RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 F8W031 263 aaPredicted RBP29.8■■■□□ 2.36
LDLRAD3-203ENST00000528989 UBE3CQ15386 1083 aa29.8■■■□□ 2.36
LDLRAD3-203ENST00000528989 ZSCAN25Q6NSZ9 544 aa29.8■■■□□ 2.36
LDLRAD3-203ENST00000528989 M0R2C6 588 aa29.8■■■□□ 2.36
LDLRAD3-203ENST00000528989 LRRFIP1Q32MZ4 808 aaKnown RBP29.8■■■□□ 2.36
LDLRAD3-203ENST00000528989 SPTY2D1Q68D10 685 aaPredicted RBP29.8■■■□□ 2.36
LDLRAD3-203ENST00000528989 PSMD14O00487 310 aa29.79■■■□□ 2.36
LDLRAD3-203ENST00000528989 CYP7A1P22680 504 aa29.79■■■□□ 2.36
LDLRAD3-203ENST00000528989 CXCL9Q07325 125 aa29.79■■■□□ 2.36
LDLRAD3-203ENST00000528989 DIXDC1Q155Q3 683 aa29.79■■■□□ 2.36
LDLRAD3-203ENST00000528989 MCMDC2Q4G0Z9 681 aa29.78■■■□□ 2.36
LDLRAD3-203ENST00000528989 NAA16Q6N069 864 aaPredicted RBP29.78■■■□□ 2.36
LDLRAD3-203ENST00000528989 TICAM2Q86XR7 235 aa29.78■■■□□ 2.36
LDLRAD3-203ENST00000528989 DZIP1Q86YF9 867 aaKnown RBP29.78■■■□□ 2.36
LDLRAD3-203ENST00000528989 APPBP2Q92624 585 aa29.78■■■□□ 2.36
LDLRAD3-203ENST00000528989 DOCK2Q92608 1830 aa29.78■■■□□ 2.36
LDLRAD3-203ENST00000528989 LMNB1P20700 586 aa29.78■■■□□ 2.36
LDLRAD3-203ENST00000528989 RUFY2Q8WXA3 655 aa29.78■■■□□ 2.36
LDLRAD3-203ENST00000528989 MAST3O60307 1309 aa29.77■■■□□ 2.36
LDLRAD3-203ENST00000528989 MIGA1Q8NAN2 632 aa29.77■■■□□ 2.36
LDLRAD3-203ENST00000528989 HELLSQ9NRZ9 838 aa29.77■■■□□ 2.36
LDLRAD3-203ENST00000528989 ZBTB12Q9Y330 459 aaPredicted RBP29.77■■■□□ 2.36
LDLRAD3-203ENST00000528989 KIAA0825Q8IV33 1275 aa29.76■■■□□ 2.35
LDLRAD3-203ENST00000528989 VIL1P09327 827 aaKnown RBP29.75■■■□□ 2.35
LDLRAD3-203ENST00000528989 ANO2Q9NQ90 1003 aa29.75■■■□□ 2.35
LDLRAD3-203ENST00000528989 TTF2Q9UNY4 1162 aaKnown RBP29.75■■■□□ 2.35
LDLRAD3-203ENST00000528989 FZD9O00144 591 aa29.74■■■□□ 2.35
LDLRAD3-203ENST00000528989 SCNN1DP51172 638 aa29.74■■■□□ 2.35
LDLRAD3-203ENST00000528989 FKBP1AP62942 108 aaKnown RBP29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 PTH1RQ03431 593 aa29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 VPS53Q5VIR6 699 aa29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 RSBN1LQ6PCB5 846 aaPredicted RBP29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 SUGT1Q9Y2Z0 365 aa29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 CCDC88AQ3V6T2 1871 aa29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 MYH7P12883 1935 aa29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 GPAA1O43292 621 aa29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 CIAPIN1Q6FI81 312 aa29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 RNF181Q9P0P0 153 aa29.72■■■□□ 2.35
LDLRAD3-203ENST00000528989 MBD4O95243 580 aa29.71■■■□□ 2.35
LDLRAD3-203ENST00000528989 DYNLL1P63167 89 aaKnown RBP29.71■■■□□ 2.35
LDLRAD3-203ENST00000528989 LSG1Q9H089 658 aaKnown RBP29.71■■■□□ 2.35
LDLRAD3-203ENST00000528989 ARMT1Q9H993 441 aa29.71■■■□□ 2.35
LDLRAD3-203ENST00000528989 RAD50Q92878 1312 aa29.71■■■□□ 2.35
LDLRAD3-203ENST00000528989 AIDAQ96BJ3 306 aa29.7■■■□□ 2.35
LDLRAD3-203ENST00000528989 AATFQ9NY61 560 aaKnown RBP eCLIP29.7■■■□□ 2.35
LDLRAD3-203ENST00000528989 ZNF646O15015 1829 aaPredicted RBP29.7■■■□□ 2.35
LDLRAD3-203ENST00000528989 CCDC171Q6TFL3 1326 aa29.7■■■□□ 2.35
LDLRAD3-203ENST00000528989 REC8O95072 547 aa29.7■■■□□ 2.34
LDLRAD3-203ENST00000528989 C9orf131Q5VYM1 1079 aa29.7■■■□□ 2.34
LDLRAD3-203ENST00000528989 LCORLQ8N3X6 602 aa29.7■■■□□ 2.34
LDLRAD3-203ENST00000528989 GMLQ99445 158 aa29.7■■■□□ 2.34
LDLRAD3-203ENST00000528989 USP26Q9BXU7 913 aa29.7■■■□□ 2.34
LDLRAD3-203ENST00000528989 ZNF541Q9H0D2 1346 aa29.69■■■□□ 2.34
LDLRAD3-203ENST00000528989 GRIN3BO60391 1043 aa29.69■■■□□ 2.34
LDLRAD3-203ENST00000528989 STRBPQ96SI9 672 aaKnown RBP29.69■■■□□ 2.34
LDLRAD3-203ENST00000528989 RIOK1Q9BRS2 568 aaKnown RBP29.69■■■□□ 2.34
LDLRAD3-203ENST00000528989 PCDHAC2Q9Y5I4 1007 aa29.69■■■□□ 2.34
LDLRAD3-203ENST00000528989 KIAA1211Q6ZU35 1233 aa29.68■■■□□ 2.34
LDLRAD3-203ENST00000528989 SBF1O95248 1867 aa29.68■■■□□ 2.34
LDLRAD3-203ENST00000528989 MAGEB6P1A0A0J9YX57 407 aa29.68■■■□□ 2.34
LDLRAD3-203ENST00000528989 EIF6P56537 245 aaKnown RBP29.68■■■□□ 2.34
LDLRAD3-203ENST00000528989 GSTO1P78417 241 aa29.68■■■□□ 2.34
LDLRAD3-203ENST00000528989 GJA3Q9Y6H8 435 aa29.68■■■□□ 2.34
LDLRAD3-203ENST00000528989 FOXP2O15409 715 aa29.67■■■□□ 2.34
LDLRAD3-203ENST00000528989 TNIP1Q15025 636 aa29.67■■■□□ 2.34
LDLRAD3-203ENST00000528989 MROH7-TTC4A0A0A0MT08 1334 aa29.67■■■□□ 2.34
LDLRAD3-203ENST00000528989 PRKAB2O43741 272 aa29.66■■■□□ 2.34
LDLRAD3-203ENST00000528989 HSPD1P10809 573 aaKnown RBP29.66■■■□□ 2.34
LDLRAD3-203ENST00000528989 DAGLAQ9Y4D2 1042 aa29.66■■■□□ 2.34
LDLRAD3-203ENST00000528989 FAM163AQ96GL9 167 aaPredicted RBP29.65■■■□□ 2.34
LDLRAD3-203ENST00000528989 SHTN1A0MZ66 631 aa29.65■■■□□ 2.34
LDLRAD3-203ENST00000528989 IGSF3O75054 1194 aa29.65■■■□□ 2.34
LDLRAD3-203ENST00000528989 LDHCP07864 332 aa29.65■■■□□ 2.34
LDLRAD3-203ENST00000528989 BTDP43251 543 aa29.64■■■□□ 2.34
LDLRAD3-203ENST00000528989 CRKP46108 304 aa29.64■■■□□ 2.34
LDLRAD3-203ENST00000528989 GAKO14976 1311 aa29.64■■■□□ 2.33
LDLRAD3-203ENST00000528989 MYO3BQ8WXR4 1341 aa29.64■■■□□ 2.33
LDLRAD3-203ENST00000528989 GPR75-ASB3A0A0A6YYF3 556 aa29.63■■■□□ 2.33
LDLRAD3-203ENST00000528989 AGBL3Q8NEM8 1001 aa29.63■■■□□ 2.33
LDLRAD3-203ENST00000528989 MAP4K1Q92918 833 aa29.63■■■□□ 2.33
LDLRAD3-203ENST00000528989 TEKT1Q969V4 418 aa29.63■■■□□ 2.33
LDLRAD3-203ENST00000528989 PSME4Q14997 1843 aa29.63■■■□□ 2.33
LDLRAD3-203ENST00000528989 SLF2Q8IX21 1173 aa29.63■■■□□ 2.33
LDLRAD3-203ENST00000528989 RBM5P52756 815 aaKnown RBP eCLIP29.62■■■□□ 2.33
LDLRAD3-203ENST00000528989 TMED8Q6PL24 325 aaPredicted RBP29.62■■■□□ 2.33
LDLRAD3-203ENST00000528989 SDR42E1Q8WUS8 393 aa29.62■■■□□ 2.33
LDLRAD3-203ENST00000528989 TSHZ2Q9NRE2 1034 aa29.62■■■□□ 2.33
LDLRAD3-203ENST00000528989 MYH2Q9UKX2 1941 aa29.62■■■□□ 2.33
LDLRAD3-203ENST00000528989 APOBEC3HQ6NTF7 200 aaKnown RBP29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 HHIPL2Q6UWX4 724 aa29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 SH3RF3Q8TEJ3 882 aaPredicted RBP29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 C22orf23Q9BZE7 217 aa29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 UPF2Q9HAU5 1272 aaKnown RBP29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 SLC4A4Q9Y6R1 1079 aa29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 APPP05067 770 aa29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 USP17L8P0C7I0 530 aa29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 GMPSP49915 693 aaPredicted RBP29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 MAST2Q6P0Q8 1798 aa29.61■■■□□ 2.33
LDLRAD3-203ENST00000528989 PPP4CP60510 307 aa29.6■■■□□ 2.33
LDLRAD3-203ENST00000528989 MRIQ9BWK5 157 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms