RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 CSF1RP07333 972 aa10.93□□□□□ -0.66
TGFBR3-208ENST00000529608 CHRNDQ07001 517 aa10.93□□□□□ -0.66
TGFBR3-208ENST00000529608 CD209Q9NNX6 404 aa10.93□□□□□ -0.66
TGFBR3-208ENST00000529608 LEMD3Q9Y2U8 911 aa10.93□□□□□ -0.66
TGFBR3-208ENST00000529608 ZSWIM8A7E2V4 1837 aa10.93□□□□□ -0.66
TGFBR3-208ENST00000529608 GJA5P36382 358 aa10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 SREBF2Q12772 1141 aa10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 GCKRQ14397 625 aa10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 ARMC9Q7Z3E5 817 aa10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 APOBEC3FQ8IUX4 373 aaKnown RBP10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 HELBQ8NG08 1087 aaPredicted RBP10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 PLA2G12BQ9BX93 195 aa10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 DEFB129Q9H1M3 183 aa10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 CENPFP49454 3210 aa10.92□□□□□ -0.66
TGFBR3-208ENST00000529608 BRCA2P51587 3418 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 F8W031 263 aaPredicted RBP10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 PPP1R37O75864 691 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 NF2P35240 595 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 IGHMBP2P38935 993 aaKnown RBP10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 TWISTNBQ3B726 338 aaPredicted RBP10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 NBPF12Q5TAG4 269 aaPredicted RBP10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 OTOP1Q7RTM1 612 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 WNK4Q96J92 1243 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 PRMT6Q96LA8 375 aaPredicted RBP10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 JAG2Q9Y219 1238 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 ARAP2Q8WZ64 1704 aa10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 COL1A1P02452 1464 aaPredicted RBP10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 MKI67P46013 3256 aaKnown RBP10.91□□□□□ -0.66
TGFBR3-208ENST00000529608 FOXO4P98177 505 aa10.9□□□□□ -0.66
TGFBR3-208ENST00000529608 NEXNQ0ZGT2 675 aa10.9□□□□□ -0.66
TGFBR3-208ENST00000529608 CDAN1Q8IWY9 1227 aa10.9□□□□□ -0.66
TGFBR3-208ENST00000529608 MTMR14Q8NCE2 650 aa10.9□□□□□ -0.66
TGFBR3-208ENST00000529608 PTPN18Q99952 460 aa10.9□□□□□ -0.66
TGFBR3-208ENST00000529608 ANKRD2Q9GZV1 360 aa10.9□□□□□ -0.66
TGFBR3-208ENST00000529608 MRS2Q9HD23 443 aa10.9□□□□□ -0.66
TGFBR3-208ENST00000529608 TRIM17Q9Y577 477 aa10.9□□□□□ -0.66
TGFBR3-208ENST00000529608 CACNA1FO60840 1977 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 USP2O75604 605 aaPredicted RBP10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 FLIIQ13045 1269 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 DLGAP5Q15398 846 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 CFAP100Q494V2 611 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 EPHA10Q5JZY3 1008 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 SLC10A4Q96EP9 437 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 MPHOSPH8Q99549 860 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 STK31Q9BXU1 1019 aa10.89□□□□□ -0.67
TGFBR3-208ENST00000529608 MANSC4A6NHS7 340 aaPredicted RBP10.88□□□□□ -0.67
TGFBR3-208ENST00000529608 IL1R1P14778 569 aa10.88□□□□□ -0.67
TGFBR3-208ENST00000529608 HNRNPUQ00839 825 aaKnown RBP eCLIP10.88□□□□□ -0.67
TGFBR3-208ENST00000529608 CRHR2Q13324 411 aa10.88□□□□□ -0.67
TGFBR3-208ENST00000529608 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
TGFBR3-208ENST00000529608 C15orf52Q6ZUT6 534 aaKnown RBP10.88□□□□□ -0.67
TGFBR3-208ENST00000529608 WWC1Q8IX03 1113 aa10.88□□□□□ -0.67
TGFBR3-208ENST00000529608 DNAAF4Q8WXU2 420 aa10.88□□□□□ -0.67
TGFBR3-208ENST00000529608 F6X3S4 739 aa10.87□□□□□ -0.67
TGFBR3-208ENST00000529608 ALDH1A1P00352 501 aa10.87□□□□□ -0.67
TGFBR3-208ENST00000529608 ZBTB48P10074 688 aaPredicted RBP10.87□□□□□ -0.67
TGFBR3-208ENST00000529608 KCNJ4P48050 445 aa10.87□□□□□ -0.67
TGFBR3-208ENST00000529608 MMP14P50281 582 aa10.87□□□□□ -0.67
TGFBR3-208ENST00000529608 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
TGFBR3-208ENST00000529608 VEZTQ9HBM0 779 aa10.87□□□□□ -0.67
TGFBR3-208ENST00000529608 PTPN22Q9Y2R2 807 aa10.87□□□□□ -0.67
TGFBR3-208ENST00000529608 ANKRD18BA2A2Z9 1011 aa10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 TESPA1A2RU30 521 aaPredicted RBP10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 EN2P19622 333 aaPredicted RBP10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 INHBEP58166 350 aa10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 FKBP5Q13451 457 aaPredicted RBP10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 RASA3Q14644 834 aa10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 GRIK5Q16478 980 aa10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 CCDC27Q2M243 656 aa10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 TEPSINQ96N21 525 aa10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 PPP2R3BQ9Y5P8 575 aa10.86□□□□□ -0.67
TGFBR3-208ENST00000529608 FANCIQ9NVI1 1328 aa10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 PPP1R12BO60237 982 aaPredicted RBP10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 PLIN1O60240 522 aa10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 VAMP4O75379 141 aa10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 FKBP1AP62942 108 aaKnown RBP10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 HABP4Q5JVS0 413 aaKnown RBP10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 BEND3Q5T5X7 828 aa10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 LMBR1LQ6UX01 489 aa10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
TGFBR3-208ENST00000529608 GYG1P46976 350 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 IFIT5Q13325 482 aaKnown RBP10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 LCE2DQ5TA82 110 aaPredicted RBP10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 ZNF804AQ7Z570 1209 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 FAM9BQ8IZU0 186 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 BRI3BPQ8WY22 251 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 ARMC5Q96C12 935 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 OPTNQ96CV9 577 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 CHMP4AQ9BY43 222 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 PUS3Q9BZE2 481 aaKnown RBP10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 TDRD3Q9H7E2 651 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms