00000530253 TULP4Q9NRJ4 1543 aa12.35□□□□□ -0.43
CCDC90B-217ENST00000530253 CENPJQ9HC77 1338 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-217ENST00000530253 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 EIF3AQ14152 1382 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 USP47Q96K76 1375 aa12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 INPP5BP32019 993 aa12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 CRTC2Q53ET0 693 aaPredicted RBP12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 ANKMY2Q8IV38 441 aa12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 VTI1AQ96AJ9 217 aa12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 BCS1LQ9Y276 419 aa12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 MST1RQ04912 1400 aa12.34□□□□□ -0.43
CCDC90B-217ENST00000530253 USP17L15C9J2P7 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L10C9JJH3 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L13C9JLJ4 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L11C9JVI0 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L21D6R901 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L18D6R9N7 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L22D6RA61 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L17D6RBQ6 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L19D6RCP7 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L20D6RJB6 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 FOXO3O43524 673 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 CPB1P15086 417 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP17L24Q0WX57 530 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 LRP8Q14114 963 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 ELMSAN1Q6PJG2 1045 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 DHX32Q7L7V1 743 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 CALR3Q96L12 384 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 PPP1R12CQ9BZL4 782 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 C19orf44Q9H6X5 657 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
CCDC90B-217ENST00000530253 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
CCDC90B-217ENST00000530253 SAFB2Q14151 953 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC90B-217ENST00000530253 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
CCDC90B-217ENST00000530253 TRPM4Q8TD43 1214 aa12.32□□□□□ -0.44
CCDC90B-217ENST00000530253 TTC9Q92623 222 aa12.32□□□□□ -0.44
CCDC90B-217ENST00000530253 POGKQ9P215 609 aa12.32□□□□□ -0.44
CCDC90B-217ENST00000530253 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
CCDC90B-217ENST00000530253 GPLD1P80108 840 aa12.31□□□□□ -0.44
CCDC90B-217ENST00000530253 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
CCDC90B-217ENST00000530253 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
CCDC90B-217ENST00000530253 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
CCDC90B-217ENST00000530253 TESK2Q96S53 571 aa12.31□□□□□ -0.44
CCDC90B-217ENST00000530253 LPIN3Q9BQK8 851 aa12.31□□□□□ -0.44
CCDC90B-217ENST00000530253 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
CCDC90B-217ENST00000530253 ATP7BP35670 1465 aa12.3□□□□□ -0.44
CCDC90B-217ENST00000530253 C1orf167Q5SNV9 1468 aa12.3□□□□□ -0.44
CCDC90B-217ENST00000530253 RARAP10276 462 aa12.3□□□□□ -0.44
CCDC90B-217ENST00000530253 DGKZQ13574 1117 aa12.3□□□□□ -0.44
CCDC90B-217ENST00000530253 KLK14Q9P0G3 267 aa12.3□□□□□ -0.44
CCDC90B-217ENST00000530253 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
CCDC90B-217ENST00000530253 ST20-MTHFSA0A0A6YYL1 179 aa12.29□□□□□ -0.44
CCDC90B-217ENST00000530253 HIRIP3Q9BW71 556 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-217ENST00000530253 SSBP4Q9BWG4 385 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-217ENST00000530253 SLAIN2Q9P270 581 aa12.29□□□□□ -0.44
CCDC90B-217ENST00000530253 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
CCDC90B-217ENST00000530253 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
CCDC90B-217ENST00000530253 C11orf91Q3C1V1 193 aa12.28□□□□□ -0.44
CCDC90B-217ENST00000530253 PERM1Q5SV97 790 aa12.28□□□□□ -0.44
CCDC90B-217ENST00000530253 IGF2-ASQ6U949 168 aa12.28□□□□□ -0.44
CCDC90B-217ENST00000530253 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
CCDC90B-217ENST00000530253 MYO19Q96H55 970 aa12.28□□□□□ -0.44
CCDC90B-217ENST00000530253 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
CCDC90B-217ENST00000530253 MICAL2O94851 1124 aa12.27□□□□□ -0.45
CCDC90B-217ENST00000530253 ATF3P18847 181 aa12.27□□□□□ -0.45
CCDC90B-217ENST00000530253 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-217ENST00000530253 GRNP28799 593 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms