RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SNAP23O00161 211 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 GNAT2P19087 354 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 ZAP70P43403 619 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 RGS3P49796 1198 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 TNFAIP1Q13829 316 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 DLGAP5Q15398 846 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 SLC9C2Q5TAH2 1124 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 AMOTL1Q8IY63 956 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 RILPL2Q969X0 211 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 HOOK2Q96ED9 719 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 FAM163AQ96GL9 167 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-211ENST00000528787 GPR101Q96P66 508 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-211ENST00000528787 DIAPH3Q9NSV4 1193 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 HACL1Q9UJ83 578 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 IQSEC3Q9UPP2 1182 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-211ENST00000528787 RAD50Q92878 1312 aa9.56□□□□□ -0.88
SSBP3-211ENST00000528787 SCN9AQ15858 1988 aa9.55□□□□□ -0.88
SSBP3-211ENST00000528787 RPAP1Q9BWH6 1393 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 ECM29Q5VYK3 1845 aa9.55□□□□□ -0.88
SSBP3-211ENST00000528787 YDJCA8MPS7 323 aa9.55□□□□□ -0.88
SSBP3-211ENST00000528787 CYP2E1P05181 493 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 VEGFAP15692 232 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 TNNI2P48788 182 aa9.55□□□□□ -0.88
SSBP3-211ENST00000528787 RBM5P52756 815 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 USP50Q70EL3 339 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 C16orf71Q8IYS4 520 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 ZC3H15Q8WU90 426 aaKnown RBP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 HELLSQ9NRZ9 838 aa9.55□□□□□ -0.88
SSBP3-211ENST00000528787 ADARB2Q9NS39 739 aaKnown RBP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
SSBP3-211ENST00000528787 CNOT7Q9UIV1 285 aaKnown RBP9.55□□□□□ -0.88
SSBP3-211ENST00000528787 WDR90Q96KV7 1748 aa9.55□□□□□ -0.88
SSBP3-211ENST00000528787 RNF113AO15541 343 aaKnown RBP9.54□□□□□ -0.88
SSBP3-211ENST00000528787 CDC45O75419 566 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 NT5C2P49902 561 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 ZNF280AP59817 542 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-211ENST00000528787 KIAA1211Q6ZU35 1233 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 KIAA0825Q8IV33 1275 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 APPBP2Q92624 585 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 AIDAQ96BJ3 306 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 ZDHHC15Q96MV8 337 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 NACAP1Q9BZK3 213 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-211ENST00000528787 SRCAPQ6ZRS2 3230 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 MROH7-TTC4A0A0A0MT08 1334 aa9.54□□□□□ -0.88
SSBP3-211ENST00000528787 EPB41L2O43491 1005 aaKnown RBP9.53□□□□□ -0.88
SSBP3-211ENST00000528787 PDE6AP16499 860 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 CYP7A1P22680 504 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 PDE4AP27815 886 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 ADD2P35612 726 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 CRKP46108 304 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 GMPSP49915 693 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-211ENST00000528787 MECOMQ03112 1051 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 MCMDC2Q4G0Z9 681 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 FKBP1CQ5VVH2 108 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 APOBEC3FQ8IUX4 373 aaKnown RBP9.53□□□□□ -0.88
SSBP3-211ENST00000528787 MICALL2Q8IY33 904 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 MAGEB6Q8N7X4 407 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 NSUN4Q96CB9 384 aaKnown RBP9.53□□□□□ -0.88
SSBP3-211ENST00000528787 GMLQ99445 158 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 CRNKL1Q9BZJ0 848 aaKnown RBP9.53□□□□□ -0.88
SSBP3-211ENST00000528787 MYOZ2Q9NPC6 264 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 PPP2R3BQ9Y5P8 575 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 PITPNM2Q9BZ72 1349 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 ZNF541Q9H0D2 1346 aa9.53□□□□□ -0.88
SSBP3-211ENST00000528787 COL1A1P02452 1464 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-211ENST00000528787 GOLGB1Q14789 3259 aaKnown RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 GPR75-ASB3A0A0A6YYF3 556 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 MAGEB6P1A0A0J9YX57 407 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 WTIPA6NIX2 430 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 NPM3O75607 178 aaKnown RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 DDNO94850 711 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 REC8O95072 547 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 SDSP20132 328 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 PRDX5P30044 214 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 PPP4CP60510 307 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 SCARF1Q14162 830 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 KIF4BQ2VIQ3 1234 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 OTUD7AQ8TE49 926 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 DCPSQ96C86 337 aaKnown RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 UPF2Q9HAU5 1272 aaKnown RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 ZNF287Q9HBT7 754 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 GAKO14976 1311 aa9.52□□□□□ -0.89
SSBP3-211ENST00000528787 ZNF646O15015 1829 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-211ENST00000528787 SPDYE2BA6NHP3 402 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 F8W031 263 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-211ENST00000528787 SLC3A2P08195 630 aaKnown RBP9.51□□□□□ -0.89
SSBP3-211ENST00000528787 SPDYE6P0CI01 402 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 EPHX2P34913 555 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 CFAP100Q494V2 611 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 IL27Q8NEV9 243 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 DHX36Q9H2U1 1008 aaKnown RBP9.51□□□□□ -0.89
SSBP3-211ENST00000528787 PIH1D3Q9NQM4 214 aaKnown RBP9.51□□□□□ -0.89
SSBP3-211ENST00000528787 ATP8A2Q9NTI2 1148 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 CTNNA3Q9UI47 895 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms