RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 NPHP1O15259 732 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 CTDNEP1O95476 244 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 ZMYM1Q5SVZ6 1142 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 IFFO2Q5TF58 517 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 NSUN7Q8NE18 718 aaKnown RBP18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 DSCC1Q9BVC3 393 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 CBX8Q9HC52 389 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 HMGB1P09429 215 aaKnown RBP18.52■□□□□ 0.56
TM9SF1-208ENST00000529332 FGD1P98174 961 aa18.52■□□□□ 0.56
TM9SF1-208ENST00000529332 EXOSC10Q01780 885 aaKnown RBP18.52■□□□□ 0.56
TM9SF1-208ENST00000529332 BICD2Q8TD16 824 aa18.52■□□□□ 0.56
TM9SF1-208ENST00000529332 PYCARDQ9ULZ3 195 aa18.52■□□□□ 0.56
TM9SF1-208ENST00000529332 ADD1P35611 737 aaKnown RBP18.52■□□□□ 0.55
TM9SF1-208ENST00000529332 APOBRQ0VD83 1088 aa18.52■□□□□ 0.55
TM9SF1-208ENST00000529332 AKT1S1Q96B36 256 aa18.52■□□□□ 0.55
TM9SF1-208ENST00000529332 LLPHQ9BRT6 129 aaKnown RBP18.52■□□□□ 0.55
TM9SF1-208ENST00000529332 ZSCAN16Q9H4T2 348 aaPredicted RBP18.52■□□□□ 0.55
TM9SF1-208ENST00000529332 RIC1Q4ADV7 1423 aa18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 HSPD1P10809 573 aaKnown RBP18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 GYS1P13807 737 aa18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 NFIXQ14938 502 aa18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 MYRIPQ8NFW9 859 aa18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 KIAA1524Q8TCG1 905 aa18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 AGXT2Q9BYV1 514 aa18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 RIPOR2Q9Y4F9 1068 aa18.51■□□□□ 0.55
TM9SF1-208ENST00000529332 ABCC12Q96J65 1359 aa18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 MAST3O60307 1309 aa18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 IGHMBP2P38935 993 aaKnown RBP18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 MPHOSPH8Q99549 860 aa18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 MROH5Q6ZUA9 1318 aa18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 FOSBP53539 338 aa18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 ZNF827Q17R98 1081 aa18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 GLIPR1L2Q4G1C9 344 aa18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 NLRP3Q96P20 1036 aa18.5■□□□□ 0.55
TM9SF1-208ENST00000529332 A0A1B0GUL7 405 aa18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 PTPDC1A2A3K4 754 aa18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 E7EWF7 191 aa18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 TPM3P06753 285 aa18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 IFIT1P09914 478 aaKnown RBP18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 CEBPZQ03701 1054 aaKnown RBP18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 CNBD1Q8NA66 436 aa18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 FTOQ9C0B1 505 aaKnown RBP eCLIP18.49■□□□□ 0.556e-6■□□□□ 9
TM9SF1-208ENST00000529332 CFAP45Q9UL16 551 aa18.49■□□□□ 0.55
TM9SF1-208ENST00000529332 M0R2C6 588 aa18.48■□□□□ 0.55
TM9SF1-208ENST00000529332 RNF113AO15541 343 aaKnown RBP18.48■□□□□ 0.55
TM9SF1-208ENST00000529332 NCOA5Q9HCD5 579 aaKnown RBP18.48■□□□□ 0.55
TM9SF1-208ENST00000529332 MYH15Q9Y2K3 1946 aa18.48■□□□□ 0.55
TM9SF1-208ENST00000529332 SALL1Q9NSC2 1324 aa18.48■□□□□ 0.55
TM9SF1-208ENST00000529332 GOLGA6L6A8MZA4 724 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 PTGS1P23219 599 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 CHST3Q7LGC8 479 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 TICAM2Q86XR7 235 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 TDRD7Q8NHU6 1098 aaKnown RBP18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 DNAJC25Q9H1X3 360 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 SEC31BQ9NQW1 1179 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 ARAP2Q8WZ64 1704 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 PPFIA3O75145 1194 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 ATP2B3Q16720 1220 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 TTLL5Q6EMB2 1281 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 RCOR1Q9UKL0 485 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 QSER1Q2KHR3 1735 aa18.47■□□□□ 0.55
TM9SF1-208ENST00000529332 PDIA3P30101 505 aaKnown RBP18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 HMGN5P82970 282 aaKnown RBP18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 GORABQ5T7V8 394 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 MAP7D2Q96T17 732 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 TNRC6CQ9HCJ0 1690 aaKnown RBP18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 PDE8BO95263 885 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 BAG6P46379 1132 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 ZNF165P49910 485 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 ST5P78524 1137 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 PLA2G4DQ86XP0 818 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 CAMKK2Q96RR4 588 aa18.46■□□□□ 0.55
TM9SF1-208ENST00000529332 TM4SF1P30408 202 aa18.45■□□□□ 0.54
TM9SF1-208ENST00000529332 ZNF75DP51815 510 aa18.45■□□□□ 0.54
TM9SF1-208ENST00000529332 NLGN1Q8N2Q7 840 aa18.45■□□□□ 0.54
TM9SF1-208ENST00000529332 VGLL2Q8N8G2 317 aa18.45■□□□□ 0.54
TM9SF1-208ENST00000529332 USP28Q96RU2 1077 aa18.45■□□□□ 0.54
TM9SF1-208ENST00000529332 GOLPH3LQ9H4A5 285 aa18.45■□□□□ 0.54
TM9SF1-208ENST00000529332 FOXP2O15409 715 aa18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 ADORA1P30542 326 aa18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 CCDC158Q5M9N0 1113 aa18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 C3orf67Q6ZVT6 689 aa18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 TSC1Q92574 1164 aa18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 NAP1L2Q9ULW6 460 aaPredicted RBP18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 A0A1B0GUL6 1792 aa18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 SERPINB2P05120 415 aa18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 GTF2F1P35269 517 aaKnown RBP eCLIP18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 FKBP4Q02790 459 aaKnown RBP eCLIP18.44■□□□□ 0.54
TM9SF1-208ENST00000529332 EN1Q05925 392 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms