RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 MYH13Q9UKX3 1938 aa19.84■□□□□ 0.77
TSPAN4-218ENST00000529566 PRDX5P30044 214 aa19.84■□□□□ 0.77
TSPAN4-218ENST00000529566 RBM5P52756 815 aaKnown RBP eCLIP19.84■□□□□ 0.77
TSPAN4-218ENST00000529566 GORABQ5T7V8 394 aa19.84■□□□□ 0.77
TSPAN4-218ENST00000529566 PI16Q6UXB8 463 aa19.84■□□□□ 0.77
TSPAN4-218ENST00000529566 CDCA5Q96FF9 252 aa19.84■□□□□ 0.77
TSPAN4-218ENST00000529566 RASSF10A6NK89 507 aa19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 RAB11FIP3O75154 756 aa19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 MCAMP43121 646 aa19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 APOBEC3HQ6NTF7 200 aaKnown RBP19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 HHIPL2Q6UWX4 724 aa19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 SPATA5Q8NB90 893 aa19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 ZNF512BQ96KM6 892 aaPredicted RBP19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 ZDHHC15Q96MV8 337 aa19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 CCDC8Q9H0W5 538 aaPredicted RBP19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 TLL2Q9Y6L7 1015 aa19.83■□□□□ 0.77
TSPAN4-218ENST00000529566 CNTNAP1P78357 1384 aa19.83■□□□□ 0.76
TSPAN4-218ENST00000529566 CLRN2A0PK11 232 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 UQCRFS1P1P0C7P4 283 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 SPDYE2Q495Y8 402 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 PRAMEF18Q5VWM3 479 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 SAPCD2Q86UD0 394 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 APOBEC3FQ8IUX4 373 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 TEKT1Q969V4 418 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 KIF1BPQ96EK5 621 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 ZNF408Q9H9D4 720 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 IL1RAPL2Q9NP60 686 aa19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 MKRN1Q9UHC7 482 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-218ENST00000529566 MAST3O60307 1309 aa19.81■□□□□ 0.76
TSPAN4-218ENST00000529566 LDHBP07195 334 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-218ENST00000529566 JMYQ8N9B5 988 aa19.81■□□□□ 0.76
TSPAN4-218ENST00000529566 TDRD3Q9H7E2 651 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-218ENST00000529566 ZNF70Q9UC06 446 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-218ENST00000529566 ABT1Q9ULW3 272 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-218ENST00000529566 APBB1O00213 710 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 MYO1BO43795 1136 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 DIXDC1Q155Q3 683 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 CCDC158Q5M9N0 1113 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 AACSQ86V21 672 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 ZGPATQ8N5A5 531 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 ZNF384Q8TF68 577 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 DEFB129Q9H1M3 183 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 DCTPP1Q9H773 170 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 SUPT16HQ9Y5B9 1047 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 PCNTO95613 3336 aa19.8■□□□□ 0.76
TSPAN4-218ENST00000529566 ECM29Q5VYK3 1845 aa19.79■□□□□ 0.76
TSPAN4-218ENST00000529566 VEGFBP49765 207 aa19.79■□□□□ 0.76
TSPAN4-218ENST00000529566 DEFB115Q30KQ5 88 aa19.79■□□□□ 0.76
TSPAN4-218ENST00000529566 TTC39AQ5SRH9 613 aa19.79■□□□□ 0.76
TSPAN4-218ENST00000529566 TBC1D9Q6ZT07 1266 aa19.79■□□□□ 0.76
TSPAN4-218ENST00000529566 GBA2Q9HCG7 927 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-218ENST00000529566 DAGLAQ9Y4D2 1042 aa19.79■□□□□ 0.76
TSPAN4-218ENST00000529566 AKAP11Q9UKA4 1901 aa19.78■□□□□ 0.76
TSPAN4-218ENST00000529566 HHIPL1Q96JK4 782 aa19.78■□□□□ 0.76
TSPAN4-218ENST00000529566 SNRKQ9NRH2 765 aa19.78■□□□□ 0.76
TSPAN4-218ENST00000529566 ABCF2Q9UG63 623 aa19.78■□□□□ 0.76
TSPAN4-218ENST00000529566 SPTY2D1Q68D10 685 aaPredicted RBP19.77■□□□□ 0.76
TSPAN4-218ENST00000529566 CLASRPQ8N2M8 674 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-218ENST00000529566 FAM163AQ96GL9 167 aaPredicted RBP19.77■□□□□ 0.76
TSPAN4-218ENST00000529566 VEZTQ9HBM0 779 aa19.77■□□□□ 0.76
TSPAN4-218ENST00000529566 PPP2R3BQ9Y5P8 575 aa19.77■□□□□ 0.76
TSPAN4-218ENST00000529566 GAKO14976 1311 aa19.76■□□□□ 0.75
TSPAN4-218ENST00000529566 CYP2E1P05181 493 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-218ENST00000529566 MECOMQ03112 1051 aa19.76■□□□□ 0.75
TSPAN4-218ENST00000529566 RASA3Q14644 834 aa19.76■□□□□ 0.75
TSPAN4-218ENST00000529566 C2orf69Q8N8R5 385 aa19.76■□□□□ 0.75
TSPAN4-218ENST00000529566 ZAP70P43403 619 aa19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 HUNKP57058 714 aa19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 FKBP1BP68106 108 aa19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 FKBP1CQ5VVH2 108 aa19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 CDC42EP5Q6NZY7 148 aa19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 ERICH6Q7L0X2 663 aa19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 NSUN4Q96CB9 384 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 TEPSINQ96N21 525 aa19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 LRRCC1Q9C099 1032 aa19.75■□□□□ 0.75
TSPAN4-218ENST00000529566 TCP10L2B9ZVM9 353 aa19.74■□□□□ 0.75
TSPAN4-218ENST00000529566 SMARCA5O60264 1052 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-218ENST00000529566 CACNB3P54284 484 aa19.74■□□□□ 0.75
TSPAN4-218ENST00000529566 AAMPQ13685 434 aa19.74■□□□□ 0.75
TSPAN4-218ENST00000529566 MOB2Q70IA6 237 aa19.74■□□□□ 0.75
TSPAN4-218ENST00000529566 DZIP1Q86YF9 867 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-218ENST00000529566 WDR33Q9C0J8 1336 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-218ENST00000529566 IFIT2P09913 472 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 TNFAIP1Q13829 316 aa19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 NBPF12Q5TAG4 269 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 CYP4F22Q6NT55 531 aa19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 CDAN1Q8IWY9 1227 aa19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 EXOC6Q8TAG9 804 aa19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 CAPNS2Q96L46 248 aa19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 PIH1D3Q9NQM4 214 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 SSC5DA1L4H1 1573 aa19.73■□□□□ 0.75
TSPAN4-218ENST00000529566 TMEM39BQ9GZU3 492 aa19.72■□□□□ 0.75
TSPAN4-218ENST00000529566 NDUFB9Q9Y6M9 179 aa19.72■□□□□ 0.75
TSPAN4-218ENST00000529566 MYH2Q9UKX2 1941 aa19.72■□□□□ 0.75
TSPAN4-218ENST00000529566 PAPPA2Q9BXP8 1791 aa19.72■□□□□ 0.75
TSPAN4-218ENST00000529566 GPR75-ASB3A0A0A6YYF3 556 aa19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 UBE2Q2LH0YL09 131 aa19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 HDAC1Q13547 482 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 FAM83AQ86UY5 434 aa19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 SLF2Q8IX21 1173 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms