RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	SUGT1	Q9Y2Z0	365 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	SEMA3E	O15041	775 aa		14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	ZBTB22	O15209	634 aa		14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	SLC10A3	P09131	477 aa		14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	ZNF157	P51786	506 aa	Predicted RBP	14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	HDLBP	Q00341	1268 aa	Known RBP	14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	TDRD3	Q9H7E2	651 aa	Known RBP	14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	GNL3L	Q9NVN8	582 aa	Known RBP	14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	AKAP2	Q9Y2D5	859 aa		14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	PPP2R3B	Q9Y5P8	575 aa		14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	SSC5D	A1L4H1	1573 aa		14.56	□□□□□ -0.08
PSMC3-205	ENST00000528362	UBE2Q2L	H0YL09	131 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	CAPN15	O75808	1086 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	PRDX5	P30044	214 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	NF2	P35240	595 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	CTCF	P49711	727 aa	Predicted RBP	14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	G3BP1	Q13283	466 aa	Known RBP eCLIP	14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	RASGRF1	Q13972	1273 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	RASA3	Q14644	834 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	CEP85	Q6P2H3	762 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	TEKT1	Q969V4	418 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	CCDC102A	Q96A19	550 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	XAGE2	Q96GT9	111 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	MRI	Q9BWK5	157 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	MAST3	O60307	1309 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	PAPPA2	Q9BXP8	1791 aa		14.55	□□□□□ -0.08
PSMC3-205	ENST00000528362	HSPA8	P11142	646 aa	Known RBP	14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	MS4A1	P11836	297 aa		14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	TTLL12	Q14166	644 aa	Predicted RBP	14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	MVP	Q14764	893 aa	Known RBP	14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	APOBEC3H	Q6NTF7	200 aa	Known RBP	14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	RASAL3	Q86YV0	1011 aa		14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	ZDHHC15	Q96MV8	337 aa		14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	DENND2A	Q9ULE3	1009 aa		14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	FZD1	Q9UP38	647 aa		14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	SALL1	Q9NSC2	1324 aa		14.54	□□□□□ -0.08
PSMC3-205	ENST00000528362	SURF6	O75683	361 aa	Known RBP	14.53	□□□□□ -0.08
PSMC3-205	ENST00000528362	TNFAIP1	Q13829	316 aa		14.53	□□□□□ -0.08
PSMC3-205	ENST00000528362	PRKG1	Q13976	671 aa		14.53	□□□□□ -0.08
PSMC3-205	ENST00000528362	HHIPL2	Q6UWX4	724 aa		14.53	□□□□□ -0.08
PSMC3-205	ENST00000528362	ARMC9	Q7Z3E5	817 aa		14.53	□□□□□ -0.08
PSMC3-205	ENST00000528362	COG6	Q9Y2V7	657 aa		14.53	□□□□□ -0.08
PSMC3-205	ENST00000528362	NOP58	Q9Y2X3	529 aa	Known RBP	14.53	□□□□□ -0.08
PSMC3-205	ENST00000528362	PDS5A	Q29RF7	1337 aa	Known RBP	14.52	□□□□□ -0.08
PSMC3-205	ENST00000528362	TCP10L2	B9ZVM9	353 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	LBX1	P52954	281 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	CACNB3	P54284	484 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	KIF23	Q02241	960 aa	Predicted RBP	14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	DIXDC1	Q155Q3	683 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	LDLRAD1	Q5T700	205 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	NBPF12	Q5TAG4	269 aa	Predicted RBP	14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	CDAN1	Q8IWY9	1227 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	TEPSIN	Q96N21	525 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	NEUROD6	Q96NK8	337 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	BEGAIN	Q9BUH8	593 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	PRDM10	Q9NQV6	1147 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	DAGLA	Q9Y4D2	1042 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	ARAP2	Q8WZ64	1704 aa		14.52	□□□□□ -0.09
PSMC3-205	ENST00000528362	POLR2A	P24928	1970 aa	Known RBP	14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	LDHB	P07195	334 aa	Known RBP	14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	OS9	Q13438	667 aa	Predicted RBP	14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	MAP3K11	Q16584	847 aa		14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	SUPT20HL1	Q3ZLR7	823 aa		14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	TNNI3K	Q59H18	835 aa		14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	C20orf194	Q5TEA3	1177 aa		14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	TMEM39B	Q9GZU3	492 aa		14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	GPR108	Q9NPR9	543 aa		14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	ZBTB40	Q9NUA8	1239 aa		14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	ANGEL1	Q9UNK9	670 aa	Known RBP	14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	FPGT-TNNI3K	V9GXZ4	949 aa		14.51	□□□□□ -0.09
PSMC3-205	ENST00000528362	CA12	O43570	354 aa		14.5	□□□□□ -0.09
PSMC3-205	ENST00000528362	ARID4A	P29374	1257 aa	Predicted RBP	14.5	□□□□□ -0.09
PSMC3-205	ENST00000528362	PI16	Q6UXB8	463 aa		14.5	□□□□□ -0.09
PSMC3-205	ENST00000528362	HMG20B	Q9P0W2	317 aa		14.5	□□□□□ -0.09
PSMC3-205	ENST00000528362	TSKS	Q9UJT2	592 aa		14.5	□□□□□ -0.09
PSMC3-205	ENST00000528362	DDX19B	Q9UMR2	479 aa		14.5	□□□□□ -0.09
PSMC3-205	ENST00000528362	PPP1R12B	O60237	982 aa	Predicted RBP	14.49	□□□□□ -0.09
PSMC3-205	ENST00000528362	GORAB	Q5T7V8	394 aa		14.49	□□□□□ -0.09
PSMC3-205	ENST00000528362	FKBP1C	Q5VVH2	108 aa		14.49	□□□□□ -0.09
PSMC3-205	ENST00000528362	ZGPAT	Q8N5A5	531 aa	Known RBP	14.49	□□□□□ -0.09
PSMC3-205	ENST00000528362	CSRNP1	Q96S65	589 aa		14.49	□□□□□ -0.09
PSMC3-205	ENST00000528362	DBNDD2	Q9BQY9	259 aa		14.49	□□□□□ -0.09
PSMC3-205	ENST00000528362	TMOD2	Q9NZR1	351 aa		14.49	□□□□□ -0.09
PSMC3-205	ENST00000528362	TNNI2	P48788	182 aa		14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	PDE3A	Q14432	1141 aa		14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	CDC42EP5	Q6NZY7	148 aa		14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	SIRT2	Q8IXJ6	389 aa		14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	SPATA5	Q8NB90	893 aa		14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	CLMN	Q96JQ2	1002 aa		14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	TLR7	Q9NYK1	1049 aa	Known RBP	14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	ABCF2	Q9UG63	623 aa		14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	EXOC6B	Q9Y2D4	811 aa		14.48	□□□□□ -0.09
PSMC3-205	ENST00000528362	GAK	O14976	1311 aa		14.47	□□□□□ -0.09
PSMC3-205	ENST00000528362	USP2	O75604	605 aa	Predicted RBP	14.47	□□□□□ -0.09
PSMC3-205	ENST00000528362	UQCRFS1P1	P0C7P4	283 aa		14.47	□□□□□ -0.09
PSMC3-205	ENST00000528362	MCAM	P43121	646 aa		14.47	□□□□□ -0.09
PSMC3-205	ENST00000528362	MKRN3	Q13064	507 aa	Known RBP	14.47	□□□□□ -0.09
PSMC3-205	ENST00000528362	FAM83A	Q86UY5	434 aa		14.47	□□□□□ -0.09
PSMC3-205	ENST00000528362	DZIP1	Q86YF9	867 aa	Known RBP	14.47	□□□□□ -0.09
PSMC3-205	ENST00000528362	ZNF384	Q8TF68	577 aa		14.47	□□□□□ -0.09

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms