RNA–Protein interactions for RNA: ENST00000528039.5

RBM4-210, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-210	ENST00000528039	TMEM39B	Q9GZU3	492 aa		13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	CNNM1	Q9NRU3	951 aa		13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	PTCH2	Q9Y6C5	1203 aa		13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	KIAA0100	Q14667	2235 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	CCL15-CCL14	A0A0B4J2E2	113 aa		13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	TNFAIP1	Q13829	316 aa		13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	CCL15	Q16663	113 aa		13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	TAF7L	Q5H9L4	462 aa		13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	DZIP1L	Q8IYY4	767 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	FAM43A	Q8N2R8	423 aa		13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	FAM84B	Q96KN1	310 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	PUS3	Q9BZE2	481 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-210	ENST00000528039	GRM8	O00222	908 aa		13.9	□□□□□ -0.18
RBM4-210	ENST00000528039	HIBADH	P31937	336 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-210	ENST00000528039	FXR1	P51114	621 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
RBM4-210	ENST00000528039	EXOSC9	Q06265	439 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-210	ENST00000528039	TAF1C	Q15572	869 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM4-210	ENST00000528039	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
RBM4-210	ENST00000528039	OTUD5	Q96G74	571 aa		13.9	□□□□□ -0.18
RBM4-210	ENST00000528039	MYC	P01106	439 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	CRK	P46108	304 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	GTF2A2	P52657	109 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	CACNB3	P54284	484 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	MAP3K9	P80192	1104 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	UBE4A	Q14139	1066 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	SLC9C1	Q4G0N8	1177 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	TMEM106C	Q9BVX2	250 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	ARHGAP39	Q9C0H5	1083 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	ZFYVE28	Q9HCC9	887 aa		13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	COLQ	Q9Y215	455 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-210	ENST00000528039	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-210	ENST00000528039	KAZALD1	Q96I82	304 aa		13.88	□□□□□ -0.19
RBM4-210	ENST00000528039	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-210	ENST00000528039	SALL2	Q9Y467	1007 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-210	ENST00000528039	ARAP2	Q8WZ64	1704 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	CEP290	O15078	2479 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	SPDYE5	A6NIY4	337 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	TNNI2	P48788	182 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	NCBP3	Q53F19	620 aa	Known RBP	13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	NBPF11	Q86T75	865 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	SH3TC2	Q8TF17	1288 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	SUCLG2	Q96I99	432 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	CSAD	Q9Y600	493 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	SNCAIP	Q9Y6H5	919 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	ZSWIM8	A7E2V4	1837 aa		13.87	□□□□□ -0.19
RBM4-210	ENST00000528039	BTBD19	C9JJ37	291 aa		13.86	□□□□□ -0.19
RBM4-210	ENST00000528039	TLR2	O60603	784 aa		13.86	□□□□□ -0.19
RBM4-210	ENST00000528039	CHAF1A	Q13111	956 aa	Predicted RBP	13.86	□□□□□ -0.19
RBM4-210	ENST00000528039	SLC4A8	Q2Y0W8	1093 aa		13.86	□□□□□ -0.19
RBM4-210	ENST00000528039	FBXO33	Q7Z6M2	555 aa		13.86	□□□□□ -0.19
RBM4-210	ENST00000528039	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.86	□□□□□ -0.19
RBM4-210	ENST00000528039	RIPOR2	Q9Y4F9	1068 aa		13.86	□□□□□ -0.19
RBM4-210	ENST00000528039	IRF6	O14896	467 aa		13.85	□□□□□ -0.19
RBM4-210	ENST00000528039	LACTB	P83111	547 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM4-210	ENST00000528039	ARHGEF6	Q15052	776 aa		13.85	□□□□□ -0.19
RBM4-210	ENST00000528039	SLC4A10	Q6U841	1118 aa		13.85	□□□□□ -0.19
RBM4-210	ENST00000528039	WDR63	Q8IWG1	891 aa		13.85	□□□□□ -0.19
RBM4-210	ENST00000528039	WRNIP1	Q96S55	665 aa		13.85	□□□□□ -0.19
RBM4-210	ENST00000528039	CACNA1F	O60840	1977 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039		H0YGN5	161 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	ALDH1L1	O75891	902 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	ECM2	O94769	699 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	CETP	P11597	493 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	CTGF	P29279	349 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	LRRC24	Q50LG9	513 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	ERO1B	Q86YB8	467 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	SRCIN1	Q9C0H9	1055 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	MROH5	Q6ZUA9	1318 aa		13.84	□□□□□ -0.19
RBM4-210	ENST00000528039	HDLBP	Q00341	1268 aa	Known RBP	13.83	□□□□□ -0.2
RBM4-210	ENST00000528039	DIEXF	Q68CQ4	756 aa	Known RBP	13.83	□□□□□ -0.2
RBM4-210	ENST00000528039	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.83	□□□□□ -0.2
RBM4-210	ENST00000528039	VPS37D	Q86XT2	251 aa		13.83	□□□□□ -0.2
RBM4-210	ENST00000528039	VGLL2	Q8N8G2	317 aa		13.83	□□□□□ -0.2
RBM4-210	ENST00000528039	TEKT1	Q969V4	418 aa		13.83	□□□□□ -0.2
RBM4-210	ENST00000528039	ZDHHC15	Q96MV8	337 aa		13.83	□□□□□ -0.2
RBM4-210	ENST00000528039	BICC1	Q9H694	974 aa	Known RBP	13.83	□□□□□ -0.2
RBM4-210	ENST00000528039	BCAM	P50895	628 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	PPIL2	Q13356	520 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	SNAPC2	Q13487	334 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	MTFR1	Q15390	333 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	C17orf99	Q6UX52	265 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	FAM83A	Q86UY5	434 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	TBC1D22A	Q8WUA7	517 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	SHISA4	Q96DD7	197 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	ZCCHC17	Q9NP64	241 aa	Known RBP	13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	UTY	O14607	1347 aa		13.82	□□□□□ -0.2
RBM4-210	ENST00000528039	TRIOBP	Q9H2D6	2365 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	FRAT2	O75474	233 aa	Predicted RBP	13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	INPP5B	P32019	993 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	KIF22	Q14807	665 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	RABL6	Q3YEC7	729 aa	Predicted RBP	13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	CAVIN4	Q5BKX8	364 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	METTL24	Q5JXM2	366 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	MIGA2	Q7L4E1	593 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	ANKRD44	Q8N8A2	993 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	KLHDC4	Q8TBB5	520 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	TRIM47	Q96LD4	638 aa		13.81	□□□□□ -0.2

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